Variant report

Variant	nsv890903
Chromosome Location	chr8:53342616-53528204
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1837)
CpG islands
(count:1894)
Chromatin interactive
region (count:32)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1837 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:53490305-53490673	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:53379534-53379715	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:53490268-53490616	K562	blood:	n/a	n/a
4	ATF1	chr8:53359120-53359225	K562	blood:	n/a	n/a
5	ATF2	chr8:53502312-53502692	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr8:53380751-53380920	K562	blood:	n/a	n/a
7	BACH1	chr8:53476807-53478567	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr8:53512316-53512639	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr8:53502214-53502830	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr8:53474425-53474625	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL11A	chr8:53502345-53502607	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCLAF1	chr8:53408672-53409049	GM12878	blood:	n/a	n/a
13	BHLHE40	chr8:53379663-53380117	HepG2	liver:	n/a	n/a
14	BHLHE40	chr8:53408743-53409081	GM12878	blood:	n/a	n/a
15	BHLHE40	chr8:53408740-53408939	K562	blood:	n/a	n/a
16	BHLHE40	chr8:53379829-53380010	K562	blood:	n/a	n/a
17	BHLHE40	chr8:53490163-53490169	K562	blood:	n/a	n/a
18	BHLHE40	chr8:53381891-53381969	HepG2	liver:	n/a	n/a
19	BRCA1	chr8:53372746-53373386	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr8:53396527-53396846	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr8:53379588-53380167	Hela-S3	cervix:	n/a	chr8:53380042-53380051
22	BRCA1	chr8:53378991-53379357	Hela-S3	cervix:	n/a	n/a
23	BRCA1	chr8:53518795-53518796	Hela-S3	cervix:	n/a	n/a
24	CBX3	chr8:53515260-53515489	K562	blood:	n/a	n/a
25	CBX3	chr8:53379508-53380052	HCT-116	colon:	n/a	n/a
26	CBX3	chr8:53459232-53459585	K562	blood:	n/a	n/a
27	CCNT2	chr8:53436081-53436281	K562	blood:	n/a	n/a
28	CEBPB	chr8:53522141-53522410	HepG2	liver:	n/a	chr8:53522283-53522294
29	CEBPB	chr8:53484150-53484340	HepG2	liver:	n/a	chr8:53484205-53484216
30	CEBPB	chr8:53383876-53384104	HepG2	liver:	n/a	chr8:53384002-53384013
31	CEBPB	chr8:53345345-53345411	K562	blood:	n/a	chr8:53345360-53345371
32	CEBPB	chr8:53363290-53363497	HepG2	liver:	n/a	chr8:53363360-53363371
33	CEBPB	chr8:53381863-53382286	MCF-7	breast:	n/a	n/a
34	CEBPB	chr8:53380669-53381024	HepG2	liver:	n/a	chr8:53380846-53380857 chr8:53380675-53380688
35	CEBPB	chr8:53390956-53391156	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr8:53379594-53379970	ECC-1	luminal epithelium:	n/a	n/a
37	CEBPB	chr8:53390896-53391184	K562	blood:	n/a	n/a
38	CEBPB	chr8:53390859-53391231	A549	lung:	n/a	n/a
39	CEBPB	chr8:53500301-53500400	K562	blood:	n/a	n/a
40	CEBPB	chr8:53390857-53391216	IMR90	lung:	n/a	n/a
41	CEBPB	chr8:53500260-53500488	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr8:53504508-53504688	HepG2	liver:	n/a	chr8:53504612-53504623
43	CEBPB	chr8:53383928-53384094	A549	lung:	n/a	chr8:53384002-53384013
44	CEBPB	chr8:53372293-53373280	Hela-S3	cervix:	n/a	n/a
45	CEBPB	chr8:53482192-53482440	A549	lung:	n/a	chr8:53482355-53482366
46	CEBPB	chr8:53509866-53509885	HepG2	liver:	n/a	n/a
47	CEBPB	chr8:53505840-53506040	HepG2	liver:	n/a	n/a
48	CEBPB	chr8:53396531-53396797	K562	blood:	n/a	chr8:53396637-53396650
49	CEBPB	chr8:53396457-53396894	A549	lung:	n/a	chr8:53396637-53396650
50	CEBPB	chr8:53366024-53366229	H1-hESC	embryonic stem cell:	n/a	n/a

(count:1894 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:53474887-53474937	HCT-116	colon:	n/a
2	chr8:53490251-53490301	ProgFib	skin:	n/a
3	chr8:53478102-53478152	HRE	kidney:	n/a
4	chr8:53474887-53474937	HCT-116	colon:	n/a
5	chr8:53490251-53490301	ProgFib	skin:	n/a
6	chr8:53478102-53478152	HRE	kidney:	n/a
7	chr8:53478023-53478073	HL-60	blood:	n/a
8	chr8:53397932-53397982	CMK	blood:	n/a
9	chr8:53450729-53450779	AG10803	skin:	n/a
10	chr8:53478102-53478152	SK-N-SH	brain:	n/a
11	chr8:53397932-53397982	Caco-2	colon:	n/a
12	chr8:53361893-53361943	NB4	blood:	n/a
13	chr8:53477545-53477595	HIPEpiC	eye:	n/a
14	chr8:53485704-53485754	PANC-1	pancreas:	n/a
15	chr8:53508979-53509029	AoSMC	blood vessel:	n/a
16	chr8:53452398-53452448	NB4	blood:	n/a
17	chr8:53478074-53478124	SK-N-SH_RA	brain:	n/a
18	chr8:53478023-53478073	AG04450	lung:	fetal
19	chr8:53352275-53352325	AG09309	skin:	n/a
20	chr8:53471884-53471934	U87	brain:	n/a
21	chr8:53478074-53478124	HNPCEpiC	eye:	n/a
22	chr8:53477545-53477595	U87	brain:	n/a
23	chr8:53352275-53352325	AG04450	lung:	fetal
24	chr8:53352275-53352325	HRE	kidney:	n/a
25	chr8:53478074-53478124	SAEC	small airway:	n/a
26	chr8:53499582-53499632	HRCEpiC	kidney:	n/a
27	chr8:53485704-53485754	ECC-1	luminal epithelium:	n/a
28	chr8:53397932-53397982	ovcar-3	ovarian:	n/a
29	chr8:53456003-53456053	PrEC	prostate:	n/a
30	chr8:53478102-53478152	K562	blood:	n/a
31	chr8:53478706-53478756	HepG2	liver:	n/a
32	chr8:53499558-53499608	MCF-7	breast:	n/a
33	chr8:53478023-53478073	HPAEpiC	pulmonary alveolar:	n/a
34	chr8:53478706-53478756	Hela-S3	cervix:	n/a
35	chr8:53485704-53485754	GM06990	blood:	n/a
36	chr8:53452398-53452448	AG10803	skin:	n/a
37	chr8:53476865-53476915	HRPEpiC	eye:	n/a
38	chr8:53474887-53474937	AG09309	skin:	n/a
39	chr8:53490251-53490301	SK-N-MC	brain:	n/a
40	chr8:53477264-53477314	AG09319	gingival:	n/a
41	chr8:53490251-53490301	Hela-S3	cervix:	n/a
42	chr8:53474887-53474937	RPTEC	kidney:	n/a
43	chr8:53476865-53476915	SK-N-SH	brain:	n/a
44	chr8:53478102-53478152	AG04449	skin:	fetal
45	chr8:53361893-53361943	ECC-1	luminal epithelium:	n/a
46	chr8:53452398-53452448	SK-N-SH_RA	brain:	n/a
47	chr8:53392286-53392336	LNCaP	prostate:	n/a
48	chr8:53478023-53478073	ECC-1	luminal epithelium:	n/a
49	chr8:53478053-53478103	HUVEC	blood vessel:	n/a
50	chr8:53474887-53474937	AG04450	lung:	fetal

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:53024718..53025840-chr8:53408415..53409142,5	K562	blood:
2	chr8:53522102..53525092-chr8:53526837..53528370,2	K562	blood:
3	chr8:53396327..53397778-chr8:53408319..53409731,6	MCF-7	breast:
4	chr8:52810955..52812797-chr8:53371753..53374505,2	MCF-7	breast:
5	chr8:53408834..53411625-chr8:53415197..53417909,2	MCF-7	breast:
6	chr8:53333127..53333987-chr8:53403629..53404249,2	MCF-7	breast:
7	chr8:53354328..53356957-chr8:53358190..53360419,2	MCF-7	breast:
8	chr8:53396327..53397778-chr8:53408319..53409731,6	MCF-7	breast:
9	chr8:53384050..53386139-chr8:53390786..53392939,2	MCF-7	breast:
10	chr8:53384050..53386139-chr8:53390786..53392939,2	MCF-7	breast:
11	chr8:53333225..53333725-chr8:53388714..53389585,2	MCF-7	breast:
12	chr8:53377547..53380484-chr8:53382020..53384595,2	MCF-7	breast:
13	chr8:53333238..53334019-chr8:53408621..53409292,5	MCF-7	breast:
14	chr8:53395676..53397810-chr8:53399596..53402225,2	MCF-7	breast:
15	chr8:53490108..53490739-chr8:53649694..53650429,2	MCF-7	breast:
16	chr8:53333510..53334034-chr8:53408804..53409370,2	K562	blood:
17	chr8:53408834..53411625-chr8:53415197..53417909,2	MCF-7	breast:
18	chr8:53379300..53382260-chr8:53389036..53391579,2	MCF-7	breast:
19	chr8:53527520..53529626-chr8:53537141..53539075,2	MCF-7	breast:
20	chr8:53372593..53375156-chr8:53377269..53381843,6	MCF-7	breast:
21	chr8:53379006..53383439-chr8:53384188..53388259,4	MCF-7	breast:
22	chr8:53372582..53373541-chr9:86594741..86595608,2	Hela-S3	cervix:
23	chr8:53490029..53490926-chr8:53861444..53862393,2	MCF-7	breast:
24	chr8:53379006..53383439-chr8:53384188..53388259,4	MCF-7	breast:
25	chr8:53333125..53334025-chr8:53408456..53409345,8	MCF-7	breast:
26	chr8:53527707..53530232-chr8:53540269..53542754,2	K562	blood:
27	chr8:53377547..53380484-chr8:53382020..53384595,2	MCF-7	breast:
28	chr8:53395676..53397810-chr8:53399596..53402225,2	MCF-7	breast:
29	chr8:53354328..53356957-chr8:53358190..53360419,2	MCF-7	breast:
30	chr8:53379300..53382260-chr8:53389036..53391579,2	MCF-7	breast:
31	chr8:53522102..53525092-chr8:53526837..53528370,2	K562	blood:
32	chr8:53527061..53528646-chr8:53530160..53531706,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PCMTD1-4	chr8:53373445-53373519	NONHSAT126569

No data

Variant related genes	Relation type
ST18	TF binding region
FAM150A	TF binding region
ST18	CpG island
FAM150A	CpG island
ENSG00000165119	chromatin interactions
ENSG00000147488	chromatin interactions
ENSG00000168300	chromatin interactions
ENSG00000228801	chromatin interactions

Extended variants
information (count: 4804 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:4804 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1001932	chr8:53342616-53342617	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs16917839	chr8:53342686-53342687	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs74837364	chr8:53342707-53342708	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs570482038	chr8:53342709-53342710	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs139107158	chr8:53342728-53342729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs555853499	chr8:53342741-53342742	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs117829452	chr8:53342742-53342743	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs80245603	chr8:53342745-53342746	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs192261524	chr8:53342765-53342766	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs185275336	chr8:53342809-53342810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs117473878	chr8:53342821-53342822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs190394995	chr8:53342840-53342841	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs142533305	chr8:53342958-53342959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs284810	chr8:53343063-53343064	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs112866191	chr8:53343064-53343065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs375833793	chr8:53343067-53343068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs530118110	chr8:53343084-53343085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs113793782	chr8:53343110-53343111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs184405664	chr8:53343124-53343125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs552139283	chr8:53343207-53343208	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs527463999	chr8:53343211-53343212	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs147829159	chr8:53343212-53343213	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs188172113	chr8:53343217-53343218	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs111322258	chr8:53343238-53343239	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs549852625	chr8:53343259-53343260	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs567922610	chr8:53343268-53343269	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs1837634	chr8:53343285-53343286	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs555298075	chr8:53343293-53343294	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs180779144	chr8:53343415-53343416	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs534373606	chr8:53343434-53343435	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs185828267	chr8:53343471-53343472	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs149137169	chr8:53343488-53343489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs537903972	chr8:53343548-53343549	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs556660458	chr8:53343604-53343605	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs574490790	chr8:53343607-53343608	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs188629604	chr8:53343630-53343631	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs541852931	chr8:53343637-53343638	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs575973862	chr8:53343741-53343742	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs560002224	chr8:53343743-53343744	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs538559091	chr8:53343744-53343745	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs113218773	chr8:53343747-53343748	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs111753105	chr8:53343751-53343752	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs554820537	chr8:53343779-53343780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs35147803	chr8:53343814-53343815	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs79811833	chr8:53343827-53343828	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs564080970	chr8:53343841-53343842	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs181891660	chr8:53343845-53343846	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs16917840	chr8:53343890-53343891	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs561867940	chr8:53343904-53343905	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs117136348	chr8:53343905-53343906	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Sezary syndrome	18413736	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Uveal melanoma	20484589	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:53340200-53343400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr8:53340400-53343200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:53341400-53342800	Enhancers	Brain Substantia Nigra	brain
4	chr8:53342000-53343200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr8:53343200-53343600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr8:53343200-53344600	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr8:53343400-53343800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:53344600-53351000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr8:53350800-53351000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:53351000-53351200	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr8:53351000-53351200	Enhancers	Gastric	stomach
12	chr8:53351000-53351600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr8:53351000-53351600	Enhancers	Fetal Kidney	kidney
14	chr8:53351000-53352400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr8:53351000-53352800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
16	chr8:53351200-53351400	Flanking Active TSS	Gastric	stomach
17	chr8:53351200-53351400	Enhancers	Pancreas	Pancrea
18	chr8:53351200-53351600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:53351200-53351600	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
20	chr8:53351200-53351800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr8:53351200-53352400	Enhancers	Spleen	Spleen
22	chr8:53351200-53352800	Enhancers	Esophagus	oesophagus
23	chr8:53351400-53351800	Active TSS	Gastric	stomach
24	chr8:53351400-53352000	ZNF genes & repeats	Pancreas	Pancrea
25	chr8:53351600-53351800	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr8:53351600-53351800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr8:53351600-53351800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr8:53351800-53352000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr8:53352000-53352200	Weak transcription	Pancreas	Pancrea
30	chr8:53352800-53360000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
31	chr8:53360000-53360400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
32	chr8:53360400-53371200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr8:53361200-53363800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr8:53361800-53362200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr8:53361800-53362400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr8:53361800-53362600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr8:53365600-53366400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr8:53366000-53366400	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr8:53366000-53366400	Enhancers	iPS-15b Cell Line	embryonic stem cell
40	chr8:53366000-53366400	Enhancers	iPS-20b Cell Line	embryonic stem cell
41	chr8:53366000-53366600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
42	chr8:53366000-53366800	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr8:53371200-53371600	Enhancers	Primary hematopoietic stem cells short term culture	blood
44	chr8:53371600-53371800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
45	chr8:53371600-53372000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr8:53371800-53372000	Active TSS	Primary hematopoietic stem cells short term culture	blood
47	chr8:53371800-53372800	Enhancers	Primary hematopoietic stem cells	blood
48	chr8:53372000-53372200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
49	chr8:53372000-53372400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr8:53372000-53374800	Enhancers	Hela-S3	cervix

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links