Variant report

Variant	nsv890912
Chromosome Location	chr8:53829203-53874753
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr8:53835080-53835117	K562	blood:	n/a	n/a
2	ATF1	chr8:53849646-53849868	K562	blood:	n/a	n/a
3	BACH1	chr8:53851100-53851301	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr8:53854127-53854469	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr8:53852611-53852810	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr8:53853083-53853227	H1-hESC	embryonic stem cell:	n/a	n/a
7	BHLHE40	chr8:53854274-53854336	GM12878	blood:	n/a	n/a
8	BRCA1	chr8:53853372-53853513	H1-hESC	embryonic stem cell:	n/a	n/a
9	BRCA1	chr8:53854213-53854414	HepG2	liver:	n/a	n/a
10	BRCA1	chr8:53854261-53854544	H1-hESC	embryonic stem cell:	n/a	n/a
11	CEBPB	chr8:53830968-53831268	HepG2	liver:	n/a	chr8:53831113-53831124
12	CEBPB	chr8:53850582-53850783	A549	lung:	n/a	n/a
13	CEBPB	chr8:53854282-53854519	H1-hESC	embryonic stem cell:	n/a	n/a
14	CEBPB	chr8:53850499-53850779	K562	blood:	n/a	n/a
15	CEBPB	chr8:53830972-53831278	IMR90	lung:	n/a	chr8:53831113-53831124
16	CEBPB	chr8:53830927-53831156	K562	blood:	n/a	chr8:53831113-53831124
17	CEBPB	chr8:53831668-53832176	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr8:53834940-53834973	A549	lung:	n/a	n/a
19	CHD1	chr8:53853898-53854325	H1-hESC	embryonic stem cell:	n/a	n/a
20	CHD1	chr8:53854213-53854389	GM12878	blood:	n/a	n/a
21	CHD1	chr8:53854039-53854723	IMR90	lung:	n/a	n/a
22	CHD2	chr8:53851260-53851279	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD2	chr8:53854284-53854530	H1-hESC	embryonic stem cell:	n/a	n/a
24	CHD2	chr8:53854239-53854481	HepG2	liver:	n/a	n/a
25	CHD2	chr8:53853125-53853738	H1-hESC	embryonic stem cell:	n/a	n/a
26	CREB1	chr8:53852360-53853460	H1-hESC	embryonic stem cell:	n/a	n/a
27	CREB1	chr8:53854182-53854464	A549	lung:	n/a	n/a
28	CREB1	chr8:53853639-53854000	A549	lung:	n/a	n/a
29	CTBP2	chr8:53851626-53854473	H1-hESC	embryonic stem cell:	n/a	n/a
30	CTCF	chr8:53836736-53836897	T-47D	breast:	n/a	n/a
31	CTCF	chr8:53853874-53853878	Spleen_OC	spleen:	n/a	n/a
32	CTCF	chr8:53854220-53854370	K562	blood:	n/a	chr8:53854334-53854347 chr8:53854327-53854348 chr8:53854332-53854350 chr8:53854338-53854347 chr8:53854333-53854349 chr8:53854335-53854345
33	CTCF	chr8:53853200-53853350	SAEC	small airway:	n/a	n/a
34	CTCF	chr8:53836724-53836887	SK-N-SH_RA	brain:	n/a	n/a
35	CTCF	chr8:53854260-53854410	SK-N-SH_RA	brain:	n/a	chr8:53854334-53854347 chr8:53854327-53854348 chr8:53854332-53854350 chr8:53854338-53854347 chr8:53854333-53854349 chr8:53854335-53854345
36	CTCF	chr8:53854280-53854430	GM12875	blood:	n/a	chr8:53854334-53854347 chr8:53854327-53854348 chr8:53854332-53854350 chr8:53854338-53854347 chr8:53854333-53854349 chr8:53854335-53854345
37	CTCF	chr8:53853820-53853970	GM12871	blood:	n/a	chr8:53853894-53853907
38	CTCF	chr8:53861840-53861990	HEEpiC	esophagus:	n/a	n/a
39	CTCF	chr8:53854260-53854410	AG04450	lung:	n/a	chr8:53854334-53854347 chr8:53854327-53854348 chr8:53854332-53854350 chr8:53854338-53854347 chr8:53854333-53854349 chr8:53854335-53854345
40	CTCF	chr8:53853667-53854074	H1-hESC	embryonic stem cell:	n/a	chr8:53853894-53853907
41	CTCF	chr8:53853080-53853230	HUVEC	blood vessel:	n/a	n/a
42	CTCF	chr8:53854840-53854990	BE2_C	brain:	n/a	n/a
43	CTCF	chr8:53836529-53836949	HCT-116	colon:	n/a	n/a
44	CTCF	chr8:53853734-53853929	HepG2	liver:	n/a	chr8:53853894-53853907
45	CTCF	chr8:53861921-53861956	MCF-7	breast:	n/a	n/a
46	CTCF	chr8:53836760-53836910	HA-sp	spinal cord:	n/a	n/a
47	CTCF	chr8:53853340-53853490	GM12873	blood:	n/a	n/a
48	CTCF	chr8:53861900-53862050	HEEpiC	esophagus:	n/a	n/a
49	CTCF	chr8:53854260-53854410	GM12875	blood:	n/a	chr8:53854334-53854347 chr8:53854327-53854348 chr8:53854332-53854350 chr8:53854338-53854347 chr8:53854333-53854349 chr8:53854335-53854345
50	CTCF	chr8:53853860-53854010	GM12866	blood:	n/a	chr8:53853894-53853907

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:53854425-53854475	GM12892	blood:	n/a
2	chr8:53851156-53851206	HRE	kidney:	n/a
3	chr8:53853659-53853709	GM12878	blood:	n/a
4	chr8:53853444-53853494	ECC-1	luminal epithelium:	n/a
5	chr8:53852101-53852151	HCF	heart:	n/a
6	chr8:53854425-53854475	GM12892	blood:	n/a
7	chr8:53851156-53851206	HRE	kidney:	n/a
8	chr8:53853659-53853709	GM12878	blood:	n/a
9	chr8:53853444-53853494	ECC-1	luminal epithelium:	n/a
10	chr8:53852101-53852151	HCF	heart:	n/a
11	chr8:53852030-53852080	HMEC	breast:	n/a
12	chr8:53853112-53853162	HEK293	kidney:	embryo
13	chr8:53851707-53851757	AG04449	skin:	fetal
14	chr8:53854495-53854545	PANC-1	pancreas:	n/a
15	chr8:53853444-53853494	HCT-116	colon:	n/a
16	chr8:53853604-53853654	HPAEpiC	pulmonary alveolar:	n/a
17	chr8:53853444-53853494	GM19239	blood:	n/a
18	chr8:53853659-53853709	U87	brain:	n/a
19	chr8:53852443-53852493	PANC-1	pancreas:	n/a
20	chr8:53849059-53849109	HCM	heart:	n/a
21	chr8:53854425-53854475	ProgFib	skin:	n/a
22	chr8:53852184-53852234	AG10803	skin:	n/a
23	chr8:53854172-53854222	AG09319	gingival:	n/a
24	chr8:53854425-53854475	GM06990	blood:	n/a
25	chr8:53854172-53854222	HCM	heart:	n/a
26	chr8:53866689-53866739	T-47D	breast:	n/a
27	chr8:53851156-53851206	SKMC	muscle:	n/a
28	chr8:53853604-53853654	ovcar-3	ovarian:	n/a
29	chr8:53853659-53853709	HAEpiC	amniotic membrane:	n/a
30	chr8:53852443-53852493	LNCaP	prostate:	n/a
31	chr8:53849059-53849109	PrEC	prostate:	n/a
32	chr8:53857047-53857097	MCF10A-Er-Src	breast:	n/a
33	chr8:53851156-53851206	T-47D	breast:	n/a
34	chr8:53852661-53852711	LNCaP	prostate:	n/a
35	chr8:53852184-53852234	HNPCEpiC	eye:	n/a
36	chr8:53849059-53849109	CMK	blood:	n/a
37	chr8:53852422-53852472	BJ	skin:	n/a
38	chr8:53852030-53852080	BE2_C	brain:	n/a
39	chr8:53852274-53852324	RPTEC	kidney:	n/a
40	chr8:53852661-53852711	RPTEC	kidney:	n/a
41	chr8:53853659-53853709	ProgFib	skin:	n/a
42	chr8:53857047-53857097	HUVEC	blood vessel:	n/a
43	chr8:53853444-53853494	ProgFib	skin:	n/a
44	chr8:53853659-53853709	RPTEC	kidney:	n/a
45	chr8:53853112-53853162	AG04450	lung:	fetal
46	chr8:53853444-53853494	HMEC	breast:	n/a
47	chr8:53852184-53852234	HRPEpiC	eye:	n/a
48	chr8:53853659-53853709	NB4	blood:	n/a
49	chr8:53853112-53853162	A549	lung:	n/a
50	chr8:53864533-53864583	HAEpiC	amniotic membrane:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:53649708..53650309-chr8:53861493..53862325,2	MCF-7	breast:
2	chr8:53649395..53650276-chr8:53853945..53854772,3	MCF-7	breast:
3	chr8:53711623..53712255-chr8:53854248..53854877,2	MCF-7	breast:
4	chr8:53824182..53826447-chr8:53833370..53835967,2	K562	blood:
5	chr8:53627445..53629464-chr8:53852538..53854621,2	MCF-7	breast:
6	chr8:53649723..53650709-chr8:53861922..53862952,3	MCF-7	breast:
7	chr8:53636506..53637243-chr8:53861404..53862378,2	MCF-7	breast:
8	chr8:53490029..53490926-chr8:53861444..53862393,2	MCF-7	breast:
9	chr8:53649371..53650945-chr8:53853868..53854778,6	MCF-7	breast:
10	chr8:53634696..53637064-chr8:53861267..53863053,2	MCF-7	breast:

Variant related genes	Relation type
NPBWR1	TF binding region
NPBWR1	CpG island
ENSG00000271555	chromatin interactions

Extended variants
information (count: 1215 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:1215 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3860850	chr8:53829203-53829204	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs539973657	chr8:53829234-53829235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs16918314	chr8:53829238-53829239	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs576946854	chr8:53829262-53829263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs544204412	chr8:53829288-53829289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs560610552	chr8:53829294-53829295	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs564017401	chr8:53829503-53829504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs116548180	chr8:53829504-53829505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs376464416	chr8:53829579-53829580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs561345759	chr8:53829663-53829664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs200755513	chr8:53829695-53829696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs142702626	chr8:53829716-53829717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs150975679	chr8:53829720-53829721	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs571693458	chr8:53829721-53829722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs572553594	chr8:53829725-53829726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs189555718	chr8:53829760-53829761	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs62507082	chr8:53829829-53829830	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs372240985	chr8:53829831-53829832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs568872890	chr8:53829843-53829844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs115481597	chr8:53829889-53829890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs554818377	chr8:53829949-53829950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566562068	chr8:53829990-53829991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs17341788	chr8:53830025-53830026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs558393896	chr8:53830094-53830095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs577009276	chr8:53830095-53830096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs552532607	chr8:53830137-53830138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs146013530	chr8:53830152-53830153	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs574438372	chr8:53830158-53830159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs568955763	chr8:53830164-53830165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376821442	chr8:53830214-53830215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs371574106	chr8:53830241-53830242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs550419752	chr8:53830245-53830246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs554684826	chr8:53830246-53830247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs565081001	chr8:53830249-53830250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs375212867	chr8:53830251-53830252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550616155	chr8:53830252-53830253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs180738907	chr8:53830253-53830254	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs572880228	chr8:53830256-53830257	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs186599426	chr8:53830262-53830263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs548218363	chr8:53830264-53830265	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs189388179	chr8:53830276-53830277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs533793146	chr8:53830277-53830278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs552340147	chr8:53830308-53830309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs2467178	chr8:53830315-53830316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs537941536	chr8:53830322-53830323	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs556261179	chr8:53830326-53830327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs181757846	chr8:53830331-53830332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs141690258	chr8:53830341-53830342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs555010352	chr8:53830350-53830351	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs573475315	chr8:53830352-53830353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Sezary syndrome	18413736	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Uveal melanoma	20484589	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:520 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:53825800-53831200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:53826000-53831000	Weak transcription	Hela-S3	cervix
3	chr8:53831000-53832400	Enhancers	Hela-S3	cervix
4	chr8:53831000-53832400	Enhancers	HSMMtube	muscle
5	chr8:53831200-53832000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:53831200-53832000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:53831200-53832200	Enhancers	HSMM	muscle
8	chr8:53831200-53832600	Enhancers	Liver	Liver
9	chr8:53831400-53831800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:53831600-53832200	Enhancers	Dnd41	blood
11	chr8:53832000-53836600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr8:53832200-53834600	Weak transcription	HSMM	muscle
13	chr8:53832400-53834800	Weak transcription	HSMMtube	muscle
14	chr8:53834600-53835000	Enhancers	HSMM	muscle
15	chr8:53834600-53836000	Enhancers	Muscle Satellite Cultured Cells	--
16	chr8:53834800-53835200	Bivalent Enhancer	A549	lung
17	chr8:53834800-53836000	Enhancers	HSMMtube	muscle
18	chr8:53835000-53835600	Flanking Active TSS	HSMM	muscle
19	chr8:53835600-53836200	Enhancers	HSMM	muscle
20	chr8:53836600-53836800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr8:53836600-53836800	Enhancers	Brain Germinal Matrix	brain
22	chr8:53850600-53850800	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
23	chr8:53850600-53851000	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
24	chr8:53850600-53851000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr8:53850600-53851000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr8:53850600-53851200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
27	chr8:53850600-53851400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
28	chr8:53850800-53851200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
29	chr8:53850800-53853400	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
30	chr8:53850800-53854400	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
31	chr8:53851000-53851200	Bivalent Enhancer	Primary T cells from cord blood	blood
32	chr8:53851000-53851200	Bivalent/Poised TSS	Primary hematopoietic stem cells	blood
33	chr8:53851000-53851200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
34	chr8:53851000-53851400	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
35	chr8:53851000-53851600	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
36	chr8:53851000-53851800	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
37	chr8:53851000-53851800	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
38	chr8:53851000-53852000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
39	chr8:53851000-53852200	Bivalent Enhancer	Brain Anterior Caudate	brain
40	chr8:53851000-53852200	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
41	chr8:53851000-53854400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr8:53851000-53854400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr8:53851000-53854600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
44	chr8:53851000-53854800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
45	chr8:53851200-53851400	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
46	chr8:53851200-53851400	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
47	chr8:53851200-53851400	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
48	chr8:53851200-53851400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
49	chr8:53851200-53851400	Bivalent/Poised TSS	Primary hematopoietic stem cells short term culture	blood
50	chr8:53851200-53851600	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links