Variant report

Variant	nsv890056
Chromosome Location	chr8:6314486-6343727
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:213)
CpG islands
(count:183)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:213 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:6323049-6323486	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:6321256-6321847	HepG2	liver:	n/a	n/a
3	BHLHE40	chr8:6321381-6321736	HepG2	liver:	n/a	n/a
4	BHLHE40	chr8:6321267-6321818	HepG2	liver:	n/a	n/a
5	BHLHE40	chr8:6321392-6321688	HepG2	liver:	n/a	n/a
6	CEBPB	chr8:6321407-6321684	HepG2	liver:	n/a	chr8:6321560-6321571
7	CEBPB	chr8:6321429-6321720	A549	lung:	n/a	chr8:6321560-6321571
8	CEBPB	chr8:6338927-6339192	IMR90	lung:	n/a	n/a
9	CEBPB	chr8:6321351-6321748	Hela-S3	cervix:	n/a	chr8:6321560-6321571
10	CEBPB	chr8:6338179-6338319	HepG2	liver:	n/a	n/a
11	CEBPB	chr8:6343211-6343297	K562	blood:	n/a	n/a
12	CEBPB	chr8:6337007-6337094	K562	blood:	n/a	n/a
13	CEBPB	chr8:6321383-6321746	HepG2	liver:	n/a	chr8:6321560-6321571
14	CEBPB	chr8:6321392-6321716	HepG2	liver:	n/a	chr8:6321560-6321571
15	CEBPD	chr8:6321400-6321655	HepG2	liver:	n/a	n/a
16	CHD2	chr8:6323036-6323221	HepG2	liver:	n/a	n/a
17	CHD2	chr8:6321514-6321747	HepG2	liver:	n/a	n/a
18	CTCF	chr8:6343096-6343237	K562	blood:	n/a	n/a
19	CTCF	chr8:6329920-6330070	Caco-2	colon:	n/a	n/a
20	CTCF	chr8:6320640-6320790	HPAF	blood vessel:	n/a	chr8:6320737-6320750
21	CTCF	chr8:6320620-6320770	HBMEC	blood vessel:	n/a	chr8:6320737-6320750
22	CTCF	chr8:6343138-6343203	HUVEC	blood vessel:	n/a	n/a
23	CTCF	chr8:6321289-6321480	HepG2	liver:	n/a	chr8:6321395-6321416
24	CTCF	chr8:6321307-6321456	Hela-S3	cervix:	n/a	chr8:6321395-6321416
25	CTCF	chr8:6321220-6321370	Caco-2	colon:	n/a	n/a
26	CTCF	chr8:6343125-6343258	Hela-S3	cervix:	n/a	n/a
27	CTCF	chr8:6320641-6320846	H1-hESC	embryonic stem cell:	n/a	chr8:6320737-6320750
28	CTCF	chr8:6320738-6320788	K562	blood:	n/a	n/a
29	CTCF	chr8:6321300-6321450	AG04449	skin:	n/a	chr8:6321395-6321416
30	CTCF	chr8:6343020-6343432	HCT-116	colon:	n/a	n/a
31	CTCF	chr8:6343006-6343262	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr8:6343155-6343176	GM12878	blood:	n/a	n/a
33	CTCF	chr8:6343127-6343150	GM10266	blood:	n/a	n/a
34	CTCF	chr8:6321340-6321490	HEEpiC	esophagus:	n/a	chr8:6321395-6321416
35	CTCF	chr8:6320640-6320905	K562	blood:	n/a	chr8:6320737-6320750
36	CTCF	chr8:6343145-6343225	MCF-7	breast:	n/a	n/a
37	CTCF	chr8:6321260-6321410	SK-N-SH_RA	brain:	n/a	n/a
38	CTCF	chr8:6321280-6321430	SAEC	small airway:	n/a	chr8:6321395-6321416
39	CTCF	chr8:6320720-6320870	BE2_C	brain:	n/a	chr8:6320737-6320750
40	CTCF	chr8:6320560-6320710	BE2_C	brain:	n/a	n/a
41	CTCF	chr8:6321240-6321390	HMEC	breast:	n/a	n/a
42	CTCF	chr8:6343072-6343290	K562	blood:	n/a	n/a
43	CTCF	chr8:6321320-6321470	HEEpiC	esophagus:	n/a	chr8:6321395-6321416
44	CTCF	chr8:6343060-6343210	WERI-Rb-1	eye:	n/a	n/a
45	E2F4	chr8:6321453-6321628	MCF10A-Er-Src	breast:	n/a	n/a
46	EP300	chr8:6321577-6321932	SK-N-SH_RA	brain:	n/a	n/a
47	EP300	chr8:6321469-6321698	HepG2	liver:	n/a	chr8:6321475-6321484
48	EP300	chr8:6321181-6321804	HepG2	liver:	n/a	chr8:6321475-6321484
49	EP300	chr8:6320308-6322328	SK-N-SH	brain:	n/a	chr8:6320956-6320970 chr8:6321475-6321484
50	EP300	chr8:6321310-6321810	HepG2	liver:	n/a	chr8:6321475-6321484

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:6321006-6321056	PrEC	prostate:	n/a
2	chr8:6321006-6321056	NB4	blood:	n/a
3	chr8:6328807-6328857	PrEC	prostate:	n/a
4	chr8:6321006-6321056	A549	lung:	n/a
5	chr8:6328807-6328857	HRPEpiC	eye:	n/a
6	chr8:6321006-6321056	PFSK-1	brain:	n/a
7	chr8:6321006-6321056	NT2-D1	testis:	n/a
8	chr8:6321006-6321056	HAEpiC	amniotic membrane:	n/a
9	chr8:6323131-6323181	LNCaP	prostate:	n/a
10	chr8:6321006-6321056	HL-60	blood:	n/a
11	chr8:6323131-6323181	HAEpiC	amniotic membrane:	n/a
12	chr8:6321006-6321056	ECC-1	luminal epithelium:	n/a
13	chr8:6321006-6321056	ProgFib	skin:	n/a
14	chr8:6321006-6321056	HMEC	breast:	n/a
15	chr8:6321006-6321056	BE2_C	brain:	n/a
16	chr8:6328807-6328857	ECC-1	luminal epithelium:	n/a
17	chr8:6328807-6328857	MCF10A-Er-Src	breast:	n/a
18	chr8:6323131-6323181	Hela-S3	cervix:	n/a
19	chr8:6328807-6328857	GM12891	blood:	n/a
20	chr8:6328807-6328857	HUVEC	blood vessel:	n/a
21	chr8:6323131-6323181	GM06990	blood:	n/a
22	chr8:6328807-6328857	AG04450	lung:	fetal
23	chr8:6321006-6321056	HepG2	liver:	n/a
24	chr8:6321006-6321056	RPTEC	kidney:	n/a
25	chr8:6323131-6323181	HCM	heart:	n/a
26	chr8:6323131-6323181	IMR90	lung:	fetal
27	chr8:6323131-6323181	HRPEpiC	eye:	n/a
28	chr8:6328807-6328857	HCM	heart:	n/a
29	chr8:6323131-6323181	HL-60	blood:	n/a
30	chr8:6328807-6328857	HCPEpiC	choroid plexus:	n/a
31	chr8:6321006-6321056	HCF	heart:	n/a
32	chr8:6323131-6323181	AG10803	skin:	n/a
33	chr8:6323131-6323181	PANC-1	pancreas:	n/a
34	chr8:6321006-6321056	GM12891	blood:	n/a
35	chr8:6323131-6323181	PFSK-1	brain:	n/a
36	chr8:6323131-6323181	AG09319	gingival:	n/a
37	chr8:6328807-6328857	HIPEpiC	eye:	n/a
38	chr8:6321006-6321056	NHBE	bronchial:	n/a
39	chr8:6323131-6323181	T-47D	breast:	n/a
40	chr8:6321006-6321056	AoSMC	blood vessel:	n/a
41	chr8:6321006-6321056	NHDF-neo	bronchial:	n/a
42	chr8:6321006-6321056	Hepatocyte	liver:	n/a
43	chr8:6328807-6328857	SAEC	small airway:	n/a
44	chr8:6323131-6323181	HCF	heart:	n/a
45	chr8:6328807-6328857	IMR90	lung:	fetal
46	chr8:6321006-6321056	CMK	blood:	n/a
47	chr8:6328807-6328857	A549	lung:	n/a
48	chr8:6328807-6328857	GM19239	blood:	n/a
49	chr8:6328807-6328857	HNPCEpiC	eye:	n/a
50	chr8:6328807-6328857	T-47D	breast:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:6326969..6329620-chr8:6343917..6345900,2	K562	blood:
2	chr8:6313067..6315249-chr8:6315975..6317705,2	MCF-7	breast:
3	chr8:6339705..6342364-chr8:6348069..6350911,2	K562	blood:
4	chr8:6327001..6332096-chr8:6332476..6335725,6	K562	blood:
5	chr8:6308680..6311330-chr8:6317325..6320400,3	K562	blood:
6	chr8:6340740..6343384-chr8:6345418..6348031,2	K562	blood:
7	chr8:6340740..6344062-chr8:6345418..6348031,3	K562	blood:
8	chr8:6313067..6315249-chr8:6315975..6317705,2	MCF-7	breast:
9	chr8:6286838..6288405-chr8:6317627..6319306,2	K562	blood:
10	chr8:6327001..6332096-chr8:6332476..6335725,6	K562	blood:
11	chr8:6311610..6314385-chr8:6324095..6326791,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000253550	TF binding region
MCPH1	TF binding region
ENSG00000253550	CpG island
MCPH1	CpG island
ENSG00000147316	chromatin interactions
ENSG00000253550	chromatin interactions

Extended variants
information (count: 1834 )
Associated
traits (count: 139 )

Variant overlapped rSNPs/rCNVs (count:1834 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2442502	chr8:6314486-6314487	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs544215960	chr8:6314498-6314499	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs80183577	chr8:6314510-6314511	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs574684158	chr8:6314532-6314533	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs375847526	chr8:6314559-6314560	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs61125865	chr8:6314577-6314578	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs572788916	chr8:6314612-6314613	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs541593893	chr8:6314637-6314638	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs559909035	chr8:6314663-6314664	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs61033996	chr8:6314812-6314813	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs545879366	chr8:6314819-6314820	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs61557173	chr8:6314834-6314835	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs75406121	chr8:6314851-6314852	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548580605	chr8:6314854-6314855	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs562204389	chr8:6314856-6314857	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs2920668	chr8:6314866-6314867	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs547822978	chr8:6314872-6314873	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs57388225	chr8:6314880-6314881	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs540065334	chr8:6314881-6314882	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs189530096	chr8:6314900-6314901	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs2920667	chr8:6314903-6314904	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs143748537	chr8:6314904-6314905	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs181803222	chr8:6314907-6314908	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12542108	chr8:6314921-6314922	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs1375669	chr8:6314922-6314923	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs534087494	chr8:6314932-6314933	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs186103691	chr8:6314933-6314934	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs576608772	chr8:6314935-6314936	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs55866516	chr8:6314992-6314993	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs113410793	chr8:6315009-6315010	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs150216322	chr8:6315029-6315030	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs541811882	chr8:6315032-6315033	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs117562667	chr8:6315036-6315037	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs561781569	chr8:6315070-6315071	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs370190254	chr8:6315081-6315082	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs548086990	chr8:6315088-6315089	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs543928568	chr8:6315116-6315117	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs11779815	chr8:6315139-6315140	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs533530276	chr8:6315144-6315145	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs549104675	chr8:6315157-6315158	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs375649823	chr8:6315167-6315168	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs550405581	chr8:6315178-6315179	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs117042144	chr8:6315189-6315190	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs537940078	chr8:6315192-6315193	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs548016971	chr8:6315205-6315206	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs568035736	chr8:6315208-6315209	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs533583167	chr8:6315217-6315218	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs553624052	chr8:6315228-6315229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs576745115	chr8:6315245-6315246	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371368328	chr8:6315269-6315270	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:139)

Disease	PMID	Source
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Breast cancer	21364760	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Cancer	20164919	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bladder cancer	21909424	CNVD
Autism	20685689	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Autism	20531469	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:818 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:6265000-6339200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:6287600-6344400	Weak transcription	Small Intestine	intestine
3	chr8:6301000-6338400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr8:6302800-6339800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:6303000-6317200	Weak transcription	Brain Substantia Nigra	brain
6	chr8:6303000-6317800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr8:6303000-6319400	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr8:6303000-6321000	Weak transcription	Psoas Muscle	Psoas
9	chr8:6303000-6321000	Weak transcription	Hela-S3	cervix
10	chr8:6303000-6322800	Weak transcription	Ovary	ovary
11	chr8:6303000-6322800	Weak transcription	Spleen	Spleen
12	chr8:6303000-6325000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr8:6303000-6325200	Weak transcription	Pancreas	Pancrea
14	chr8:6303000-6338200	Weak transcription	Gastric	stomach
15	chr8:6303000-6338200	Weak transcription	Rectal Smooth Muscle	rectum
16	chr8:6303000-6338400	Weak transcription	Colonic Mucosa	Colon
17	chr8:6303000-6338400	Weak transcription	Right Ventricle	heart
18	chr8:6303000-6339400	Weak transcription	Placenta	Placenta
19	chr8:6303200-6316800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr8:6303200-6318200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr8:6303200-6318800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr8:6303200-6320400	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr8:6303200-6321000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr8:6303200-6322600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
25	chr8:6303200-6322800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr8:6303200-6339400	Weak transcription	Primary hematopoietic stem cells	blood
27	chr8:6303200-6339400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
28	chr8:6303200-6340000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
29	chr8:6303400-6314600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
30	chr8:6303400-6320600	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr8:6303400-6320800	Weak transcription	Colon Smooth Muscle	Colon
32	chr8:6303400-6321000	Weak transcription	Brain Anterior Caudate	brain
33	chr8:6303400-6321200	Weak transcription	HUVEC	blood vessel
34	chr8:6303600-6321600	Weak transcription	Brain Germinal Matrix	brain
35	chr8:6303800-6338400	Weak transcription	Primary monocytes fromperipheralblood	blood
36	chr8:6304000-6322600	Weak transcription	Fetal Brain Female	brain
37	chr8:6304000-6338000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr8:6304400-6318200	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr8:6304400-6360200	Weak transcription	Esophagus	oesophagus
40	chr8:6304600-6317400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr8:6304600-6321200	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr8:6304800-6317200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr8:6304800-6323000	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr8:6305000-6317000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
45	chr8:6305000-6317000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr8:6305200-6316800	Weak transcription	Stomach Smooth Muscle	stomach
47	chr8:6305200-6320000	Weak transcription	Fetal Muscle Leg	muscle
48	chr8:6305800-6317200	Weak transcription	Brain Hippocampus Middle	brain
49	chr8:6305800-6319800	Weak transcription	Primary B cells from cord blood	blood
50	chr8:6305800-6322800	Weak transcription	Rectal Mucosa Donor 29	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links