Variant report

Variant	nsv890646
Chromosome Location	chr8:20714686-20843176
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:263)
CpG islands
(count:62)
Chromatin interactive
region (count:14)
LncRNA
region (count:64)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:263 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr8:20809628-20809937	K562	blood:	n/a	n/a
2	BACH1	chr8:20813151-20813198	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL3	chr8:20836598-20836879	GM12878	blood:	n/a	n/a
4	CCNT2	chr8:20809452-20809864	K562	blood:	n/a	chr8:20809683-20809703
5	CEBPB	chr8:20840086-20840263	HepG2	liver:	n/a	chr8:20840222-20840233
6	CEBPB	chr8:20768508-20768763	K562	blood:	n/a	chr8:20768654-20768665
7	CEBPB	chr8:20830066-20830350	HepG2	liver:	n/a	chr8:20830220-20830231
8	CEBPB	chr8:20733261-20733461	HepG2	liver:	n/a	chr8:20733368-20733379
9	CEBPB	chr8:20810953-20811181	K562	blood:	n/a	chr8:20811090-20811101
10	CEBPB	chr8:20810943-20811214	A549	lung:	n/a	chr8:20811090-20811101
11	CEBPB	chr8:20757415-20757431	A549	lung:	n/a	n/a
12	CEBPB	chr8:20809083-20809266	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr8:20795561-20795603	HepG2	liver:	n/a	n/a
14	CEBPB	chr8:20748795-20748932	A549	lung:	n/a	chr8:20748823-20748834
15	CEBPB	chr8:20810638-20811217	HepG2	liver:	n/a	chr8:20811090-20811101
16	CEBPB	chr8:20739346-20739560	HepG2	liver:	n/a	chr8:20739482-20739493
17	CEBPB	chr8:20810677-20811262	IMR90	lung:	n/a	chr8:20811090-20811101
18	CEBPB	chr8:20768496-20768814	HepG2	liver:	n/a	chr8:20768654-20768665
19	CEBPB	chr8:20748734-20748934	HepG2	liver:	n/a	chr8:20748823-20748834
20	CEBPB	chr8:20768506-20768831	A549	lung:	n/a	chr8:20768654-20768665
21	CEBPB	chr8:20830191-20830296	H1-hESC	embryonic stem cell:	n/a	chr8:20830220-20830231
22	CEBPB	chr8:20768532-20768761	IMR90	lung:	n/a	chr8:20768654-20768665
23	CEBPB	chr8:20724123-20724465	IMR90	lung:	n/a	chr8:20724312-20724325
24	CEBPB	chr8:20723288-20723516	IMR90	lung:	n/a	n/a
25	CEBPB	chr8:20723345-20723491	H1-hESC	embryonic stem cell:	n/a	n/a
26	CEBPD	chr8:20809504-20809904	K562	blood:	n/a	n/a
27	CEBPD	chr8:20809552-20809922	K562	blood:	n/a	n/a
28	CTCF	chr8:20750160-20750310	AG04449	skin:	n/a	n/a
29	CTCF	chr8:20790300-20790450	HRE	kidney:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
30	CTCF	chr8:20746760-20746910	Caco-2	colon:	n/a	n/a
31	CTCF	chr8:20753420-20753570	HepG2	liver:	n/a	n/a
32	CTCF	chr8:20720420-20720570	GM12872	blood:	n/a	n/a
33	CTCF	chr8:20790332-20790386	LNCaP	prostate:	n/a	chr8:20790365-20790383
34	CTCF	chr8:20790280-20790430	K562	blood:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
35	CTCF	chr8:20720500-20720593	LNCaP	prostate:	n/a	n/a
36	CTCF	chr8:20790325-20790394	Hela-S3	cervix:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
37	CTCF	chr8:20746424-20746471	Kidney_OC	kidney:	n/a	n/a
38	CTCF	chr8:20746796-20746958	Pancreas_OC	pancreas:	n/a	n/a
39	CTCF	chr8:20790235-20790463	K562	blood:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
40	CTCF	chr8:20814895-20814944	GM13977	blood:	n/a	n/a
41	CTCF	chr8:20790320-20790470	NB4	blood:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
42	CTCF	chr8:20790332-20790438	K562	blood:	n/a	chr8:20790367-20790388 chr8:20790365-20790383
43	CTCF	chr8:20746800-20746950	WERI-Rb-1	eye:	n/a	n/a
44	CTCF	chr8:20746847-20746920	K562	blood:	n/a	n/a
45	CTCF	chr8:20750148-20750160	ProgFib	skin:	n/a	n/a
46	CTCF	chr8:20792228-20792283	K562	blood:	n/a	n/a
47	CTCF	chr8:20803360-20803510	GM12865	blood:	n/a	n/a
48	CTCF	chr8:20750200-20750350	AG04449	skin:	n/a	n/a
49	CTCF	chr8:20746835-20746903	K562	blood:	n/a	n/a
50	CTCF	chr8:20790280-20790430	WERI-Rb-1	eye:	n/a	chr8:20790367-20790388 chr8:20790365-20790383

(count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:20725345-20725395	IMR90	lung:	fetal
2	chr8:20725345-20725395	IMR90	lung:	fetal
3	chr8:20725345-20725395	HRPEpiC	eye:	n/a
4	chr8:20725345-20725395	Hepatocyte	liver:	n/a
5	chr8:20725345-20725395	HEEpiC	esophagus:	n/a
6	chr8:20725345-20725395	AG10803	skin:	n/a
7	chr8:20725345-20725395	LNCaP	prostate:	n/a
8	chr8:20725345-20725395	SAEC	small airway:	n/a
9	chr8:20725345-20725395	HRCEpiC	kidney:	n/a
10	chr8:20725345-20725395	HIPEpiC	eye:	n/a
11	chr8:20725345-20725395	BE2_C	brain:	n/a
12	chr8:20725345-20725395	HEK293	kidney:	embryo
13	chr8:20725345-20725395	PFSK-1	brain:	n/a
14	chr8:20725345-20725395	HCPEpiC	choroid plexus:	n/a
15	chr8:20725345-20725395	HL-60	blood:	n/a
16	chr8:20725345-20725395	Jurkat	blood:	n/a
17	chr8:20725345-20725395	NH-A	brain:	n/a
18	chr8:20725345-20725395	ECC-1	luminal epithelium:	n/a
19	chr8:20725345-20725395	MCF-7	breast:	n/a
20	chr8:20725345-20725395	K562	blood:	n/a
21	chr8:20725345-20725395	PANC-1	pancreas:	n/a
22	chr8:20725345-20725395	AoSMC	blood vessel:	n/a
23	chr8:20725345-20725395	SKMC	muscle:	n/a
24	chr8:20725345-20725395	Hela-S3	cervix:	n/a
25	chr8:20725345-20725395	NHBE	bronchial:	n/a
26	chr8:20725345-20725395	AG04449	skin:	fetal
27	chr8:20725345-20725395	ovcar-3	ovarian:	n/a
28	chr8:20725345-20725395	GM06990	blood:	n/a
29	chr8:20725345-20725395	MCF10A-Er-Src	breast:	n/a
30	chr8:20725345-20725395	GM12878	blood:	n/a
31	chr8:20725345-20725395	NB4	blood:	n/a
32	chr8:20725345-20725395	NHDF-neo	bronchial:	n/a
33	chr8:20725345-20725395	CMK	blood:	n/a
34	chr8:20725345-20725395	AG09309	skin:	n/a
35	chr8:20725345-20725395	ProgFib	skin:	n/a
36	chr8:20725345-20725395	RPTEC	kidney:	n/a
37	chr8:20725345-20725395	Caco-2	colon:	n/a
38	chr8:20725345-20725395	SK-N-SH_RA	brain:	n/a
39	chr8:20725345-20725395	SK-N-SH	brain:	n/a
40	chr8:20725345-20725395	HNPCEpiC	eye:	n/a
41	chr8:20725345-20725395	GM19239	blood:	n/a
42	chr8:20725345-20725395	PrEC	prostate:	n/a
43	chr8:20725345-20725395	HRE	kidney:	n/a
44	chr8:20725345-20725395	U87	brain:	n/a
45	chr8:20725345-20725395	H1-hESC	embryonic stem cell:	embryo
46	chr8:20725345-20725395	HCM	heart:	n/a
47	chr8:20725345-20725395	A549	lung:	n/a
48	chr8:20725345-20725395	HepG2	liver:	n/a
49	chr8:20725345-20725395	T-47D	breast:	n/a
50	chr8:20725345-20725395	GM12892	blood:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:20767548..20769104-chr8:20769526..20772463,2	MCF-7	breast:
2	chr8:20724387..20726387-chr8:20728763..20730962,2	K562	blood:
3	chr8:20737626..20740045-chr8:20787296..20789914,2	K562	blood:
4	chr8:20767548..20769104-chr8:20769526..20772463,2	MCF-7	breast:
5	chr20:55800391..55800924-chr8:20778716..20779696,2	MCF-7	breast:
6	chr8:20750920..20753775-chr8:20759115..20761137,3	K562	blood:
7	chr8:20781724..20783659-chr8:20784151..20785678,2	K562	blood:
8	chr8:20806761..20808497-chr8:20810222..20812992,2	K562	blood:
9	chr8:20737626..20740045-chr8:20787296..20789914,2	K562	blood:
10	chr8:20750920..20753775-chr8:20759115..20761137,3	K562	blood:
11	chr8:20831135..20833950-chr8:20835824..20837842,2	K562	blood:
12	chr8:20839365..20841858-chr8:20843930..20846390,2	K562	blood:
13	chr8:20781724..20783659-chr8:20784151..20785678,2	K562	blood:
14	chr8:20724387..20726387-chr8:20728763..20730962,2	K562	blood:

(count:64 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATP6V1B2-5	chr8:20813196-20813345	ENSG00000253147
2	lnc-LZTS1-2	chr8:20810159-20810427	XLOC_007018
3	lnc-LZTS1-2	chr8:20812166-20812283	XLOC_007018
4	lnc-ATP6V1B2-5	chr8:20831896-20832033	XLOC_006734
5	lnc-ATP6V1B2-5	chr8:20811352-20811590	XLOC_006734
6	lnc-ATP6V1B2-4	chr8:20800453-20800763	ENSG00000254260
7	lnc-LZTS1-2	chr8:20810156-20810427	ENSG00000254092
8	lnc-ATP6V1B2-5	chr8:20811352-20811590	ENSG00000253147
9	lnc-ATP6V1B2-5	chr8:20813196-20813346	XLOC_006734
10	lnc-ATP6V1B2-5	chr8:20811352-20811586	XLOC_006734
11	lnc-ATP6V1B2-5	chr8:20810638-20811007	ENSG00000253147
12	lnc-ATP6V1B2-5	chr8:20826298-20826482	NONHSAT125418
13	lnc-ATP6V1B2-5	chr8:20811154-20811204	XLOC_006734
14	lnc-ATP6V1B2-5	chr8:20813195-20813631	NONHSAT125407
15	lnc-ATP6V1B2-5	chr8:20811523-20811586	ENSG00000254026
16	lnc-ATP6V1B2-5	chr8:20831860-20832033	XLOC_006734
17	lnc-ATP6V1B2-5	chr8:20840968-20841617	XLOC_006734
18	lnc-ATP6V1B2-5	chr8:20813196-20813347	XLOC_006734
19	lnc-ATP6V1B2-5	chr8:20811153-20811204	ENSG00000253147
20	lnc-ATP6V1B2-5	chr8:20813385-20813631	ENSG00000254026
21	lnc-ATP6V1B2-5	chr8:20826298-20826415	ENSG00000253147
22	lnc-ATP6V1B2-5	chr8:20832315-20832540	ENSG00000253199
23	lnc-ATP6V1B2-5	chr8:20826298-20826427	XLOC_006734
24	lnc-ATP6V1B2-4	chr8:20798939-20799011	ENSG00000254260
25	lnc-ATP6V1B2-5	chr8:20810025-20810427	NONHSAT125407
26	lnc-ATP6V1B2-5	chr8:20831308-20832033	ENSG00000253199
27	lnc-LZTS1-2	chr8:20810159-20810427	XLOC_007018
28	lnc-ATP6V1B2-5	chr8:20820076-20820412	NONHSAT125407
29	lnc-ATP6V1B2-5	chr8:20820292-20820412	ENSG00000254026
30	lnc-LZTS1-2	chr8:20831244-20831388	ENSG00000254092
31	lnc-ATP6V1B2-5	chr8:20820292-20820412	ENSG00000253147
32	lnc-ATP6V1B2-5	chr8:20811352-20811586	XLOC_006734
33	lnc-ATP6V1B2-5	chr8:20811352-20811586	ENSG00000253147
34	lnc-ATP6V1B2-5	chr8:20812726-20812776	NONHSAT125407
35	lnc-ATP6V1B2-5	chr8:20820292-20820412	XLOC_006734
36	lnc-ATP6V1B2-5	chr8:20812165-20812283	NONHSAT125407
37	lnc-ATP6V1B2-5	chr8:20831248-20831509	XLOC_006734
38	lnc-ATP6V1B2-5	chr8:20813196-20813347	XLOC_006734
39	lnc-LZTS1-2	chr8:20810905-20811014	XLOC_007018
40	lnc-ATP6V1B2-5	chr8:20832315-20832533	XLOC_006734
41	lnc-ATP6V1B2-5	chr8:20826298-20826415	ENSG00000254026
42	lnc-ATP6V1B2-5	chr8:20825695-20826830	NONHSAT125407
43	lnc-ATP6V1B2-5	chr8:20811154-20811204	XLOC_006734
44	lnc-ATP6V1B2-5	chr8:20810937-20811204	XLOC_006734
45	lnc-ATP6V1B2-4	chr8:20807598-20807686	ENSG00000254260
46	lnc-ATP6V1B2-5	chr8:20811351-20811590	NONHSAT125407
47	lnc-ATP6V1B2-5	chr8:20832315-20832514	XLOC_006734
48	lnc-ATP6V1B2-5	chr8:20810638-20811204	NONHSAT125407
49	lnc-ATP6V1B2-5	chr8:20820144-20820412	NONHSAT125418
50	lnc-ATP6V1B2-4	chr8:20806210-20806304	ENSG00000254260

No data

Variant related genes	Relation type
ENSG00000253199	TF binding region
ENSG00000254260	TF binding region
TMEM97P2	TF binding region
ENSG00000254026	TF binding region
ENSG00000254092	TF binding region
ENSG00000253147	TF binding region
ENSG00000253199	CpG island
ENSG00000254260	CpG island
TMEM97P2	CpG island
ENSG00000254026	CpG island
ENSG00000254092	CpG island
ENSG00000253147	CpG island
ENSG00000253199	chromatin interactions
ENSG00000253147	chromatin interactions
ENSG00000254092	chromatin interactions
ENSG00000254026	chromatin interactions
CAB39	miRNA target sites
RAB14	miRNA target sites
BMPR2	miRNA target sites
GRB2	miRNA target sites
TP53	miRNA target sites
LDLR	miRNA target sites
SCD	miRNA target sites
SCARB1	miRNA target sites
HIF1AN	miRNA target sites

Extended variants
information (count: 3636 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:3636 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs549299580	chr8:20721605-20721606	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs530100979	chr8:20721637-20721638	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs188800034	chr8:20721638-20721639	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs370133676	chr8:20721639-20721640	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs34556713	chr8:20721643-20721644	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs567426529	chr8:20721653-20721654	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs534825787	chr8:20721654-20721655	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs374456782	chr8:20721673-20721674	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs114505070	chr8:20721685-20721686	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs571741808	chr8:20721688-20721689	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs13277522	chr8:20721706-20721707	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs149963264	chr8:20721715-20721716	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs7462668	chr8:20721748-20721749	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs184706824	chr8:20721797-20721798	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs559168429	chr8:20721803-20721804	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs144976095	chr8:20721807-20721808	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571383328	chr8:20721864-20721865	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs573074570	chr8:20721902-20721903	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs540849719	chr8:20721928-20721929	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs559171824	chr8:20721936-20721937	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs577710612	chr8:20721937-20721938	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs544678279	chr8:20721939-20721940	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs201564510	chr8:20721953-20721954	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs563250350	chr8:20721972-20721973	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs530528623	chr8:20721980-20721981	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs540069261	chr8:20723010-20723011	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs532224251	chr8:20723012-20723013	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs551026193	chr8:20723035-20723036	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs78695346	chr8:20723061-20723062	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs564772003	chr8:20723062-20723063	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs532154215	chr8:20723090-20723091	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs566823559	chr8:20723190-20723191	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs534460890	chr8:20723191-20723192	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141259118	chr8:20723239-20723240	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs577331863	chr8:20723256-20723257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs538075020	chr8:20723329-20723330	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs146927663	chr8:20723336-20723337	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs575443455	chr8:20723345-20723346	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs562631220	chr8:20723380-20723381	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs529751563	chr8:20723389-20723390	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs547924536	chr8:20723404-20723405	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs542635122	chr8:20723412-20723413	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs369289170	chr8:20723421-20723422	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs73668250	chr8:20723478-20723479	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs540479467	chr8:20723479-20723480	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs191649126	chr8:20723487-20723488	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs74492280	chr8:20723493-20723494	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs7838477	chr8:20723510-20723511	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs62496935	chr8:20723517-20723518	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs184239845	chr8:20723545-20723546	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Epilepsy	22083797	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	17603634	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21364760	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cancer	18840272	CNVD
Breast cancer	19602461	CNVD
Osteosarcoma	19286668	CNVD
Prostate cancer	19242612	CNVD
Prostate cancer	19258508	CNVD
small cell lung cancer	20016488	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Gastric adenocarcinoma	19115996	CNVD
Colorectal cancer	19455253	CNVD
Melanoma	20688739	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Renal cell carcinoma	21215367	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:189 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20721600-20722000	Enhancers	Rectal Mucosa Donor 29	rectum
2	chr8:20721600-20722000	Enhancers	Rectal Mucosa Donor 31	rectum
3	chr8:20721800-20722000	Enhancers	Sigmoid Colon	Sigmoid Colon
4	chr8:20723000-20724800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr8:20723200-20725000	Enhancers	NH-A	brain
6	chr8:20723200-20725800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr8:20723400-20724600	Enhancers	HSMM	muscle
8	chr8:20723400-20724800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:20723400-20724800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:20723600-20724200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr8:20723600-20724800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:20723800-20724600	Enhancers	HSMMtube	muscle
13	chr8:20723800-20725400	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr8:20724000-20724200	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr8:20724000-20724600	Enhancers	Brain Anterior Caudate	brain
16	chr8:20724000-20725200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
17	chr8:20724000-20725200	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr8:20724000-20725400	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr8:20724200-20724600	Enhancers	H1 Cell Line	embryonic stem cell
20	chr8:20724200-20724600	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr8:20724200-20724800	Enhancers	Spleen	Spleen
22	chr8:20724200-20725400	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr8:20724200-20725400	Enhancers	H9 Cell Line	embryonic stem cell
24	chr8:20724200-20725600	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr8:20724400-20724800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr8:20724400-20725000	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr8:20724400-20725200	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr8:20724400-20725400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr8:20724600-20725400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr8:20736600-20737000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
31	chr8:20736600-20737600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
32	chr8:20737400-20737600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr8:20737600-20739000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr8:20738400-20739400	Enhancers	Brain Germinal Matrix	brain
35	chr8:20738600-20739800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr8:20738600-20740000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr8:20738600-20740000	Enhancers	Rectal Mucosa Donor 29	rectum
38	chr8:20738600-20740000	Enhancers	Rectal Mucosa Donor 31	rectum
39	chr8:20738800-20739600	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr8:20738800-20739600	Enhancers	Fetal Intestine Large	intestine
41	chr8:20738800-20739800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr8:20738800-20739800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
43	chr8:20739000-20739600	Enhancers	iPS-18 Cell Line	embryonic stem cell
44	chr8:20739000-20739800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr8:20739200-20739400	Enhancers	Sigmoid Colon	Sigmoid Colon
46	chr8:20739200-20739600	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr8:20739200-20739800	Enhancers	Adipose Nuclei	Adipose
48	chr8:20739400-20739800	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr8:20739400-20739800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr8:20739400-20739800	Enhancers	Fetal Brain Male	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links