Variant report

Variant	nsv889434
Chromosome Location	chr7:149563134-149647469
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1309)
CpG islands
(count:2201)
Chromatin interactive
region (count:31)
LncRNA
region (count:25)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1309 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:149582723-149583399	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:149569917-149570279	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:149570724-149570796	K562	blood:	n/a	n/a
4	ATF2	chr7:149580488-149580895	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr7:149582481-149582971	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr7:149570786-149571273	A549	lung:	n/a	n/a
7	ATF3	chr7:149570787-149571275	A549	lung:	n/a	n/a
8	ATF3	chr7:149569772-149570122	K562	blood:	n/a	n/a
9	ATF3	chr7:149570878-149571254	K562	blood:	n/a	n/a
10	BACH1	chr7:149570614-149570991	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr7:149580465-149580839	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr7:149570143-149571239	K562	blood:	n/a	n/a
13	BATF	chr7:149618320-149618563	GM12878	blood:	n/a	n/a
14	BATF	chr7:149568705-149569074	GM12878	blood:	n/a	n/a
15	BATF	chr7:149568758-149569093	GM12878	blood:	n/a	n/a
16	BCL3	chr7:149630950-149631218	GM12878	blood:	n/a	n/a
17	BCL3	chr7:149631103-149631404	GM12878	blood:	n/a	n/a
18	BHLHE40	chr7:149570710-149572354	HepG2	liver:	n/a	n/a
19	BHLHE40	chr7:149567871-149567960	K562	blood:	n/a	n/a
20	BHLHE40	chr7:149570284-149570668	GM12878	blood:	n/a	n/a
21	BHLHE40	chr7:149580418-149581011	K562	blood:	n/a	n/a
22	BHLHE40	chr7:149569494-149571562	K562	blood:	n/a	n/a
23	BHLHE40	chr7:149569534-149570143	HepG2	liver:	n/a	n/a
24	BHLHE40	chr7:149570982-149571281	GM12878	blood:	n/a	n/a
25	BRCA1	chr7:149569691-149570033	HepG2	liver:	n/a	n/a
26	BRCA1	chr7:149570995-149571386	GM12878	blood:	n/a	n/a
27	BRCA1	chr7:149571926-149572401	HepG2	liver:	n/a	n/a
28	BRCA1	chr7:149571389-149571516	HepG2	liver:	n/a	n/a
29	BRCA1	chr7:149581295-149581426	HepG2	liver:	n/a	n/a
30	CBX3	chr7:149569381-149570140	K562	blood:	n/a	n/a
31	CBX3	chr7:149569402-149571354	K562	blood:	n/a	n/a
32	CCNT2	chr7:149565719-149565772	K562	blood:	n/a	n/a
33	CCNT2	chr7:149570061-149571478	K562	blood:	n/a	n/a
34	CEBPB	chr7:149571848-149572136	HepG2	liver:	n/a	n/a
35	CEBPB	chr7:149600659-149600827	HepG2	liver:	n/a	chr7:149600686-149600697
36	CEBPB	chr7:149600641-149600848	A549	lung:	n/a	chr7:149600686-149600697
37	CEBPB	chr7:149564427-149564666	HepG2	liver:	n/a	n/a
38	CEBPB	chr7:149600657-149600793	K562	blood:	n/a	chr7:149600686-149600697
39	CEBPB	chr7:149569459-149570357	K562	blood:	n/a	n/a
40	CEBPB	chr7:149615022-149615161	K562	blood:	n/a	chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615084-149615093 chr7:149615084-149615093 chr7:149615083-149615094 chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615082-149615093
41	CEBPB	chr7:149615022-149615152	A549	lung:	n/a	chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615084-149615093 chr7:149615084-149615093 chr7:149615083-149615094 chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615082-149615093
42	CEBPB	chr7:149569513-149570337	K562	blood:	n/a	n/a
43	CEBPB	chr7:149571052-149571226	K562	blood:	n/a	n/a
44	CEBPB	chr7:149572398-149572529	K562	blood:	n/a	chr7:149572404-149572417
45	CEBPB	chr7:149581488-149581752	HepG2	liver:	n/a	chr7:149581616-149581627
46	CEBPB	chr7:149569857-149570560	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr7:149615029-149615227	HepG2	liver:	n/a	chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615084-149615093 chr7:149615084-149615093 chr7:149615083-149615094 chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615082-149615093
48	CEBPB	chr7:149569947-149570077	HepG2	liver:	n/a	n/a
49	CEBPD	chr7:149571000-149571298	HepG2	liver:	n/a	n/a
50	CHD1	chr7:149569747-149570438	GM12878	blood:	n/a	n/a

(count:2201 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:149571146-149571196	HRPEpiC	eye:	n/a
2	chr7:149570128-149570178	HIPEpiC	eye:	n/a
3	chr7:149570989-149571039	AG10803	skin:	n/a
4	chr7:149570987-149571037	Hela-S3	cervix:	n/a
5	chr7:149570128-149570178	PFSK-1	brain:	n/a
6	chr7:149571146-149571196	HRPEpiC	eye:	n/a
7	chr7:149570128-149570178	HIPEpiC	eye:	n/a
8	chr7:149570989-149571039	AG10803	skin:	n/a
9	chr7:149570987-149571037	Hela-S3	cervix:	n/a
10	chr7:149570128-149570178	PFSK-1	brain:	n/a
11	chr7:149571373-149571423	HCPEpiC	choroid plexus:	n/a
12	chr7:149571107-149571157	IMR90	lung:	fetal
13	chr7:149582572-149582622	GM12878	blood:	n/a
14	chr7:149578384-149578434	BE2_C	brain:	n/a
15	chr7:149569998-149570048	GM06990	blood:	n/a
16	chr7:149569883-149569933	AoSMC	blood vessel:	n/a
17	chr7:149569715-149569765	T-47D	breast:	n/a
18	chr7:149570989-149571039	HEEpiC	esophagus:	n/a
19	chr7:149578441-149578491	AG09309	skin:	n/a
20	chr7:149571111-149571161	U87	brain:	n/a
21	chr7:149569987-149570037	BE2_C	brain:	n/a
22	chr7:149577256-149577306	BJ	skin:	n/a
23	chr7:149571180-149571230	HCF	heart:	n/a
24	chr7:149571111-149571161	ECC-1	luminal epithelium:	n/a
25	chr7:149570987-149571037	GM12891	blood:	n/a
26	chr7:149580879-149580929	AG09309	skin:	n/a
27	chr7:149569715-149569765	IMR90	lung:	fetal
28	chr7:149570367-149570417	HepG2	liver:	n/a
29	chr7:149569998-149570048	ProgFib	skin:	n/a
30	chr7:149569987-149570037	T-47D	breast:	n/a
31	chr7:149570036-149570086	SAEC	small airway:	n/a
32	chr7:149571256-149571306	AG04450	lung:	fetal
33	chr7:149571017-149571067	HRCEpiC	kidney:	n/a
34	chr7:149571146-149571196	BE2_C	brain:	n/a
35	chr7:149571111-149571161	HL-60	blood:	n/a
36	chr7:149570992-149571042	RPTEC	kidney:	n/a
37	chr7:149570992-149571042	Hepatocyte	liver:	n/a
38	chr7:149570036-149570086	HEEpiC	esophagus:	n/a
39	chr7:149569883-149569933	Hepatocyte	liver:	n/a
40	chr7:149582572-149582622	BE2_C	brain:	n/a
41	chr7:149569987-149570037	AG09319	gingival:	n/a
42	chr7:149570183-149570233	HCT-116	colon:	n/a
43	chr7:149570992-149571042	ProgFib	skin:	n/a
44	chr7:149570071-149570121	NHDF-neo	bronchial:	n/a
45	chr7:149578384-149578434	NHBE	bronchial:	n/a
46	chr7:149570040-149570090	AG04450	lung:	fetal
47	chr7:149569946-149569996	ProgFib	skin:	n/a
48	chr7:149569715-149569765	NT2-D1	testis:	n/a
49	chr7:149571111-149571161	RPTEC	kidney:	n/a
50	chr7:149570128-149570178	BJ	skin:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:149561762..149564667-chr7:149569183..149572180,2	MCF-7	breast:
2	chr7:149535200..149537036-chr7:149565230..149566898,2	MCF-7	breast:
3	chr7:149320936..149323357-chr7:149569430..149571790,2	K562	blood:
4	chr7:149484191..149484692-chr7:149580431..149580931,2	K562	blood:
5	chr7:149470006..149471576-chr7:149569800..149572611,2	MCF-7	breast:
6	chr7:149580491..149582159-chr7:149582592..149584410,2	MCF-7	breast:
7	chr7:149541998..149544901-chr7:149565491..149567643,2	MCF-7	breast:
8	chr7:149559447..149562113-chr7:149563589..149565249,2	MCF-7	breast:
9	chr7:149580322..149580844-chr7:149745955..149746566,2	MCF-7	breast:
10	chr7:149569895..149574234-chr7:149575186..149579607,5	K562	blood:
11	chr7:149534427..149538606-chr7:149567610..149571411,8	MCF-7	breast:
12	chr7:149573433..149575641-chr7:149575781..149577952,2	K562	blood:
13	chr7:149534869..149537140-chr7:149569608..149571872,2	MCF-7	breast:
14	chr7:149570115..149571658-chr7:149574660..149576811,2	MCF-7	breast:
15	chr7:149543572..149545726-chr7:149561938..149563805,2	K562	blood:
16	chr7:149570793..149573386-chr7:149577095..149580560,3	K562	blood:
17	chr7:149561961..149563986-chr7:149564206..149566986,2	MCF-7	breast:
18	chr7:149501055..149503338-chr7:149561332..149564151,2	MCF-7	breast:
19	chr7:149570793..149573386-chr7:149577095..149580560,3	K562	blood:
20	chr7:149639335..149639849-chr7:153850966..153851836,2	MCF-7	breast:
21	chr7:149561961..149563986-chr7:149564206..149566986,2	MCF-7	breast:
22	chr7:149549543..149551998-chr7:149562107..149563696,2	MCF-7	breast:
23	chr7:149570954..149573807-chr7:150065336..150068583,3	MCF-7	breast:
24	chr7:149569895..149574234-chr7:149575186..149579607,5	K562	blood:
25	chr7:149561896..149564706-chr7:149568478..149571316,3	MCF-7	breast:
26	chr7:149580491..149582159-chr7:149582592..149584410,2	MCF-7	breast:
27	chr17:7742656..7744593-chr7:149569893..149571765,2	MCF-7	breast:
28	chr7:149565876..149568768-chr7:149569299..149572526,4	MCF-7	breast:
29	chr7:149558310..149561559-chr7:149563222..149566237,4	K562	blood:
30	chr7:149552958..149556692-chr7:149569431..149572325,5	MCF-7	breast:
31	chr7:149570103..149572096-chr7:150064199..150066897,3	MCF-7	breast:

(count:25 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
2	lnc-ZNF467-1	chr7:149564783-149566947	NONHSAT124073
3	lnc-ZNF862-2	chr7:149571893-149572024	NONHSAT124078
4	lnc-ZNF862-2	chr7:149576424-149576631	NONHSAT124078
5	lnc-ZNF467-1	chr7:149578448-149578669	ENSG00000273293.1
6	lnc-ZNF467-1	chr7:149577458-149577699	ENSG00000204934
7	lnc-ZNF467-1	chr7:149568731-149568885	NONHSAT124073
8	lnc-ZNF467-1	chr7:149570313-149570934	ENSG00000204934
9	lnc-ZNF862-2	chr7:149575767-149575879	NONHSAT124078
10	lnc-ZNF862-2	chr7:149576425-149576454	NONHSAT124076
11	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
12	lnc-ZNF467-1	chr7:149564861-149566947	ENSG00000204934
13	lnc-ZNF467-1	chr7:149570313-149570951	NONHSAT124073
14	lnc-ATP6V0E2-4	chr7:149587828-149588505	ENSG00000273011.1
15	lnc-ZNF862-2	chr7:149571077-149571258	NONHSAT124076
16	lnc-ZNF467-1	chr7:149567387-149567440	ENSG00000204934
17	lnc-ZNF862-2	chr7:149572688-149572734	NONHSAT124076
18	lnc-ZNF862-2	chr7:149572687-149572734	NONHSAT124078
19	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
20	lnc-ZNF467-1	chr7:149567331-149567440	NONHSAT124073
21	lnc-ZNF467-1	chr7:149570313-149570931	ENSG00000204934
22	lnc-ZNF467-1	chr7:149567331-149567440	ENSG00000204934
23	lnc-ATP6V0E2-3	chr7:149578553-149579199	NONHSAT124082
24	lnc-ZNF467-1	chr7:149564786-149566947	ENSG00000204934
25	lnc-ZNF467-3	chr7:149607852-149608064	expReg_chr7_11327_-

No data

Variant related genes	Relation type
ENSG00000273293	TF binding region
ENSG00000224016	TF binding region
ATP6V0E2-AS1	TF binding region
ENSG00000273011	TF binding region
ATP6V0E2	TF binding region
ENSG00000273419	TF binding region
ENSG00000273293	CpG island
ENSG00000224016	CpG island
ATP6V0E2-AS1	CpG island
ENSG00000273011	CpG island
ATP6V0E2	CpG island
ENSG00000273419	CpG island
ENSG00000133624	chromatin interactions
ENSG00000106479	chromatin interactions
ENSG00000273293	chromatin interactions
ENSG00000171130	chromatin interactions
ENSG00000204934	chromatin interactions
ENSG00000196456	chromatin interactions
ENSG00000273419	chromatin interactions
ENSG00000132510	chromatin interactions
ENSG00000181444	chromatin interactions
ENSG00000214022	chromatin interactions
MYO9A	miRNA target sites
UBE2W	miRNA target sites
RNF219	miRNA target sites
SLC26A4	miRNA target sites
TAF5	miRNA target sites
HAUS8	miRNA target sites
SMARCC1	miRNA target sites
HMGA2	miRNA target sites
PRR5L	miRNA target sites
CCDC47	miRNA target sites

Extended variants
information (count: 1418 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:1418 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs371069153	chr7:149563134-149563135	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs369532547	chr7:149563179-149563180	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs541594167	chr7:149563193-149563194	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs73168078	chr7:149563211-149563212	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	mRNA abundance
5	rs533711943	chr7:149563237-149563238	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs566246417	chr7:149563241-149563242	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs550472103	chr7:149563261-149563262	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs183566876	chr7:149563262-149563263	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs374130674	chr7:149563355-149563356	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs548824473	chr7:149563394-149563395	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs143686880	chr7:149563406-149563407	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs534517644	chr7:149563506-149563507	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs551201428	chr7:149563507-149563508	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs373497483	chr7:149563516-149563517	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs536978185	chr7:149563517-149563518	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs138405106	chr7:149563523-149563524	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs10224299	chr7:149563550-149563551	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs188396284	chr7:149563582-149563583	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs193215715	chr7:149563593-149563594	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs572534911	chr7:149563615-149563616	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs541530653	chr7:149563646-149563647	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs571933123	chr7:149563663-149563664	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs142790235	chr7:149563695-149563696	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs3735330	chr7:149563738-149563739	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs543773786	chr7:149563752-149563753	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs78093067	chr7:149563783-149563784	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs112017826	chr7:149563788-149563789	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs542568110	chr7:149563814-149563815	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs557199283	chr7:149563826-149563827	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs536800319	chr7:149563860-149563861	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs3823698	chr7:149563894-149563895	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
32	rs528217132	chr7:149563912-149563913	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs551039271	chr7:149563942-149563943	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs571143317	chr7:149564004-149564005	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs549785488	chr7:149564017-149564018	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs11544265	chr7:149564037-149564038	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs533693512	chr7:149564083-149564084	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs535231559	chr7:149564124-149564125	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs558064956	chr7:149564127-149564128	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs184687416	chr7:149564152-149564153	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs567506774	chr7:149564160-149564161	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs535493623	chr7:149564176-149564177	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs555775615	chr7:149564184-149564185	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs146977803	chr7:149564201-149564202	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs535156228	chr7:149564255-149564256	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs558247876	chr7:149564261-149564262	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs116158819	chr7:149564264-149564265	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs187859841	chr7:149564265-149564266	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs557378935	chr7:149564270-149564271	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs191207846	chr7:149564272-149564273	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Myelodysplastic syndrome	17634407	CNVD
Multiple myeloma	16461302	CNVD
Neuroblastoma	18923191	CNVD
Schizophrenia	17646849	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	16864856	CNVD
Autism	20808228	CNVD
Breast cancer	21509527	CNVD
Ovarian cancer	21720365	CNVD
Heart disease	21282601	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Lobular carcinoma	20920651	CNVD
Long-qt syndrome	20920651	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Liver carcinoma	19366792	CNVD
Long-qt syndrome	17576883	CNVD
Bradycardia syndrome	17576883	CNVD
Sudden cardiac death	19188705	CNVD
renal disease	17924346	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1344 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:149540000-149569600	Weak transcription	Psoas Muscle	Psoas
2	chr7:149543000-149569600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr7:149552200-149569400	Weak transcription	Fetal Kidney	kidney
4	chr7:149552800-149564800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
5	chr7:149552800-149569600	Weak transcription	NHDF-Ad	bronchial
6	chr7:149552800-149569800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr7:149553000-149567400	Weak transcription	NHLF	lung
8	chr7:149553000-149567800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr7:149553000-149568800	Weak transcription	HSMMtube	muscle
10	chr7:149553200-149564200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr7:149553200-149569600	Weak transcription	HSMM	muscle
12	chr7:149553200-149569800	Weak transcription	Right Atrium	heart
13	chr7:149553400-149569800	Weak transcription	Small Intestine	intestine
14	chr7:149553600-149564000	Strong transcription	Aorta	Aorta
15	chr7:149554000-149563400	Weak transcription	Fetal Heart	heart
16	chr7:149554800-149563200	Strong transcription	Placenta	Placenta
17	chr7:149554800-149565400	Strong transcription	Brain Anterior Caudate	brain
18	chr7:149555000-149563200	Strong transcription	Fetal Stomach	stomach
19	chr7:149555000-149565200	Strong transcription	Fetal Muscle Leg	muscle
20	chr7:149555600-149564000	Strong transcription	Brain Cingulate Gyrus	brain
21	chr7:149555600-149564000	Strong transcription	Skeletal Muscle Female	skeletal muscle
22	chr7:149555600-149565000	Strong transcription	Stomach Smooth Muscle	stomach
23	chr7:149555800-149566600	Strong transcription	Fetal Intestine Small	intestine
24	chr7:149556000-149568800	Strong transcription	Brain Inferior Temporal Lobe	brain
25	chr7:149556200-149563400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr7:149556200-149563600	Strong transcription	Esophagus	oesophagus
27	chr7:149556200-149565200	Strong transcription	Brain Hippocampus Middle	brain
28	chr7:149556200-149565600	Strong transcription	Skeletal Muscle Male	skeletal muscle
29	chr7:149556400-149563600	Strong transcription	Gastric	stomach
30	chr7:149556400-149563800	Strong transcription	Brain Germinal Matrix	brain
31	chr7:149556400-149564000	Strong transcription	Fetal Intestine Large	intestine
32	chr7:149556400-149564200	Strong transcription	Adipose Nuclei	Adipose
33	chr7:149556400-149564400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr7:149556400-149564400	Strong transcription	Brain Angular Gyrus	brain
35	chr7:149556600-149563600	Strong transcription	Brain Substantia Nigra	brain
36	chr7:149556600-149563600	Strong transcription	Duodenum Smooth Muscle	Duodenum
37	chr7:149556600-149564200	Strong transcription	Pancreas	Pancrea
38	chr7:149556600-149565600	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr7:149556800-149563800	Strong transcription	Colon Smooth Muscle	Colon
40	chr7:149557000-149563800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr7:149557400-149563800	Strong transcription	Placenta Amnion	Placenta Amnion
42	chr7:149557800-149563200	Weak transcription	Fetal Brain Male	brain
43	chr7:149558400-149565600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
44	chr7:149558400-149569600	Weak transcription	Osteobl	bone
45	chr7:149559000-149563600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr7:149559600-149568800	Enhancers	Primary hematopoietic stem cells short term culture	blood
47	chr7:149559600-149569800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr7:149559800-149563600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr7:149559800-149569600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr7:149560000-149563800	Genic enhancers	Thymus	Thymus

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