Variant report

Variant	nsv889444
Chromosome Location	chr7:149720852-149838371
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:149822922-149823231	HepG2	liver:	n/a	n/a
2	ATF1	chr7:149742080-149742094	K562	blood:	n/a	n/a
3	BACH1	chr7:149746378-149746646	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr7:149743485-149743750	GM12878	blood:	n/a	n/a
5	BATF	chr7:149757655-149757938	GM12878	blood:	n/a	chr7:149757827-149757838
6	BCL3	chr7:149836967-149837225	GM12878	blood:	n/a	n/a
7	BCL3	chr7:149808531-149808727	GM12878	blood:	n/a	n/a
8	BCL3	chr7:149808506-149808789	GM12878	blood:	n/a	n/a
9	BHLHE40	chr7:149823075-149823280	HepG2	liver:	n/a	n/a
10	CEBPB	chr7:149786165-149786549	H1-hESC	embryonic stem cell:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
11	CEBPB	chr7:149786230-149786562	Hela-S3	cervix:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
12	CEBPB	chr7:149822923-149823294	HepG2	liver:	n/a	n/a
13	CEBPB	chr7:149822919-149823295	HepG2	liver:	n/a	n/a
14	CEBPB	chr7:149791162-149791277	HepG2	liver:	n/a	chr7:149791213-149791222 chr7:149791213-149791224
15	CEBPB	chr7:149786250-149786562	A549	lung:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
16	CEBPB	chr7:149798171-149798831	Hela-S3	cervix:	n/a	chr7:149798497-149798510 chr7:149798497-149798508
17	CEBPB	chr7:149822945-149823293	HepG2	liver:	n/a	n/a
18	CEBPB	chr7:149784693-149784950	HepG2	liver:	n/a	chr7:149784796-149784807
19	CEBPB	chr7:149786189-149786644	K562	blood:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
20	CEBPB	chr7:149822980-149823212	HepG2	liver:	n/a	n/a
21	CEBPB	chr7:149791079-149791364	H1-hESC	embryonic stem cell:	n/a	chr7:149791213-149791222 chr7:149791213-149791224
22	CEBPB	chr7:149786176-149786566	IMR90	lung:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
23	CEBPB	chr7:149786163-149786592	HepG2	liver:	n/a	chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786322-149786331 chr7:149786321-149786332 chr7:149786322-149786331
24	CEBPB	chr7:149804465-149804596	A549	lung:	n/a	n/a
25	CHD1	chr7:149746398-149746684	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD2	chr7:149746382-149746488	H1-hESC	embryonic stem cell:	n/a	n/a
27	CHD2	chr7:149798413-149798689	Hela-S3	cervix:	n/a	n/a
28	CTCF	chr7:149757647-149757904	GM19240	blood:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
29	CTCF	chr7:149744020-149744170	A549	lung:	n/a	n/a
30	CTCF	chr7:149743085-149743097	LNCaP	prostate:	n/a	n/a
31	CTCF	chr7:149757643-149757913	GM13977	blood:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
32	CTCF	chr7:149742813-149743019	Pancreas_OC	pancreas:	n/a	n/a
33	CTCF	chr7:149742820-149742970	MCF-7	breast:	n/a	n/a
34	CTCF	chr7:149722306-149722449	Fibrobl	skin:	n/a	chr7:149722360-149722381 chr7:149722365-149722383
35	CTCF	chr7:149757700-149757850	HAc	cerebellar:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
36	CTCF	chr7:149744020-149744170	HRPEpiC	eye:	n/a	n/a
37	CTCF	chr7:149757620-149757770	HMEC	breast:	n/a	n/a
38	CTCF	chr7:149722171-149722449	K562	blood:	n/a	chr7:149722360-149722381 chr7:149722365-149722383
39	CTCF	chr7:149757669-149757910	Kidney_OC	kidney:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
40	CTCF	chr7:149746300-149746450	GM12873	blood:	n/a	n/a
41	CTCF	chr7:149722265-149722449	Hela-S3	cervix:	n/a	chr7:149722360-149722381 chr7:149722365-149722383
42	CTCF	chr7:149746122-149746299	GM12878	blood:	n/a	chr7:149746208-149746221 chr7:149746248-149746261
43	CTCF	chr7:149831698-149831792	K562	blood:	n/a	chr7:149831742-149831751
44	CTCF	chr7:149742820-149742970	HAc	cerebellar:	n/a	n/a
45	CTCF	chr7:149746077-149746362	NHEK	skin:	n/a	chr7:149746208-149746221 chr7:149746248-149746261
46	CTCF	chr7:149742780-149742930	HCFaa	heart:	n/a	n/a
47	CTCF	chr7:149722279-149722485	A549	lung:	n/a	chr7:149722360-149722381 chr7:149722365-149722383
48	CTCF	chr7:149757660-149757810	GM12864	blood:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
49	CTCF	chr7:149757660-149757810	GM12873	blood:	n/a	chr7:149757768-149757784 chr7:149757767-149757785 chr7:149757770-149757783 chr7:149757769-149757790
50	CTCF	chr7:149742881-149742934	Lung_OC	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:149738501-149738551	AG10803	skin:	n/a
2	chr7:149731767-149731817	AG09319	gingival:	n/a
3	chr7:149738501-149738551	AG10803	skin:	n/a
4	chr7:149731767-149731817	AG09319	gingival:	n/a
5	chr7:149731742-149731792	GM12891	blood:	n/a
6	chr7:149732847-149732897	BE2_C	brain:	n/a
7	chr7:149744597-149744647	HRCEpiC	kidney:	n/a
8	chr7:149731767-149731817	T-47D	breast:	n/a
9	chr7:149767502-149767552	SK-N-SH	brain:	n/a
10	chr7:149744935-149744985	A549	lung:	n/a
11	chr7:149736127-149736177	HUVEC	blood vessel:	n/a
12	chr7:149809179-149809229	RPTEC	kidney:	n/a
13	chr7:149736127-149736177	HMEC	breast:	n/a
14	chr7:149742121-149742171	AG10803	skin:	n/a
15	chr7:149732847-149732897	HAEpiC	amniotic membrane:	n/a
16	chr7:149738473-149738523	Jurkat	blood:	n/a
17	chr7:149745299-149745349	HCT-116	colon:	n/a
18	chr7:149733103-149733153	GM12892	blood:	n/a
19	chr7:149746640-149746690	Hepatocyte	liver:	n/a
20	chr7:149742121-149742171	NB4	blood:	n/a
21	chr7:149742121-149742171	RPTEC	kidney:	n/a
22	chr7:149749941-149749991	HEK293	kidney:	embryo
23	chr7:149745299-149745349	T-47D	breast:	n/a
24	chr7:149780548-149780598	SK-N-SH	brain:	n/a
25	chr7:149746640-149746690	LNCaP	prostate:	n/a
26	chr7:149746640-149746690	HRPEpiC	eye:	n/a
27	chr7:149732847-149732897	SK-N-SH	brain:	n/a
28	chr7:149733821-149733871	HepG2	liver:	n/a
29	chr7:149742121-149742171	HCM	heart:	n/a
30	chr7:149767828-149767878	GM06990	blood:	n/a
31	chr7:149809179-149809229	HAEpiC	amniotic membrane:	n/a
32	chr7:149733821-149733871	A549	lung:	n/a
33	chr7:149745299-149745349	RPTEC	kidney:	n/a
34	chr7:149809179-149809229	HNPCEpiC	eye:	n/a
35	chr7:149767502-149767552	SK-N-SH_RA	brain:	n/a
36	chr7:149735726-149735776	GM12892	blood:	n/a
37	chr7:149809179-149809229	HEEpiC	esophagus:	n/a
38	chr7:149742121-149742171	HL-60	blood:	n/a
39	chr7:149809179-149809229	A549	lung:	n/a
40	chr7:149744041-149744091	Hepatocyte	liver:	n/a
41	chr7:149767828-149767878	HMEC	breast:	n/a
42	chr7:149749941-149749991	SAEC	small airway:	n/a
43	chr7:149767828-149767878	SKMC	muscle:	n/a
44	chr7:149735726-149735776	SK-N-SH_RA	brain:	n/a
45	chr7:149746077-149746127	HEEpiC	esophagus:	n/a
46	chr7:149744041-149744091	MCF10A-Er-Src	breast:	n/a
47	chr7:149744418-149744468	NHDF-neo	bronchial:	n/a
48	chr7:149746640-149746690	GM06990	blood:	n/a
49	chr7:149746468-149746518	HUVEC	blood vessel:	n/a
50	chr7:149738473-149738523	AG09309	skin:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:149580322..149580844-chr7:149745955..149746566,2	MCF-7	breast:
2	chr7:149757556..149758057-chr7:149919306..149919858,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATP6V0E2-2	chr7:149773639-149773744	ENSG00000241449
2	lnc-ATP6V0E2-2	chr7:149759178-149759348	ENSG00000241449
3	lnc-ATP6V0E2-2	chr7:149770706-149770828	ENSG00000241449
4	lnc-ATP6V0E2-2	chr7:149738452-149738550	ENSG00000241449
5	lnc-ATP6V0E2-2	chr7:149741839-149742195	NONHSAT124091
6	lnc-ATP6V0E2-2	chr7:149741839-149742195	NONHSAT124087
7	lnc-ATP6V0E2-2	chr7:149774721-149774910	ucscGeneNc_uc003whi_1
8	lnc-ATP6V0E2-2	chr7:149732185-149732207	NONHSAT124087
9	lnc-ATP6V0E2-2	chr7:149771062-149771172	ENSG00000241449
10	lnc-ATP6V0E2-2	chr7:149738452-149738550	NONHSAT124091
11	lnc-ATP6V0E2-2	chr7:149771062-149771465	ENSG00000241449
12	lnc-ATP6V0E2-2	chr7:149761675-149761850	ucscGeneNc_uc003whi_1
13	lnc-ATP6V0E2-2	chr7:149735636-149735802	NONHSAT124088
14	lnc-ATP6V0E2-2	chr7:149770706-149770828	ENSG00000241449
15	lnc-ATP6V0E2-2	chr7:149737610-149737743	ENSG00000241449
16	lnc-ATP6V0E2-2	chr7:149770570-149771181	ucscGeneNc_uc003whi_1
17	lnc-ATP6V0E2-2	chr7:149775097-149776161	ucscGeneNc_uc003whi_1
18	lnc-ATP6V0E2-2	chr7:149741839-149742195	NONHSAT124088
19	lnc-ATP6V0E2-2	chr7:149737556-149737743	NONHSAT124091

Variant related genes	Relation type
ENSG00000241449	TF binding region
ENSG00000241449	CpG island

Extended variants
information (count: 3544 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:3544 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7801784	chr7:149720852-149720853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs377673625	chr7:149720875-149720876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs200452170	chr7:149720887-149720888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs142870164	chr7:149720922-149720923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs28684679	chr7:149720942-149720943	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs539050575	chr7:149720997-149720998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs145277953	chr7:149720998-149720999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs10272820	chr7:149720999-149721000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs10229275	chr7:149721006-149721007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs538350847	chr7:149721016-149721017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs10229276	chr7:149721025-149721026	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs142065206	chr7:149721038-149721039	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs534382204	chr7:149721039-149721040	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs112525279	chr7:149721138-149721139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs62503323	chr7:149721169-149721170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs62501567	chr7:149721186-149721187	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs62501568	chr7:149721190-149721191	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs112550699	chr7:149721198-149721199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs73725958	chr7:149721208-149721209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs141362549	chr7:149721232-149721233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs541529266	chr7:149721240-149721241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs55713470	chr7:149721244-149721245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs145138470	chr7:149721252-149721253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs527515170	chr7:149721257-149721258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs369936453	chr7:149721270-149721271	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs138949981	chr7:149721347-149721348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs2449732	chr7:149721355-149721356	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs550009004	chr7:149721357-149721358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs190090673	chr7:149721404-149721405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs556851892	chr7:149721408-149721409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs548739502	chr7:149721409-149721410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs181742355	chr7:149721451-149721452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs2628734	chr7:149721474-149721475	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs568552394	chr7:149721486-149721487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs534425008	chr7:149721488-149721489	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs148107804	chr7:149721497-149721498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs2449733	chr7:149721526-149721527	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs577334049	chr7:149721587-149721588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs2628735	chr7:149721596-149721597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs556772788	chr7:149721661-149721662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs545596558	chr7:149721683-149721684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs575681236	chr7:149721691-149721692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs541418510	chr7:149721692-149721693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs561472100	chr7:149721719-149721720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs564263201	chr7:149721744-149721745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs572940252	chr7:149721757-149721758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs541084424	chr7:149721775-149721776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs564132877	chr7:149721787-149721788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs28485686	chr7:149721796-149721797	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs75648243	chr7:149721801-149721802	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Myelodysplastic syndrome	17634407	CNVD
Multiple myeloma	16461302	CNVD
Neuroblastoma	18923191	CNVD
Schizophrenia	17646849	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	16864856	CNVD
Autism	20808228	CNVD
Breast cancer	21509527	CNVD
Ovarian cancer	21720365	CNVD
Heart disease	21282601	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Lobular carcinoma	20920651	CNVD
Long-qt syndrome	20920651	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Liver carcinoma	19366792	CNVD
Long-qt syndrome	17576883	CNVD
Bradycardia syndrome	17576883	CNVD
Sudden cardiac death	19188705	CNVD
renal disease	17924346	CNVD
Ovarian cancer	21781307	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:469 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:149701000-149727800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr7:149721800-149722200	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr7:149727800-149730200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr7:149729600-149730600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr7:149730200-149744000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr7:149730600-149731000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:149733000-149744000	Weak transcription	Right Atrium	heart
8	chr7:149737000-149737200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr7:149741800-149742000	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr7:149742200-149742400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr7:149742200-149742600	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr7:149742600-149743000	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr7:149743000-149743200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
14	chr7:149743000-149743200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
15	chr7:149743000-149743200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
16	chr7:149743000-149743200	Enhancers	Pancreatic Islets	Pancreatic Islet
17	chr7:149743200-149744000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr7:149743200-149744000	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr7:149743400-149743600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
20	chr7:149743400-149743600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr7:149743400-149744800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
22	chr7:149743400-149745200	Weak transcription	Colon Smooth Muscle	Colon
23	chr7:149743600-149743800	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
24	chr7:149743600-149744000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
25	chr7:149743800-149744000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
26	chr7:149743800-149744400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr7:149743800-149746600	Active TSS	Brain Anterior Caudate	brain
28	chr7:149744000-149744200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
29	chr7:149744000-149744200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr7:149744000-149744200	Active TSS	Cortex derived primary cultured neurospheres	brain
31	chr7:149744000-149744200	Enhancers	Fetal Brain Male	brain
32	chr7:149744000-149744400	Active TSS	Brain Germinal Matrix	brain
33	chr7:149744000-149744600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
34	chr7:149744000-149745600	Active TSS	Right Atrium	heart
35	chr7:149744000-149745800	Active TSS	Stomach Smooth Muscle	stomach
36	chr7:149744000-149746200	Active TSS	Brain Hippocampus Middle	brain
37	chr7:149744000-149746400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
38	chr7:149744000-149746400	Active TSS	Fetal Brain Female	brain
39	chr7:149744000-149746400	Active TSS	HepG2	liver
40	chr7:149744000-149746600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
41	chr7:149744000-149746600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
42	chr7:149744000-149746600	Active TSS	Pancreatic Islets	Pancreatic Islet
43	chr7:149744000-149746800	Active TSS	H9 Cell Line	embryonic stem cell
44	chr7:149744000-149746800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
45	chr7:149744000-149746800	Active TSS	Breast Myoepithelial Primary Cells	Breast
46	chr7:149744200-149744400	Enhancers	Primary T helper cells fromperipheralblood	blood
47	chr7:149744200-149744400	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
48	chr7:149744200-149744400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr7:149744200-149744600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr7:149744200-149744600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links