Variant report

Variant	nsv890855
Chromosome Location	chr8:50109365-50252962
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:984)
CpG islands
(count:122)
Chromatin interactive
region (count:55)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:984 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:50137796-50138000	K562	blood:	n/a	n/a
2	ARID3A	chr8:50189742-50189896	K562	blood:	n/a	n/a
3	ARID3A	chr8:50176389-50176820	K562	blood:	n/a	n/a
4	ARID3A	chr8:50142928-50143249	K562	blood:	n/a	n/a
5	ARID3A	chr8:50142326-50142343	K562	blood:	n/a	n/a
6	ARID3A	chr8:50139129-50140149	K562	blood:	n/a	n/a
7	ARID3A	chr8:50163861-50164727	K562	blood:	n/a	n/a
8	ATF1	chr8:50176434-50176846	K562	blood:	n/a	n/a
9	ATF1	chr8:50141709-50141977	K562	blood:	n/a	n/a
10	ATF1	chr8:50204080-50204452	K562	blood:	n/a	n/a
11	ATF1	chr8:50129384-50129937	K562	blood:	n/a	n/a
12	ATF1	chr8:50139582-50140080	K562	blood:	n/a	n/a
13	ATF1	chr8:50212341-50212528	K562	blood:	n/a	n/a
14	ATF1	chr8:50213509-50213949	K562	blood:	n/a	n/a
15	ATF1	chr8:50164658-50164824	K562	blood:	n/a	n/a
16	ATF1	chr8:50119038-50119092	K562	blood:	n/a	n/a
17	ATF1	chr8:50146602-50146783	K562	blood:	n/a	n/a
18	ATF2	chr8:50164138-50164888	GM12878	blood:	n/a	n/a
19	ATF2	chr8:50211599-50211898	GM12878	blood:	n/a	n/a
20	ATF2	chr8:50135514-50136034	GM12878	blood:	n/a	n/a
21	ATF2	chr8:50135529-50136160	GM12878	blood:	n/a	n/a
22	ATF2	chr8:50164032-50164513	GM12878	blood:	n/a	n/a
23	BATF	chr8:50135732-50136065	GM12878	blood:	n/a	n/a
24	BATF	chr8:50211556-50211991	GM12878	blood:	n/a	chr8:50211805-50211816
25	BATF	chr8:50135514-50135715	GM12878	blood:	n/a	n/a
26	BATF	chr8:50209651-50209963	GM12878	blood:	n/a	chr8:50209768-50209779
27	BATF	chr8:50164094-50164475	GM12878	blood:	n/a	n/a
28	BATF	chr8:50211604-50211957	GM12878	blood:	n/a	chr8:50211805-50211816
29	BCL11A	chr8:50211578-50211928	GM12878	blood:	n/a	n/a
30	BCL11A	chr8:50211125-50211392	GM12878	blood:	n/a	n/a
31	BCL11A	chr8:50164098-50164508	GM12878	blood:	n/a	n/a
32	BCL11A	chr8:50164150-50164454	GM12878	blood:	n/a	n/a
33	BCL3	chr8:50135822-50136123	GM12878	blood:	n/a	chr8:50136037-50136046
34	BHLHE40	chr8:50176554-50176751	K562	blood:	n/a	n/a
35	BHLHE40	chr8:50132977-50133185	K562	blood:	n/a	n/a
36	BHLHE40	chr8:50194998-50195115	GM12878	blood:	n/a	n/a
37	BHLHE40	chr8:50164195-50164479	GM12878	blood:	n/a	n/a
38	BHLHE40	chr8:50137743-50137843	K562	blood:	n/a	n/a
39	BHLHE40	chr8:50180418-50180607	GM12878	blood:	n/a	n/a
40	BHLHE40	chr8:50135477-50136071	GM12878	blood:	n/a	n/a
41	BHLHE40	chr8:50209877-50209893	GM12878	blood:	n/a	n/a
42	CBX3	chr8:50139600-50140088	K562	blood:	n/a	n/a
43	CBX3	chr8:50159951-50160302	K562	blood:	n/a	n/a
44	CBX3	chr8:50132885-50133210	K562	blood:	n/a	n/a
45	CCNT2	chr8:50213669-50213869	K562	blood:	n/a	n/a
46	CCNT2	chr8:50139758-50140073	K562	blood:	n/a	n/a
47	CCNT2	chr8:50159846-50160604	K562	blood:	n/a	n/a
48	CCNT2	chr8:50189670-50189756	K562	blood:	n/a	n/a
49	CEBPB	chr8:50238971-50239225	A549	lung:	n/a	chr8:50239036-50239049 chr8:50239036-50239047 chr8:50239038-50239047 chr8:50239036-50239049 chr8:50239037-50239048
50	CEBPB	chr8:50159113-50159141	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:50213812-50213862	NT2-D1	testis:	n/a
2	chr8:50213812-50213862	HCPEpiC	choroid plexus:	n/a
3	chr8:50213812-50213862	H1-hESC	embryonic stem cell:	embryo
4	chr8:50213812-50213862	AG10803	skin:	n/a
5	chr8:50213812-50213862	AG09309	skin:	n/a
6	chr8:50213812-50213862	HCM	heart:	n/a
7	chr8:50213812-50213862	U87	brain:	n/a
8	chr8:50220067-50220117	HepG2	liver:	n/a
9	chr8:50220067-50220117	ECC-1	luminal epithelium:	n/a
10	chr8:50213812-50213862	HCF	heart:	n/a
11	chr8:50213812-50213862	HEEpiC	esophagus:	n/a
12	chr8:50213812-50213862	LNCaP	prostate:	n/a
13	chr8:50213812-50213862	CMK	blood:	n/a
14	chr8:50213812-50213862	Hepatocyte	liver:	n/a
15	chr8:50213812-50213862	AG09319	gingival:	n/a
16	chr8:50213812-50213862	AG04449	skin:	fetal
17	chr8:50220067-50220117	NHBE	bronchial:	n/a
18	chr8:50220067-50220117	IMR90	lung:	fetal
19	chr8:50220067-50220117	AG10803	skin:	n/a
20	chr8:50220067-50220117	AG09309	skin:	n/a
21	chr8:50220067-50220117	NB4	blood:	n/a
22	chr8:50220067-50220117	NH-A	brain:	n/a
23	chr8:50213812-50213862	GM12891	blood:	n/a
24	chr8:50220067-50220117	CMK	blood:	n/a
25	chr8:50220067-50220117	SK-N-SH	brain:	n/a
26	chr8:50213812-50213862	RPTEC	kidney:	n/a
27	chr8:50220067-50220117	T-47D	breast:	n/a
28	chr8:50220067-50220117	H1-hESC	embryonic stem cell:	embryo
29	chr8:50213812-50213862	SKMC	muscle:	n/a
30	chr8:50220067-50220117	LNCaP	prostate:	n/a
31	chr8:50220067-50220117	BE2_C	brain:	n/a
32	chr8:50213812-50213862	NB4	blood:	n/a
33	chr8:50213812-50213862	GM12878	blood:	n/a
34	chr8:50220067-50220117	K562	blood:	n/a
35	chr8:50213812-50213862	Caco-2	colon:	n/a
36	chr8:50220067-50220117	NT2-D1	testis:	n/a
37	chr8:50213812-50213862	HRPEpiC	eye:	n/a
38	chr8:50213812-50213862	HCT-116	colon:	n/a
39	chr8:50220067-50220117	AG04450	lung:	fetal
40	chr8:50213812-50213862	HAEpiC	amniotic membrane:	n/a
41	chr8:50213812-50213862	K562	blood:	n/a
42	chr8:50220067-50220117	HRCEpiC	kidney:	n/a
43	chr8:50213812-50213862	PFSK-1	brain:	n/a
44	chr8:50220067-50220117	HAEpiC	amniotic membrane:	n/a
45	chr8:50220067-50220117	HCF	heart:	n/a
46	chr8:50220067-50220117	Hepatocyte	liver:	n/a
47	chr8:50220067-50220117	SKMC	muscle:	n/a
48	chr8:50213812-50213862	HRCEpiC	kidney:	n/a
49	chr8:50213812-50213862	A549	lung:	n/a
50	chr8:50220067-50220117	HEEpiC	esophagus:	n/a

(count:55 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr8:50157596..50161511-chr8:50162518..50165588,4	K562	blood:
2	chr8:50174406..50177036-chr8:50205443..50207064,2	K562	blood:
3	chr8:50152755..50154447-chr8:50156418..50158497,2	K562	blood:
4	chr8:50219874..50222720-chr8:50223488..50225514,3	K562	blood:
5	chr8:50223069..50226256-chr8:50227030..50231187,6	K562	blood:
6	chr8:50220131..50222425-chr8:50223280..50225514,2	K562	blood:
7	chr8:50224322..50226256-chr8:50228266..50231187,2	K562	blood:
8	chr8:50157489..50159096-chr8:50164088..50165590,2	K562	blood:
9	chr8:49891275..49892295-chr8:50142649..50143406,4	K562	blood:
10	chr8:50154056..50156142-chr8:50160235..50163146,3	K562	blood:
11	chr8:50201423..50204477-chr8:50211622..50215340,4	K562	blood:
12	chr8:50187361..50189118-chr8:50190967..50193350,2	K562	blood:
13	chr8:50157596..50161511-chr8:50162518..50165588,4	K562	blood:
14	chr8:50158291..50160893-chr8:50161385..50163707,3	K562	blood:
15	chr8:50224322..50226256-chr8:50228266..50231187,2	K562	blood:
16	chr8:50154600..50156142-chr8:50160235..50163146,2	K562	blood:
17	chr8:50152755..50154447-chr8:50156418..50158497,2	K562	blood:
18	chr8:50189228..50191927-chr8:50203055..50205664,2	K562	blood:
19	chr8:50151168..50153815-chr8:50156389..50158131,2	K562	blood:
20	chr8:50201423..50204477-chr8:50211622..50215340,4	K562	blood:
21	chr8:49959412..49962230-chr8:50108460..50111062,2	K562	blood:
22	chr8:50122009..50123670-chr8:50128301..50129864,2	K562	blood:
23	chr8:50220433..50222102-chr8:50312150..50314977,2	K562	blood:
24	chr8:50142308..50144662-chr8:50148420..50150993,2	K562	blood:
25	chr8:50198141..50200837-chr8:50202344..50203937,2	K562	blood:
26	chr8:50114787..50117721-chr8:50120524..50123676,3	K562	blood:
27	chr8:50142308..50144662-chr8:50148420..50150993,2	K562	blood:
28	chr8:50122009..50123670-chr8:50128301..50129864,2	K562	blood:
29	chr8:50142308..50144994-chr8:50148031..50149920,2	K562	blood:
30	chr8:50158291..50160893-chr8:50161385..50163707,3	K562	blood:
31	chr8:50157489..50159096-chr8:50164088..50165590,2	K562	blood:
32	chr8:50154600..50156142-chr8:50160235..50163146,2	K562	blood:
33	chr8:50219874..50222720-chr8:50223488..50225514,3	K562	blood:
34	chr8:50130806..50133714-chr8:50138525..50141483,2	K562	blood:
35	chr8:50220131..50222425-chr8:50223280..50225514,2	K562	blood:
36	chr8:50169460..50172760-chr8:50198302..50201832,3	K562	blood:
37	chr8:50169460..50172760-chr8:50198302..50201832,3	K562	blood:
38	chr8:50141654..50144587-chr8:50158970..50161464,2	K562	blood:
39	chr8:50130806..50133714-chr8:50138525..50141483,2	K562	blood:
40	chr8:50141654..50144587-chr8:50158970..50161464,2	K562	blood:
41	chr8:50201423..50203830-chr8:50212097..50214084,2	K562	blood:
42	chr8:50187361..50189118-chr8:50190967..50193350,2	K562	blood:
43	chr8:50189228..50191927-chr8:50203055..50205664,2	K562	blood:
44	chr8:50154056..50156142-chr8:50160235..50163146,3	K562	blood:
45	chr8:50223069..50226256-chr8:50227030..50231187,6	K562	blood:
46	chr8:50114787..50117721-chr8:50120524..50123676,3	K562	blood:
47	chr8:50174406..50177036-chr8:50205443..50207064,2	K562	blood:
48	chr8:50201423..50203830-chr8:50212097..50214084,2	K562	blood:
49	chr8:50207112..50210089-chr8:50216692..50218806,2	K562	blood:
50	chr8:49890957..49892066-chr8:50142626..50143516,6	MCF-7	breast:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C8orf22-2	chr8:50137497-50137609	XLOC_006794
2	lnc-C8orf22-2	chr8:50118940-50119026	NONHSAT126506
3	lnc-C8orf22-2	chr8:50137497-50137609	XLOC_006794
4	lnc-C8orf22-2	chr8:50137497-50137609	ENSG00000253474
5	lnc-C8orf22-2	chr8:50140699-50140779	XLOC_006794
6	lnc-C8orf22-2	chr8:50137500-50137588	ENSG00000253474
7	lnc-C8orf22-12	chr8:50243331-50243643	l_3592_chr8:50243194-50268365_ovary
8	lnc-C8orf22-2	chr8:50140698-50140779	NONHSAT126506
9	lnc-C8orf22-2	chr8:50140699-50140944	XLOC_006794
10	lnc-C8orf22-12	chr8:50243195-50243330	l_3592_chr8:50243194-50268365_ovary
11	lnc-C8orf22-2	chr8:50140699-50140779	ENSG00000253474
12	lnc-C8orf22-2	chr8:50141117-50141484	ENSG00000253474
13	lnc-C8orf22-2	chr8:50141117-50142346	XLOC_006794
14	lnc-C8orf22-2	chr8:50141116-50142388	NONHSAT126506
15	lnc-C8orf22-10	chr8:50242769-50243106	NONHSAT126514
16	lnc-RP11-738G5.2.1-6	chr8:50209735-50210341	ucscGeneNc_uc003xqr_2
17	lnc-C8orf22-12	chr8:50243796-50243921	l_3592_chr8:50243194-50268365_ovary
18	lnc-C8orf22-2	chr8:50137496-50137609	NONHSAT126506

No data

Variant related genes	Relation type
RN7SKP294	TF binding region
RN7SKP294	CpG island

Extended variants
information (count: 3497 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:3497 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12549733	chr8:50109365-50109366	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs375767844	chr8:50109366-50109367	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs56368009	chr8:50109448-50109449	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs116521750	chr8:50109515-50109516	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs554025193	chr8:50109554-50109555	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs6992674	chr8:50109555-50109556	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs7007122	chr8:50109559-50109560	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs7007136	chr8:50109589-50109590	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs77310251	chr8:50109622-50109623	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs547580159	chr8:50109632-50109633	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs6988643	chr8:50109638-50109639	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs539144525	chr8:50109687-50109688	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs117552188	chr8:50109690-50109691	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs184474390	chr8:50109750-50109751	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs137974617	chr8:50109769-50109770	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs537080411	chr8:50109791-50109792	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571964519	chr8:50109802-50109803	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs143543867	chr8:50109821-50109822	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs574282112	chr8:50109837-50109838	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs144019632	chr8:50109867-50109868	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs553599849	chr8:50109951-50109952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs578234775	chr8:50109980-50109981	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs2127682	chr8:50109981-50109982	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs76361231	chr8:50109982-50109983	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs1026802	chr8:50109984-50109985	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs148674094	chr8:50109987-50109988	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs139414900	chr8:50111046-50111047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs557076846	chr8:50111051-50111052	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs2046075	chr8:50111053-50111054	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs183015206	chr8:50111143-50111144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs12550543	chr8:50111144-50111145	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs12548013	chr8:50111159-50111160	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs544945428	chr8:50111206-50111207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs563486400	chr8:50111210-50111211	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs530650090	chr8:50111215-50111216	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs549039002	chr8:50111227-50111228	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs144181672	chr8:50111248-50111249	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs146551440	chr8:50111251-50111252	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs546621831	chr8:50111266-50111267	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs141283753	chr8:50111293-50111294	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs530159037	chr8:50111328-50111329	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs539329346	chr8:50111331-50111332	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs117991676	chr8:50111350-50111351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs569410295	chr8:50111364-50111365	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs149807550	chr8:50111372-50111373	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs12550595	chr8:50111373-50111374	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs16905547	chr8:50111393-50111394	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs145808002	chr8:50111415-50111416	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs4307358	chr8:50111458-50111459	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs569556751	chr8:50111475-50111476	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Lung cancer	18438408	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Melanoma	17363583	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Sezary syndrome	18413736	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	22522925	CNVD
Chordoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:229 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50109000-50109600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr8:50109000-50109600	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr8:50109400-50109800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr8:50109400-50109800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr8:50109400-50110000	Enhancers	K562	blood
6	chr8:50111000-50111600	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr8:50118200-50118400	Enhancers	Pancreas	Pancrea
8	chr8:50118200-50118600	Enhancers	GM12878-XiMat	blood
9	chr8:50118400-50119400	Enhancers	Stomach Mucosa	stomach
10	chr8:50118400-50122200	Weak transcription	Pancreas	Pancrea
11	chr8:50119400-50122200	Weak transcription	Stomach Mucosa	stomach
12	chr8:50120600-50121400	Enhancers	K562	blood
13	chr8:50121400-50124800	Weak transcription	K562	blood
14	chr8:50122200-50122600	ZNF genes & repeats	Pancreas	Pancrea
15	chr8:50122200-50123200	Enhancers	Stomach Mucosa	stomach
16	chr8:50122400-50123200	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr8:50122400-50123800	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr8:50122800-50123600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr8:50123000-50123600	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr8:50123000-50123600	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr8:50123200-50128800	Weak transcription	Stomach Mucosa	stomach
22	chr8:50123200-50129600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr8:50123800-50124800	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr8:50124800-50125000	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chr8:50124800-50125200	Enhancers	K562	blood
26	chr8:50125200-50131800	Weak transcription	K562	blood
27	chr8:50128800-50129800	Enhancers	Stomach Mucosa	stomach
28	chr8:50129600-50130000	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr8:50129800-50131800	Weak transcription	Stomach Mucosa	stomach
30	chr8:50131800-50132400	Enhancers	Stomach Mucosa	stomach
31	chr8:50131800-50133800	Enhancers	K562	blood
32	chr8:50132400-50141000	Weak transcription	Stomach Mucosa	stomach
33	chr8:50132600-50132800	Enhancers	Pancreatic Islets	Pancreatic Islet
34	chr8:50133800-50137400	Weak transcription	K562	blood
35	chr8:50137400-50138000	Enhancers	K562	blood
36	chr8:50138000-50139000	Weak transcription	K562	blood
37	chr8:50139000-50139200	Enhancers	Primary hematopoietic stem cells short term culture	blood
38	chr8:50139000-50139600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr8:50139000-50140000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr8:50139000-50140000	Enhancers	K562	blood
41	chr8:50139200-50159400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
42	chr8:50139400-50140200	Enhancers	Dnd41	blood
43	chr8:50139600-50140000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr8:50140000-50140200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr8:50140000-50141000	Weak transcription	K562	blood
46	chr8:50140000-50145000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr8:50141000-50143600	Enhancers	Stomach Mucosa	stomach
48	chr8:50141000-50143800	Enhancers	K562	blood
49	chr8:50142800-50143600	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr8:50143200-50143800	Enhancers	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links