Variant report

Variant	nsv889721
Chromosome Location	chr8:1756800-1815639
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:961)
CpG islands
(count:7210)
Chromatin interactive
region (count:46)
LncRNA
region (count:0)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:961 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:1778106-1778154	K562	blood:	n/a	n/a
2	ATF3	chr8:1771806-1772022	H1-hESC	embryonic stem cell:	n/a	chr8:1771884-1771893 chr8:1771940-1771960 chr8:1771940-1771949
3	ATF3	chr8:1771788-1772056	K562	blood:	n/a	chr8:1771884-1771893 chr8:1771940-1771960 chr8:1771940-1771949
4	BACH1	chr8:1777522-1777722	K562	blood:	n/a	n/a
5	BACH1	chr8:1786794-1788094	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr8:1771322-1772099	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr8:1777228-1777861	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr8:1792557-1792581	K562	blood:	n/a	n/a
9	BACH1	chr8:1772500-1772545	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr8:1789055-1789249	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL3	chr8:1802840-1803070	GM12878	blood:	n/a	n/a
12	BCL3	chr8:1802755-1803054	GM12878	blood:	n/a	n/a
13	BCL3	chr8:1799177-1799567	GM12878	blood:	n/a	n/a
14	BCL3	chr8:1799220-1799673	GM12878	blood:	n/a	n/a
15	BHLHE40	chr8:1771338-1771455	K562	blood:	n/a	n/a
16	BHLHE40	chr8:1777502-1777862	K562	blood:	n/a	n/a
17	BHLHE40	chr8:1771793-1772093	K562	blood:	n/a	n/a
18	BRCA1	chr8:1792449-1792452	HepG2	liver:	n/a	n/a
19	BRCA1	chr8:1771884-1772159	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr8:1792391-1792629	GM12878	blood:	n/a	n/a
21	CBX3	chr8:1771260-1771580	K562	blood:	n/a	n/a
22	CBX3	chr8:1771711-1772165	K562	blood:	n/a	n/a
23	CBX3	chr8:1792450-1792695	K562	blood:	n/a	n/a
24	CCNT2	chr8:1794192-1794427	K562	blood:	n/a	n/a
25	CCNT2	chr8:1771724-1772142	K562	blood:	n/a	chr8:1771784-1771793
26	CCNT2	chr8:1777538-1777751	K562	blood:	n/a	n/a
27	CEBPB	chr8:1803442-1803770	K562	blood:	n/a	n/a
28	CEBPB	chr8:1768611-1768802	HepG2	liver:	n/a	n/a
29	CEBPB	chr8:1771263-1771598	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr8:1768456-1768774	K562	blood:	n/a	n/a
31	CEBPB	chr8:1791838-1791972	HepG2	liver:	n/a	chr8:1791884-1791895
32	CEBPB	chr8:1762412-1762469	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr8:1771812-1772111	Hela-S3	cervix:	n/a	n/a
34	CHD2	chr8:1771333-1772203	H1-hESC	embryonic stem cell:	n/a	chr8:1771616-1771626 chr8:1771785-1771795
35	CHD2	chr8:1792600-1792732	HepG2	liver:	n/a	n/a
36	CHD2	chr8:1789068-1789300	H1-hESC	embryonic stem cell:	n/a	n/a
37	CHD2	chr8:1771658-1772195	K562	blood:	n/a	chr8:1771785-1771795
38	CHD2	chr8:1792554-1792562	Hela-S3	cervix:	n/a	n/a
39	CHD2	chr8:1771333-1772575	Hela-S3	cervix:	n/a	chr8:1772438-1772448 chr8:1772508-1772518 chr8:1771616-1771626 chr8:1771785-1771795 chr8:1772352-1772362
40	CREB1	chr8:1771286-1771573	A549	lung:	n/a	n/a
41	CREB1	chr8:1771668-1772168	A549	lung:	n/a	n/a
42	CREB1	chr8:1771616-1772282	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr8:1765035-1765490	H1-hESC	embryonic stem cell:	n/a	n/a
44	CREB1	chr8:1765051-1765569	H1-hESC	embryonic stem cell:	n/a	n/a
45	CTBP2	chr8:1771575-1772007	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr8:1777780-1777930	HEEpiC	esophagus:	n/a	n/a
47	CTCF	chr8:1775060-1775210	HRE	kidney:	n/a	n/a
48	CTCF	chr8:1789120-1789270	HRE	kidney:	n/a	n/a
49	CTCF	chr8:1785836-1785990	K562	blood:	n/a	chr8:1785903-1785916 chr8:1785900-1785918
50	CTCF	chr8:1770431-1770602	K562	blood:	n/a	n/a

(count:7210 , 50 per page) page: 1 2 3 4 5 6 7 ... 145

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:1789288-1789338	H1-hESC	embryonic stem cell:	embryo
2	chr8:1814835-1814885	GM06990	blood:	n/a
3	chr8:1785958-1786008	HCM	heart:	n/a
4	chr8:1762177-1762227	HPAEpiC	pulmonary alveolar:	n/a
5	chr8:1810297-1810347	HRCEpiC	kidney:	n/a
6	chr8:1812138-1812188	NHBE	bronchial:	n/a
7	chr8:1765217-1765267	ECC-1	luminal epithelium:	n/a
8	chr8:1812034-1812084	HCT-116	colon:	n/a
9	chr8:1789670-1789720	H1-hESC	embryonic stem cell:	embryo
10	chr8:1808475-1808525	HPAEpiC	pulmonary alveolar:	n/a
11	chr8:1778042-1778092	MCF10A-Er-Src	breast:	n/a
12	chr8:1783980-1784030	HEEpiC	esophagus:	n/a
13	chr8:1789288-1789338	H1-hESC	embryonic stem cell:	embryo
14	chr8:1814835-1814885	GM06990	blood:	n/a
15	chr8:1785958-1786008	HCM	heart:	n/a
16	chr8:1762177-1762227	HPAEpiC	pulmonary alveolar:	n/a
17	chr8:1810297-1810347	HRCEpiC	kidney:	n/a
18	chr8:1812138-1812188	NHBE	bronchial:	n/a
19	chr8:1765217-1765267	ECC-1	luminal epithelium:	n/a
20	chr8:1812034-1812084	HCT-116	colon:	n/a
21	chr8:1789670-1789720	H1-hESC	embryonic stem cell:	embryo
22	chr8:1808475-1808525	HPAEpiC	pulmonary alveolar:	n/a
23	chr8:1778042-1778092	MCF10A-Er-Src	breast:	n/a
24	chr8:1783980-1784030	HEEpiC	esophagus:	n/a
25	chr8:1772116-1772166	PrEC	prostate:	n/a
26	chr8:1764618-1764668	Hepatocyte	liver:	n/a
27	chr8:1762392-1762442	SK-N-SH	brain:	n/a
28	chr8:1765387-1765437	CMK	blood:	n/a
29	chr8:1815101-1815151	A549	lung:	n/a
30	chr8:1767962-1768012	BJ	skin:	n/a
31	chr8:1777766-1777816	AG09309	skin:	n/a
32	chr8:1796676-1796726	SK-N-MC	brain:	n/a
33	chr8:1786207-1786257	GM12891	blood:	n/a
34	chr8:1815153-1815203	PFSK-1	brain:	n/a
35	chr8:1779818-1779868	HIPEpiC	eye:	n/a
36	chr8:1815153-1815203	AG04450	lung:	fetal
37	chr8:1787150-1787200	Hepatocyte	liver:	n/a
38	chr8:1809920-1809970	HCM	heart:	n/a
39	chr8:1809112-1809162	BE2_C	brain:	n/a
40	chr8:1811760-1811810	NHDF-neo	bronchial:	n/a
41	chr8:1765312-1765362	Jurkat	blood:	n/a
42	chr8:1814932-1814982	LNCaP	prostate:	n/a
43	chr8:1765309-1765359	GM12878	blood:	n/a
44	chr8:1789463-1789513	PrEC	prostate:	n/a
45	chr8:1813963-1814013	HMEC	breast:	n/a
46	chr8:1797886-1797936	AG04450	lung:	fetal
47	chr8:1777766-1777816	AG04450	lung:	fetal
48	chr8:1811760-1811810	MCF10A-Er-Src	breast:	n/a
49	chr8:1789670-1789720	LNCaP	prostate:	n/a
50	chr8:1813992-1814042	SK-N-SH_RA	brain:	n/a

(count:46 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:1768039..1769894-chr8:1773535..1776325,2	MCF-7	breast:
2	chr8:1711323..1713781-chr8:1804428..1806395,2	MCF-7	breast:
3	chr8:1791902..1794095-chr8:1800796..1802523,2	K562	blood:
4	chr19:39574470..39577467-chr8:1791052..1792928,2	MCF-7	breast:
5	chr8:1778222..1780570-chr8:1782075..1784994,4	MCF-7	breast:
6	chr8:1770343..1774803-chr8:1776185..1779512,9	MCF-7	breast:
7	chr8:1784051..1785744-chr8:1790168..1791878,2	MCF-7	breast:
8	chr8:1764550..1766629-chr8:1770415..1772487,2	K562	blood:
9	chr8:1791902..1793927-chr8:1800796..1802494,2	K562	blood:
10	chr8:1731431..1734296-chr8:1777100..1779564,2	MCF-7	breast:
11	chr8:1772602..1774106-chr8:1775619..1777566,2	K562	blood:
12	chr8:1784051..1785744-chr8:1790168..1791878,2	MCF-7	breast:
13	chr8:1710918..1712882-chr8:1766102..1768969,2	K562	blood:
14	chr8:1770355..1772056-chr8:1783670..1785482,2	MCF-7	breast:
15	chr14:102430509..102431237-chr8:1771618..1772329,2	HCT-116	colon:
16	chr8:1708451..1710291-chr8:1769924..1772142,2	K562	blood:
17	chr8:1809191..1811307-chr8:1819741..1822402,2	K562	blood:
18	chr8:1770355..1772056-chr8:1783670..1785482,2	MCF-7	breast:
19	chr8:1766697..1768556-chr8:1771343..1773099,2	MCF-7	breast:
20	chr8:1791902..1793927-chr8:1800796..1802494,2	K562	blood:
21	chr8:1762249..1764109-chr8:1770396..1773299,2	K562	blood:
22	chr8:1710901..1715165-chr8:1763143..1767602,4	K562	blood:
23	chr8:1757521..1759166-chr8:1766213..1768564,2	K562	blood:
24	chr8:1790802..1792919-chr8:1794714..1797248,2	K562	blood:
25	chr8:1791902..1794095-chr8:1800796..1802523,2	K562	blood:
26	chr8:1711111..1712724-chr8:1772703..1775383,2	MCF-7	breast:
27	chr8:1772602..1774106-chr8:1775619..1777566,2	K562	blood:
28	chr8:1804701..1806345-chr8:1808982..1810841,2	MCF-7	breast:
29	chr8:1692125..1694169-chr8:1767018..1769382,2	MCF-7	breast:
30	chr8:1778222..1780570-chr8:1782075..1784994,4	MCF-7	breast:
31	chr8:1709347..1712341-chr8:1770235..1771752,2	MCF-7	breast:
32	chr8:1815516..1817789-chr8:1884960..1887477,2	K562	blood:
33	chr8:1693384..1695306-chr8:1757717..1760683,2	MCF-7	breast:
34	chr8:1757521..1759166-chr8:1766213..1768564,2	K562	blood:
35	chr8:1792966..1795761-chr8:1797297..1800005,2	MCF-7	breast:
36	chr8:1703592..1705221-chr8:1778659..1781628,2	MCF-7	breast:
37	chr8:1710415..1713375-chr8:1784468..1786850,2	MCF-7	breast:
38	chr8:1792966..1795761-chr8:1797297..1800005,2	MCF-7	breast:
39	chr8:1790802..1792919-chr8:1794714..1797248,2	K562	blood:
40	chr8:1764550..1766629-chr8:1770415..1772487,2	K562	blood:
41	chr8:1771136..1772958-chr8:1777807..1779958,2	K562	blood:
42	chr8:1804701..1806345-chr8:1808982..1810841,2	MCF-7	breast:
43	chr8:1757595..1759607-chr8:1771499..1773165,2	MCF-7	breast:
44	chr8:1769937..1771639-chr8:1774044..1776450,2	MCF-7	breast:
45	chr8:1719006..1721546-chr8:1758527..1761216,2	K562	blood:
46	chr8:1754619..1756376-chr8:1765622..1768454,2	K562	blood:

No data

miRNA name	Chromosome Location	mirBase accession
hsa-miR-596	chr8:1765412-1765432	MIMAT0003264

No data

Variant related genes	Relation type
ARHGEF10	TF binding region
MIR596	TF binding region
ARHGEF10	CpG island
MIR596	CpG island
ENSG00000253982	chromatin interactions
ENSG00000207826	chromatin interactions
ENSG00000182372	chromatin interactions
ENSG00000197102	chromatin interactions
ENSG00000104728	chromatin interactions
ENSG00000183760	chromatin interactions
LGALS3BP	Mature miRNA region

Extended variants
information (count: 3858 )
Associated
traits (count: 120 )

Variant overlapped rSNPs/rCNVs (count:3858 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7833068	chr8:1756800-1756801	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs544296770	chr8:1756810-1756811	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs140393506	chr8:1756815-1756816	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs532918368	chr8:1756818-1756819	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs560702022	chr8:1756852-1756853	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs546611465	chr8:1756855-1756856	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs115040901	chr8:1756876-1756877	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs529151261	chr8:1756887-1756888	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs112838329	chr8:1756925-1756926	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs7817613	chr8:1756930-1756931	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs537668676	chr8:1756992-1756993	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs386720681	chr8:1757022-1757023	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs7834537	chr8:1757023-1757024	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs539583428	chr8:1757035-1757036	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs553088832	chr8:1757039-1757040	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs573224110	chr8:1757056-1757057	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs184638821	chr8:1757060-1757061	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs7821455	chr8:1757065-1757066	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs11316071	chr8:1757088-1757089	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs188253257	chr8:1757124-1757125	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs544832184	chr8:1757130-1757131	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs564711838	chr8:1757153-1757154	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs116261356	chr8:1757168-1757169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs531988392	chr8:1757220-1757221	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs56107456	chr8:1757248-1757249	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs56021649	chr8:1757273-1757274	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs117536061	chr8:1757276-1757277	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs548975921	chr8:1757282-1757283	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs370138964	chr8:1757285-1757286	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs180818725	chr8:1757308-1757309	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs531362468	chr8:1757309-1757310	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs551149913	chr8:1757319-1757320	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs571155140	chr8:1757334-1757335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs150338993	chr8:1757336-1757337	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs370572566	chr8:1757367-1757368	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs7833959	chr8:1757391-1757392	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs184938512	chr8:1757529-1757530	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs10097786	chr8:1757547-1757548	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs189687301	chr8:1757564-1757565	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs576001891	chr8:1757571-1757572	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs145008454	chr8:1757590-1757591	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs558364013	chr8:1757602-1757603	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs578233014	chr8:1757605-1757606	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs539913661	chr8:1757618-1757619	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs549987080	chr8:1757628-1757629	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs140585079	chr8:1757647-1757648	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs573509336	chr8:1757657-1757658	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs181729475	chr8:1757679-1757680	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs562184869	chr8:1757690-1757691	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs531497713	chr8:1757718-1757719	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:120)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Cancer	18840272	CNVD
Pilocytic astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	20729466	CNVD
Ductal carcinoma	22052326	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Breast cancer	20932292	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Ependymoma	20639864	CNVD
Ovarian cancer	22355333	CNVD
Schizophrenia	23813976	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Lung adenocarcinoma	21935476	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2648 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:1747400-1761600	Weak transcription	Pancreas	Pancrea
2	chr8:1749000-1757400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr8:1750400-1761000	Weak transcription	Brain Anterior Caudate	brain
4	chr8:1750800-1757200	Weak transcription	Left Ventricle	heart
5	chr8:1750800-1765000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:1751000-1759800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr8:1751400-1761200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr8:1752000-1759400	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr8:1752000-1759400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:1753400-1756800	Weak transcription	HUVEC	blood vessel
11	chr8:1753400-1759800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr8:1753400-1761200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:1753400-1761400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:1753400-1761600	Weak transcription	Spleen	Spleen
15	chr8:1753600-1757600	Weak transcription	Primary neutrophils fromperipheralblood	blood
16	chr8:1754800-1757200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr8:1756400-1761400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr8:1756800-1758200	Enhancers	HUVEC	blood vessel
19	chr8:1757200-1757400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr8:1757200-1758000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr8:1757200-1758000	Enhancers	Left Ventricle	heart
22	chr8:1757200-1758200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr8:1757200-1758200	Enhancers	Brain Cingulate Gyrus	brain
24	chr8:1757400-1757600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
25	chr8:1757400-1757800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr8:1757400-1757800	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr8:1757400-1757800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr8:1757400-1758000	Enhancers	Adipose Nuclei	Adipose
29	chr8:1757400-1758000	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr8:1757400-1758200	Enhancers	Brain Hippocampus Middle	brain
31	chr8:1757600-1758000	Enhancers	Primary neutrophils fromperipheralblood	blood
32	chr8:1757600-1758000	Enhancers	Brain Substantia Nigra	brain
33	chr8:1757800-1758000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr8:1757800-1758000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr8:1757800-1758000	Enhancers	Right Atrium	heart
36	chr8:1758000-1759400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr8:1758000-1760800	Weak transcription	Brain Inferior Temporal Lobe	brain
38	chr8:1758000-1761000	Weak transcription	Brain Substantia Nigra	brain
39	chr8:1758000-1762000	Weak transcription	Right Atrium	heart
40	chr8:1758000-1762200	Weak transcription	Adipose Nuclei	Adipose
41	chr8:1758000-1765000	Weak transcription	Left Ventricle	heart
42	chr8:1758200-1761000	Weak transcription	Brain Hippocampus Middle	brain
43	chr8:1758200-1761200	Weak transcription	Brain Cingulate Gyrus	brain
44	chr8:1758200-1761400	Weak transcription	HUVEC	blood vessel
45	chr8:1759200-1759400	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr8:1759200-1759400	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr8:1759200-1760200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr8:1759400-1759600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
49	chr8:1759400-1760200	Enhancers	H1 Cell Line	embryonic stem cell
50	chr8:1759400-1760200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links