Variant report

Variant	nsv889405
Chromosome Location	chr7:149458623-149500992
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1468)
CpG islands
(count:2381)
Chromatin interactive
region (count:79)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1468 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:149468988-149469116	K562	blood:	n/a	n/a
2	ARID3A	chr7:149458374-149458711	K562	blood:	n/a	n/a
3	ARID3A	chr7:149497005-149497192	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:149487148-149487379	K562	blood:	n/a	n/a
5	ATF3	chr7:149487245-149487558	K562	blood:	n/a	n/a
6	BACH1	chr7:149487050-149487759	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr7:149484599-149484951	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr7:149470828-149470909	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr7:149471378-149471536	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr7:149470146-149470517	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr7:149459668-149459749	K562	blood:	n/a	n/a
12	BACH1	chr7:149468291-149468689	K562	blood:	n/a	n/a
13	BACH1	chr7:149461687-149463251	H1-hESC	embryonic stem cell:	n/a	n/a
14	BCLAF1	chr7:149468749-149469265	K562	blood:	n/a	chr7:149468998-149469007
15	BHLHE40	chr7:149496880-149497163	K562	blood:	n/a	n/a
16	BHLHE40	chr7:149469561-149469696	K562	blood:	n/a	n/a
17	BHLHE40	chr7:149489080-149489398	K562	blood:	n/a	n/a
18	BHLHE40	chr7:149480644-149480682	K562	blood:	n/a	n/a
19	BHLHE40	chr7:149485665-149486197	K562	blood:	n/a	n/a
20	BHLHE40	chr7:149473430-149473809	K562	blood:	n/a	n/a
21	BHLHE40	chr7:149470761-149470937	K562	blood:	n/a	n/a
22	BHLHE40	chr7:149460320-149460321	K562	blood:	n/a	n/a
23	BHLHE40	chr7:149470191-149470441	K562	blood:	n/a	chr7:149470279-149470295
24	BHLHE40	chr7:149486849-149486853	K562	blood:	n/a	n/a
25	BHLHE40	chr7:149474321-149474331	K562	blood:	n/a	n/a
26	BHLHE40	chr7:149458504-149458871	K562	blood:	n/a	n/a
27	BHLHE40	chr7:149485581-149486169	HepG2	liver:	n/a	n/a
28	BHLHE40	chr7:149493429-149493435	K562	blood:	n/a	n/a
29	BHLHE40	chr7:149471336-149471864	K562	blood:	n/a	n/a
30	BHLHE40	chr7:149473086-149473105	K562	blood:	n/a	n/a
31	BHLHE40	chr7:149484475-149485102	K562	blood:	n/a	n/a
32	BHLHE40	chr7:149487231-149487628	K562	blood:	n/a	n/a
33	BHLHE40	chr7:149468628-149469161	GM12878	blood:	n/a	n/a
34	BHLHE40	chr7:149475405-149475739	K562	blood:	n/a	n/a
35	BHLHE40	chr7:149468449-149469169	K562	blood:	n/a	n/a
36	BRCA1	chr7:149468704-149468713	GM12878	blood:	n/a	n/a
37	BRCA1	chr7:149487336-149487411	H1-hESC	embryonic stem cell:	n/a	n/a
38	CBX3	chr7:149468749-149469600	K562	blood:	n/a	n/a
39	CBX3	chr7:149484431-149485045	K562	blood:	n/a	n/a
40	CBX3	chr7:149487111-149487573	K562	blood:	n/a	n/a
41	CCNT2	chr7:149470128-149471821	K562	blood:	n/a	chr7:149470896-149470905
42	CCNT2	chr7:149462762-149463076	K562	blood:	n/a	n/a
43	CCNT2	chr7:149468580-149469746	K562	blood:	n/a	chr7:149469469-149469478
44	CCNT2	chr7:149473416-149473865	K562	blood:	n/a	n/a
45	CCNT2	chr7:149491898-149491995	K562	blood:	n/a	n/a
46	CCNT2	chr7:149497332-149497377	K562	blood:	n/a	n/a
47	CCNT2	chr7:149484506-149485004	K562	blood:	n/a	chr7:149484696-149484705
48	CCNT2	chr7:149487187-149487786	K562	blood:	n/a	n/a
49	CCNT2	chr7:149458298-149458798	K562	blood:	n/a	chr7:149458689-149458698
50	CEBPB	chr7:149458412-149458682	K562	blood:	n/a	n/a

(count:2381 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:149472049-149472099	SAEC	small airway:	n/a
2	chr7:149470820-149470870	NHDF-neo	bronchial:	n/a
3	chr7:149472049-149472099	SAEC	small airway:	n/a
4	chr7:149470820-149470870	NHDF-neo	bronchial:	n/a
5	chr7:149461522-149461572	AG09319	gingival:	n/a
6	chr7:149472134-149472184	MCF10A-Er-Src	breast:	n/a
7	chr7:149484798-149484848	Hepatocyte	liver:	n/a
8	chr7:149470343-149470393	MCF-7	breast:	n/a
9	chr7:149484798-149484848	SK-N-SH	brain:	n/a
10	chr7:149464905-149464955	AG04449	skin:	fetal
11	chr7:149480305-149480355	NB4	blood:	n/a
12	chr7:149469722-149469772	HCM	heart:	n/a
13	chr7:149468994-149469044	HepG2	liver:	n/a
14	chr7:149484880-149484930	GM06990	blood:	n/a
15	chr7:149470284-149470334	A549	lung:	n/a
16	chr7:149484798-149484848	HRE	kidney:	n/a
17	chr7:149489783-149489833	AG09319	gingival:	n/a
18	chr7:149460972-149461022	K562	blood:	n/a
19	chr7:149470295-149470345	HNPCEpiC	eye:	n/a
20	chr7:149470343-149470393	AG09319	gingival:	n/a
21	chr7:149470295-149470345	IMR90	lung:	fetal
22	chr7:149472134-149472184	HEK293	kidney:	embryo
23	chr7:149465808-149465858	HAEpiC	amniotic membrane:	n/a
24	chr7:149470335-149470385	SK-N-MC	brain:	n/a
25	chr7:149473097-149473147	PANC-1	pancreas:	n/a
26	chr7:149485981-149486031	AG10803	skin:	n/a
27	chr7:149469722-149469772	AG04449	skin:	fetal
28	chr7:149470809-149470859	AG10803	skin:	n/a
29	chr7:149472134-149472184	HPAEpiC	pulmonary alveolar:	n/a
30	chr7:149460972-149461022	GM19239	blood:	n/a
31	chr7:149471884-149471934	BE2_C	brain:	n/a
32	chr7:149469722-149469772	PANC-1	pancreas:	n/a
33	chr7:149485981-149486031	GM19239	blood:	n/a
34	chr7:149468994-149469044	SAEC	small airway:	n/a
35	chr7:149484985-149485035	AG09309	skin:	n/a
36	chr7:149468365-149468415	PFSK-1	brain:	n/a
37	chr7:149484798-149484848	HCPEpiC	choroid plexus:	n/a
38	chr7:149465477-149465527	ProgFib	skin:	n/a
39	chr7:149470820-149470870	HMEC	breast:	n/a
40	chr7:149476924-149476974	Hela-S3	cervix:	n/a
41	chr7:149468365-149468415	SK-N-SH	brain:	n/a
42	chr7:149487677-149487727	HIPEpiC	eye:	n/a
43	chr7:149476924-149476974	GM12892	blood:	n/a
44	chr7:149473178-149473228	HNPCEpiC	eye:	n/a
45	chr7:149484985-149485035	Jurkat	blood:	n/a
46	chr7:149470284-149470334	SK-N-MC	brain:	n/a
47	chr7:149476924-149476974	SAEC	small airway:	n/a
48	chr7:149484880-149484930	HL-60	blood:	n/a
49	chr7:149468994-149469044	AG09319	gingival:	n/a
50	chr7:149484880-149484930	U87	brain:	n/a

(count:79 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:149486923..149488789-chr7:149516308..149518311,2	MCF-7	breast:
2	chr7:149448586..149450426-chr7:149459263..149461454,2	K562	blood:
3	chr7:149482558..149484845-chr7:149519799..149522299,2	K562	blood:
4	chr7:149476551..149479010-chr7:149504345..149507000,2	K562	blood:
5	chr7:149473801..149475401-chr7:149492673..149494757,2	MCF-7	breast:
6	chr7:149468811..149471165-chr7:149492241..149495834,3	K562	blood:
7	chr7:149489220..149491723-chr7:149504339..149506284,2	K562	blood:
8	chr7:149475035..149477131-chr7:149479756..149481551,3	K562	blood:
9	chr7:149321909..149324897-chr7:149481416..149483089,2	K562	blood:
10	chr7:149359887..149360749-chr7:149496598..149497119,2	MCF-7	breast:
11	chr7:149478904..149480912-chr7:149507505..149509845,2	K562	blood:
12	chr7:149487842..149489605-chr7:149493457..149495726,2	MCF-7	breast:
13	chr7:149468811..149471165-chr7:149492241..149495834,3	K562	blood:
14	chr7:149418945..149421003-chr7:149472021..149474839,2	K562	blood:
15	chr7:149470464..149473149-chr7:149495554..149497306,2	MCF-7	breast:
16	chr7:149450433..149451411-chr7:149468680..149469637,2	K562	blood:
17	chr7:149475777..149478196-chr7:149495163..149497885,2	K562	blood:
18	chr7:149459369..149463521-chr7:149463788..149469028,7	MCF-7	breast:
19	chr7:149467684..149471867-chr7:149482733..149487472,6	K562	blood:
20	chr7:149468983..149471079-chr7:149493148..149495214,3	MCF-7	breast:
21	chr7:149475035..149477131-chr7:149479756..149481551,3	K562	blood:
22	chr7:149437611..149439683-chr7:149477013..149479789,2	K562	blood:
23	chr7:149450620..149451175-chr7:149496361..149497222,2	MCF-7	breast:
24	chr7:149416557..149419178-chr7:149484233..149488617,3	K562	blood:
25	chr7:149468983..149471079-chr7:149493148..149495214,3	MCF-7	breast:
26	chr7:149495710..149497643-chr7:149503377..149505393,2	K562	blood:
27	chr7:149459369..149463521-chr7:149463788..149469028,7	MCF-7	breast:
28	chr7:149438735..149440917-chr7:149459618..149461528,2	K562	blood:
29	chr7:149491656..149493796-chr7:149550496..149553442,2	MCF-7	breast:
30	chr7:149475777..149478196-chr7:149495163..149497885,2	K562	blood:
31	chr7:149320616..149324173-chr7:149466840..149469728,4	K562	blood:
32	chr7:149366018..149366631-chr7:149496661..149497357,2	MCF-7	breast:
33	chr7:149478680..149481554-chr7:149493903..149496392,2	MCF-7	breast:
34	chr7:149320646..149323344-chr7:149466840..149468617,2	K562	blood:
35	chr7:149451449..149452956-chr7:149457788..149459406,2	K562	blood:
36	chr7:149484023..149486893-chr7:149499166..149501510,2	K562	blood:
37	chr7:149467684..149471867-chr7:149482733..149487472,6	K562	blood:
38	chr7:149484023..149486893-chr7:149499166..149501510,2	K562	blood:
39	chr7:149469487..149472454-chr7:149520687..149524368,4	MCF-7	breast:
40	chr7:149479515..149482094-chr7:149544911..149547463,2	MCF-7	breast:
41	chr7:149158020..149159528-chr7:149468647..149470369,2	K562	blood:
42	chr7:149473801..149475401-chr7:149492673..149494757,2	MCF-7	breast:
43	chr7:149499623..149502288-chr7:149502769..149505265,4	K562	blood:
44	chr7:149441362..149443055-chr7:149460241..149462423,2	MCF-7	breast:
45	chr7:149425054..149427794-chr7:149470002..149471582,2	MCF-7	breast:
46	chr7:149473373..149475721-chr7:149519077..149521805,2	MCF-7	breast:
47	chr7:149484679..149488642-chr7:149489546..149492770,6	MCF-7	breast:
48	chr7:149377419..149380079-chr7:149485808..149488196,2	K562	blood:
49	chr7:149318463..149321667-chr7:149470267..149475750,6	K562	blood:
50	chr7:149332468..149334868-chr7:149493693..149495718,2	K562	blood:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF862-1	chr7:149493695-149493834	NONHSAT124049
2	lnc-ZNF862-1	chr7:149475870-149476028	ENSG00000197558.7
3	lnc-ZNF862-1	chr7:149496922-149497125	NONHSAT124049
4	lnc-ZNF862-1	chr7:149473524-149473617	ENSG00000197558.7
5	lnc-ZNF862-1	chr7:149480195-149480379	ENSG00000197558.7
6	lnc-ZNF862-1	chr7:149479270-149479387	ENSG00000197558.7
7	lnc-ZNF862-1	chr7:149494360-149494432	NONHSAT124049
8	lnc-KRBA1-2	chr7:149470297-149473130	NONHSAT124042

No data

Variant related genes	Relation type
SSPO	TF binding region
ZNF467	TF binding region
SSPO	CpG island
ZNF467	CpG island
ENSG00000196453	chromatin interactions
ENSG00000197558	chromatin interactions
ENSG00000133624	chromatin interactions
ENSG00000204934	chromatin interactions
ENSG00000164896	chromatin interactions
ENSG00000181444	chromatin interactions
ENSG00000171130	chromatin interactions
ENSG00000107485	chromatin interactions
ENSG00000133619	chromatin interactions
ENSG00000106479	chromatin interactions

Extended variants
information (count: 2315 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:2315 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs855664	chr7:149458623-149458624	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs115061698	chr7:149458633-149458634	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs546851134	chr7:149458644-149458645	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs563262569	chr7:149458649-149458650	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs190212912	chr7:149458652-149458653	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs549002862	chr7:149458750-149458751	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs545191339	chr7:149458810-149458811	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs183596714	chr7:149458818-149458819	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs28482226	chr7:149458832-149458833	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs114315114	chr7:149458916-149458917	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs571445710	chr7:149458972-149458973	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs536940726	chr7:149459063-149459064	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs139086801	chr7:149459065-149459066	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs41493844	chr7:149459079-149459080	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs567228527	chr7:149459115-149459116	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs535418524	chr7:149459128-149459129	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs550956787	chr7:149459211-149459212	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs375297001	chr7:149459232-149459233	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs555751136	chr7:149459238-149459239	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs114982343	chr7:149459240-149459241	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs55771739	chr7:149459254-149459255	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs558054916	chr7:149459322-149459323	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs372036754	chr7:149459325-149459326	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs578234635	chr7:149459346-149459347	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs35185268	chr7:149459391-149459392	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs143945273	chr7:149459544-149459545	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs144015421	chr7:149459562-149459563	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs369923059	chr7:149459563-149459564	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs550236344	chr7:149459565-149459566	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs188431881	chr7:149459595-149459596	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs192166694	chr7:149459596-149459597	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs559321227	chr7:149459624-149459625	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs568426089	chr7:149459632-149459633	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs558066062	chr7:149459702-149459703	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs551487028	chr7:149459826-149459827	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs551705758	chr7:149459830-149459831	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs535607787	chr7:149459853-149459854	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs571352597	chr7:149459858-149459859	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs530572424	chr7:149459859-149459860	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs550370628	chr7:149459874-149459875	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs557170971	chr7:149459894-149459895	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs536166522	chr7:149459968-149459969	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs549088086	chr7:149460053-149460054	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs139521463	chr7:149460054-149460055	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs534799998	chr7:149460059-149460060	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs149816176	chr7:149460074-149460075	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs11771309	chr7:149460076-149460077	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs374821170	chr7:149460080-149460081	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs537599016	chr7:149460086-149460087	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs183878844	chr7:149460088-149460089	Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Myelodysplastic syndrome	17634407	CNVD
Multiple myeloma	16461302	CNVD
Neuroblastoma	18923191	CNVD
Schizophrenia	17646849	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	16864856	CNVD
Autism	20808228	CNVD
Breast cancer	21509527	CNVD
Ovarian cancer	21720365	CNVD
Heart disease	21282601	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Lobular carcinoma	20920651	CNVD
Long-qt syndrome	20920651	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Liver carcinoma	19366792	CNVD
Long-qt syndrome	17576883	CNVD
Bradycardia syndrome	17576883	CNVD
Sudden cardiac death	19188705	CNVD
renal disease	17924346	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1408 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:149448600-149461000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr7:149448600-149461000	Weak transcription	Lung	lung
3	chr7:149448800-149461000	Weak transcription	Spleen	Spleen
4	chr7:149451000-149462400	Weak transcription	Pancreas	Pancrea
5	chr7:149451000-149462600	Weak transcription	Liver	Liver
6	chr7:149451200-149460400	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr7:149451200-149468400	Weak transcription	Right Atrium	heart
8	chr7:149451400-149461000	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr7:149451400-149461400	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr7:149452600-149463200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr7:149453000-149461600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr7:149454600-149460800	Weak transcription	Primary T cells from cord blood	blood
13	chr7:149457800-149458800	Flanking Active TSS	K562	blood
14	chr7:149458600-149459200	Enhancers	Gastric	stomach
15	chr7:149458600-149461600	Weak transcription	Right Ventricle	heart
16	chr7:149458800-149459600	Weak transcription	Fetal Kidney	kidney
17	chr7:149458800-149459800	Enhancers	Stomach Mucosa	stomach
18	chr7:149458800-149460000	Enhancers	K562	blood
19	chr7:149459200-149461000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr7:149459200-149461800	Weak transcription	Gastric	stomach
21	chr7:149459200-149462400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr7:149459400-149462600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
23	chr7:149459600-149460000	Enhancers	Fetal Kidney	kidney
24	chr7:149459800-149460200	Bivalent Enhancer	Fetal Stomach	stomach
25	chr7:149460000-149465000	Weak transcription	K562	blood
26	chr7:149460200-149460800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr7:149460400-149462000	Strong transcription	Primary neutrophils fromperipheralblood	blood
28	chr7:149460400-149463200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
29	chr7:149460400-149465400	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr7:149460600-149463200	Weak transcription	Adipose Nuclei	Adipose
31	chr7:149460600-149468200	Weak transcription	Pancreatic Islets	Pancreatic Islet
32	chr7:149460800-149461200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr7:149460800-149467600	Weak transcription	Primary hematopoietic stem cells	blood
34	chr7:149460800-149467800	Strong transcription	Primary T cells from cord blood	blood
35	chr7:149461000-149461200	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr7:149461000-149462400	Strong transcription	Spleen	Spleen
37	chr7:149461000-149462600	Strong transcription	Monocytes-CD14+_RO01746	blood
38	chr7:149461000-149463200	Enhancers	Esophagus	oesophagus
39	chr7:149461000-149464400	ZNF genes & repeats	Fetal Stomach	stomach
40	chr7:149461000-149467000	Strong transcription	Lung	lung
41	chr7:149461000-149467200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr7:149461000-149467800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
43	chr7:149461200-149461600	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr7:149461400-149461600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
45	chr7:149461400-149461600	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr7:149461400-149461600	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
47	chr7:149461400-149461800	Bivalent Enhancer	Fetal Heart	heart
48	chr7:149461400-149462800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
49	chr7:149461400-149463200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
50	chr7:149461400-149463200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links