Variant report

Variant	nsv890936
Chromosome Location	chr8:58266339-58564501
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1972)
CpG islands
(count:0)
Chromatin interactive
region (count:43)
LncRNA
region (count:46)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1972 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:58492647-58493411	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:58500894-58501389	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:58462919-58463233	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:58563216-58563484	HepG2	liver:	n/a	n/a
5	ARID3A	chr8:58476520-58477283	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:58333227-58333305	HepG2	liver:	n/a	n/a
7	ARID3A	chr8:58499788-58500142	HepG2	liver:	n/a	n/a
8	ATF2	chr8:58333169-58333805	GM12878	blood:	n/a	n/a
9	ATF2	chr8:58311265-58311625	GM12878	blood:	n/a	n/a
10	ATF2	chr8:58492953-58493463	GM12878	blood:	n/a	n/a
11	ATF2	chr8:58390674-58391022	GM12878	blood:	n/a	n/a
12	BACH1	chr8:58354912-58354914	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr8:58379190-58379193	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr8:58428447-58428496	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr8:58347415-58347430	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr8:58493059-58493347	GM12878	blood:	n/a	chr8:58493204-58493215
17	BATF	chr8:58375688-58376050	GM12878	blood:	n/a	n/a
18	BATF	chr8:58375749-58376012	GM12878	blood:	n/a	n/a
19	BATF	chr8:58333475-58333713	GM12878	blood:	n/a	n/a
20	BATF	chr8:58431541-58431841	GM12878	blood:	n/a	n/a
21	BATF	chr8:58324937-58325171	GM12878	blood:	n/a	chr8:58325045-58325056
22	BATF	chr8:58312870-58313274	GM12878	blood:	n/a	n/a
23	BATF	chr8:58312851-58313167	GM12878	blood:	n/a	n/a
24	BATF	chr8:58390691-58391025	GM12878	blood:	n/a	n/a
25	BATF	chr8:58360119-58360363	GM12878	blood:	n/a	n/a
26	BATF	chr8:58390640-58391020	GM12878	blood:	n/a	n/a
27	BATF	chr8:58311348-58311612	GM12878	blood:	n/a	n/a
28	BCL11A	chr8:58431714-58432065	GM12878	blood:	n/a	chr8:58431723-58431732
29	BCL11A	chr8:58510285-58510560	H1-hESC	embryonic stem cell:	n/a	n/a
30	BCL11A	chr8:58311346-58311586	GM12878	blood:	n/a	n/a
31	BCL3	chr8:58476576-58477390	A549	lung:	n/a	n/a
32	BCLAF1	chr8:58333114-58333732	GM12878	blood:	n/a	n/a
33	BCLAF1	chr8:58333055-58333814	GM12878	blood:	n/a	n/a
34	BHLHE40	chr8:58333190-58333753	GM12878	blood:	n/a	n/a
35	BHLHE40	chr8:58318082-58318291	K562	blood:	n/a	chr8:58318178-58318191 chr8:58318179-58318188
36	BHLHE40	chr8:58275265-58275569	GM12878	blood:	n/a	n/a
37	BHLHE40	chr8:58311401-58311683	GM12878	blood:	n/a	n/a
38	BHLHE40	chr8:58318058-58318372	GM12878	blood:	n/a	chr8:58318178-58318191 chr8:58318179-58318188
39	BHLHE40	chr8:58500849-58501230	HepG2	liver:	n/a	n/a
40	BHLHE40	chr8:58431585-58431909	GM12878	blood:	n/a	n/a
41	BRCA1	chr8:58560657-58560718	Hela-S3	cervix:	n/a	n/a
42	CBX3	chr8:58510249-58510452	K562	blood:	n/a	n/a
43	CBX3	chr8:58510232-58510480	HCT-116	colon:	n/a	n/a
44	CBX3	chr8:58283454-58283698	K562	blood:	n/a	n/a
45	CEBPB	chr8:58279939-58280290	HepG2	liver:	n/a	chr8:58280119-58280130
46	CEBPB	chr8:58365514-58365823	IMR90	lung:	n/a	chr8:58365647-58365658
47	CEBPB	chr8:58510291-58510461	MCF-7	breast:	n/a	n/a
48	CEBPB	chr8:58500276-58500614	HepG2	liver:	n/a	chr8:58500451-58500464
49	CEBPB	chr8:58368798-58369019	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr8:58500390-58500522	A549	lung:	n/a	chr8:58500451-58500464

No data

(count:43 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:58264759..58266862-chr8:58279202..58281751,2	K562	blood:
2	chr8:58512585..58515336-chr8:58516943..58518859,2	K562	blood:
3	chr8:58277427..58279120-chr8:58279651..58282018,2	K562	blood:
4	chr8:58334906..58335645-chr8:58403623..58404511,2	MCF-7	breast:
5	chr8:58332657..58333329-chr8:58487609..58488171,2	MCF-7	breast:
6	chr4:139291348..139291947-chr8:58507526..58508108,2	MCF-7	breast:
7	chr8:58137967..58139990-chr8:58271314..58273259,2	MCF-7	breast:
8	chr8:58462603..58464504-chr8:58491631..58493379,2	K562	blood:
9	chr8:58537334..58539259-chr8:58545738..58547653,2	K562	blood:
10	chr8:58489820..58490346-chr8:59307522..59308461,2	MCF-7	breast:
11	chr8:58277427..58279120-chr8:58279651..58282018,2	K562	blood:
12	chr8:58487606..58488471-chr8:58651601..58652426,3	MCF-7	breast:
13	chr8:58489931..58492018-chr8:58907170..58909246,2	MCF-7	breast:
14	chr8:58332707..58333926-chr8:58403565..58404649,11	MCF-7	breast:
15	chr8:58504798..58506738-chr8:58508959..58511696,2	MCF-7	breast:
16	chr8:58332845..58333756-chr8:59307075..59308444,4	K562	blood:
17	chr8:58489621..58490358-chr8:58651676..58652569,4	MCF-7	breast:
18	chr8:58460821..58463332-chr8:58465089..58467286,2	K562	blood:
19	chr8:58306190..58308420-chr8:58314986..58316770,2	MCF-7	breast:
20	chr8:58458453..58461364-chr8:58462477..58464451,2	MCF-7	breast:
21	chr3:27395027..27395631-chr8:58500130..58500818,2	MCF-7	breast:
22	chr8:58263769..58265340-chr8:58266166..58269019,2	K562	blood:
23	chr8:58487534..58488381-chr8:59156649..59157508,2	MCF-7	breast:
24	chr8:58504798..58506738-chr8:58508959..58511696,2	MCF-7	breast:
25	chr8:58332553..58333478-chr8:59230571..59231163,3	K562	blood:
26	chr8:58499798..58502598-chr8:59323213..59325065,2	MCF-7	breast:
27	chr8:58462603..58464504-chr8:58491631..58493379,2	K562	blood:
28	chr8:58487590..58488096-chr8:59301318..59302266,2	MCF-7	breast:
29	chr8:58332707..58333926-chr8:58403565..58404649,11	MCF-7	breast:
30	chr8:58404877..58405459-chr8:58487377..58488213,3	MCF-7	breast:
31	chr8:58460821..58463332-chr8:58465089..58467286,2	K562	blood:
32	chr8:58306190..58308420-chr8:58314986..58316770,2	MCF-7	breast:
33	chr8:58458453..58461364-chr8:58462477..58464451,2	MCF-7	breast:
34	chr8:58487549..58488499-chr8:59307870..59308447,3	MCF-7	breast:
35	chr8:58489495..58490193-chr8:58651461..58652081,3	MCF-7	breast:
36	chr8:58332657..58333329-chr8:58487609..58488171,2	MCF-7	breast:
37	chr8:58264759..58266862-chr8:58279202..58281751,2	K562	blood:
38	chr8:58334906..58335645-chr8:58403623..58404511,2	MCF-7	breast:
39	chr8:58256197..58257142-chr8:58333343..58333895,2	MCF-7	breast:
40	chr8:58537334..58539259-chr8:58545738..58547653,2	K562	blood:
41	chr8:58332821..58333771-chr8:58403706..58404764,4	MCF-7	breast:
42	chr8:58512585..58515336-chr8:58516943..58518859,2	K562	blood:
43	chr8:58332821..58333771-chr8:58403706..58404764,4	MCF-7	breast:

(count:46 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM110B-5	chr8:58277101-58277416	ENSG00000253871
2	lnc-FAM110B-12	chr8:58297708-58297984	l_3602_chr8:58277926-58304841_testes
3	lnc-FAM110B-12	chr8:58289071-58292265	l_3602_chr8:58277926-58304841_testes
4	lnc-FAM110B-11	chr8:58348579-58351315	l_3603_chr8:58348578-58353048_testes
5	lnc-FAM110B-5	chr8:58270005-58270083	NONHSAT126752
6	lnc-FAM110B-12	chr8:58284694-58285607	l_3602_chr8:58277926-58304841_testes
7	lnc-FAM110B-4	chr8:58405443-58405534	ENSG00000253821
8	lnc-FAM110B-5	chr8:58270005-58270083	ENSG00000253871
9	lnc-FAM110B-12	chr8:58305105-58305441	NONHSAT126753
10	lnc-FAM110B-4	chr8:58458029-58463564	NONHSAT126757
11	lnc-FAM110B-4	chr8:58504039-58504118	ENSG00000253821
12	lnc-FAM110B-12	chr8:58293308-58294764	l_3602_chr8:58277926-58304841_testes
13	lnc-FAM110B-12	chr8:58310778-58313593	l_3602_chr8:58277926-58304841_testes
14	lnc-FAM110B-12	chr8:58287501-58287565	l_3602_chr8:58277926-58304841_testes
15	lnc-FAM110B-10	chr8:58420077-58420253	ucscGeneNc_uc003xth_2
16	lnc-FAM110B-10	chr8:58439655-58439967	ucscGeneNc_uc003xth_2
17	lnc-FAM110B-4	chr8:58405426-58405506	NONHSAT126755
18	lnc-FAM110B-12	chr8:58283860-58283976	l_3602_chr8:58277926-58304841_testes
19	lnc-FAM110B-12	chr8:58288081-58288227	l_3602_chr8:58277926-58304841_testes
20	lnc-FAM110B-12	chr8:58306505-58308868	l_3602_chr8:58277926-58304841_testes
21	lnc-FAM110B-10	chr8:58418900-58419128	ucscGeneNc_uc003xth_2
22	lnc-FAM110B-12	chr8:58283726-58283775	l_3602_chr8:58277926-58304841_testes
23	lnc-FAM110B-12	chr8:58304658-58306143	l_3602_chr8:58277926-58304841_testes
24	lnc-FAM110B-10	chr8:58421807-58422176	ucscGeneNc_uc003xth_2
25	lnc-FAM110B-10	chr8:58432559-58432637	ucscGeneNc_uc003xth_2
26	lnc-FAM110B-12	chr8:58292837-58293300	l_3602_chr8:58277926-58304841_testes
27	lnc-FAM110B-10	chr8:58422335-58422521	ucscGeneNc_uc003xth_2
28	lnc-FAM110B-5	chr8:58277101-58277387	NONHSAT126752
29	lnc-FAM110B-12	chr8:58301255-58301738	l_3602_chr8:58277926-58304841_testes
30	lnc-FAM110B-11	chr8:58352607-58353048	l_3603_chr8:58348578-58353048_testes
31	lnc-FAM110B-4	chr8:58405427-58405506	XLOC_006808
32	lnc-FAM110B-12	chr8:58288228-58288385	l_3602_chr8:58277926-58304841_testes
33	lnc-FAM110B-12	chr8:58300092-58300340	l_3602_chr8:58277926-58304841_testes
34	lnc-IMPAD1-2	chr8:58506725-58507021	ENSG00000253322
35	lnc-FAM110B-4	chr8:58375465-58375636	NONHSAT126755
36	lnc-FAM110B-10	chr8:58428384-58428521	ucscGeneNc_uc003xth_2
37	lnc-FAM110B-10	chr8:58427573-58427690	ucscGeneNc_uc003xth_2
38	lnc-FAM110B-12	chr8:58296477-58297270	l_3602_chr8:58277926-58304841_testes
39	lnc-FAM110B-4	chr8:58375466-58375636	XLOC_006808
40	lnc-FAM110B-12	chr8:58277927-58281637	l_3602_chr8:58277926-58304841_testes
41	lnc-FAM110B-4	chr8:58405458-58405534	ENSG00000253821
42	lnc-FAM110B-12	chr8:58295172-58295408	l_3602_chr8:58277926-58304841_testes
43	lnc-FAM110B-4	chr8:58458028-58458502	ENSG00000253821
44	lnc-FAM110B-4	chr8:58405402-58405534	NONHSAT126757
45	lnc-FAM110B-10	chr8:58423482-58423699	ucscGeneNc_uc003xth_2
46	lnc-FAM110B-12	chr8:58297271-58297466	l_3602_chr8:58277926-58304841_testes

No data

Variant related genes	Relation type
RNU7-174P	TF binding region
ENSG00000253821	TF binding region
RPL30P10	TF binding region
ENSG00000215114	chromatin interactions
ENSG00000253821	chromatin interactions
ENSG00000253871	chromatin interactions

Extended variants
information (count: 8816 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:8816 , 50 per page) page: 1 2 3 4 5 6 7 ... 177

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543233639	chr8:58270037-58270038	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
2	rs1317803	chr8:58270099-58270100	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs369764140	chr8:58270119-58270120	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs143015414	chr8:58270133-58270134	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs72652945	chr8:58270135-58270136	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs112950195	chr8:58270136-58270137	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs373381245	chr8:58270185-58270186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs530467760	chr8:58270186-58270187	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs2875695	chr8:58270221-58270222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs71519480	chr8:58270252-58270253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs141185610	chr8:58270304-58270305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs150329704	chr8:58270310-58270311	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs138249128	chr8:58270330-58270331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs553157455	chr8:58270386-58270387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs566516418	chr8:58270434-58270435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs181407490	chr8:58270435-58270436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs56690481	chr8:58270471-58270472	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs375305755	chr8:58270509-58270510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs545369288	chr8:58270529-58270530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs543877854	chr8:58270537-58270538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs142945749	chr8:58270545-58270546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs113221845	chr8:58270558-58270559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs575865741	chr8:58270581-58270582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs185685282	chr8:58270586-58270587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs189854771	chr8:58270600-58270601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs544518662	chr8:58270601-58270602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs528629652	chr8:58270645-58270646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs180704801	chr8:58270649-58270650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs567239339	chr8:58270656-58270657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs561104710	chr8:58270723-58270724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs564678259	chr8:58270764-58270765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs187470767	chr8:58270772-58270773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs550186661	chr8:58270789-58270790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs567125916	chr8:58270802-58270803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs530019373	chr8:58270807-58270808	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs546540461	chr8:58270813-58270814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs566664397	chr8:58270834-58270835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs77020385	chr8:58270836-58270837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs552391071	chr8:58270841-58270842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs571804537	chr8:58270870-58270871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs530229300	chr8:58270884-58270885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs557405936	chr8:58270888-58270889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs146137082	chr8:58270898-58270899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs373466355	chr8:58270941-58270942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs553434775	chr8:58270968-58270969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs377225434	chr8:58270980-58270981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs545230174	chr8:58270986-58270987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs565113707	chr8:58271029-58271030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs575019662	chr8:58271106-58271107	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs79381001	chr8:58271110-58271111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Colorectal cancer	21645411	CNVD
Melanoma	22183965	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Recurrent pregnancy loss	19789632	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Renal cell carcinoma	21215367	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:975 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58270000-58270200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:58270200-58272000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:58272400-58272600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:58274800-58275800	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr8:58274800-58275800	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr8:58274800-58276000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr8:58275000-58275800	Enhancers	Primary B cells from peripheral blood	blood
8	chr8:58275000-58275800	Enhancers	Primary hematopoietic stem cells	blood
9	chr8:58275000-58275800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr8:58275000-58275800	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr8:58280600-58283200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
12	chr8:58280800-58282200	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
13	chr8:58281400-58281600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr8:58281400-58281800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
15	chr8:58281600-58284400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr8:58284400-58284600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr8:58285400-58286600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
18	chr8:58288200-58289800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr8:58288400-58289800	Enhancers	NHEK	skin
20	chr8:58288800-58289600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr8:58288800-58289800	Enhancers	Placenta Amnion	Placenta Amnion
22	chr8:58289000-58289400	Enhancers	Esophagus	oesophagus
23	chr8:58289800-58291000	Weak transcription	Placenta Amnion	Placenta Amnion
24	chr8:58290400-58291800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr8:58290600-58290800	Enhancers	Monocytes-CD14+_RO01746	blood
26	chr8:58290800-58291600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
27	chr8:58291000-58291400	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr8:58291000-58291400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr8:58291000-58291600	Enhancers	Primary hematopoietic stem cells	blood
30	chr8:58291000-58293000	Enhancers	Placenta Amnion	Placenta Amnion
31	chr8:58291600-58291800	Enhancers	Monocytes-CD14+_RO01746	blood
32	chr8:58291600-58293000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr8:58292800-58293000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr8:58300200-58300800	Enhancers	Fetal Muscle Leg	muscle
35	chr8:58300400-58302600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr8:58300600-58300800	Enhancers	HSMM	muscle
37	chr8:58300600-58301400	Enhancers	Adipose Nuclei	Adipose
38	chr8:58300600-58303000	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chr8:58300800-58301600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr8:58301000-58301400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr8:58301400-58301800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr8:58301400-58302000	Weak transcription	Adipose Nuclei	Adipose
43	chr8:58301800-58302400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr8:58302000-58302200	Enhancers	Adipose Nuclei	Adipose
45	chr8:58302400-58303000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr8:58302600-58303000	Enhancers	Placenta	Placenta
47	chr8:58308400-58308600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr8:58308600-58311200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr8:58310000-58311000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr8:58310000-58311800	Enhancers	Primary monocytes fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links