Variant report

Variant	nsv891049
Chromosome Location	chr8:78325885-78565529
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:707)
CpG islands
(count:244)
Chromatin interactive
region (count:10)
LncRNA
region (count:28)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:707 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr8:78555481-78555813	K562	blood:	n/a	n/a
2	ATF2	chr8:78443210-78443548	GM12878	blood:	n/a	n/a
3	BACH1	chr8:78454113-78454125	K562	blood:	n/a	n/a
4	BATF	chr8:78443175-78443539	GM12878	blood:	n/a	n/a
5	BCL11A	chr8:78443257-78443512	GM12878	blood:	n/a	n/a
6	BCL11A	chr8:78443187-78443554	GM12878	blood:	n/a	n/a
7	BHLHE40	chr8:78443196-78443567	GM12878	blood:	n/a	n/a
8	CCNT2	chr8:78330541-78330741	K562	blood:	n/a	n/a
9	CEBPB	chr8:78409324-78409328	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr8:78562055-78562566	IMR90	lung:	n/a	chr8:78562402-78562411 chr8:78562400-78562413 chr8:78562400-78562413 chr8:78562400-78562411 chr8:78562402-78562411 chr8:78562401-78562412 chr8:78562402-78562411 chr8:78562402-78562411
11	CEBPB	chr8:78353179-78353452	HepG2	liver:	n/a	chr8:78353329-78353340
12	CEBPB	chr8:78452880-78453156	HepG2	liver:	n/a	chr8:78452961-78452972 chr8:78452994-78453011
13	CEBPB	chr8:78477838-78478875	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr8:78519707-78520026	A549	lung:	n/a	chr8:78519862-78519873
15	CEBPB	chr8:78452850-78453246	A549	lung:	n/a	chr8:78452961-78452972 chr8:78452994-78453011
16	CEBPB	chr8:78442526-78442670	H1-hESC	embryonic stem cell:	n/a	chr8:78442621-78442634
17	CEBPB	chr8:78353220-78353465	A549	lung:	n/a	chr8:78353329-78353340
18	CEBPB	chr8:78468231-78468435	HepG2	liver:	n/a	chr8:78468305-78468316
19	CEBPB	chr8:78519731-78520013	H1-hESC	embryonic stem cell:	n/a	chr8:78519862-78519873
20	CEBPB	chr8:78562231-78562572	HepG2	liver:	n/a	chr8:78562402-78562411 chr8:78562400-78562413 chr8:78562400-78562413 chr8:78562400-78562411 chr8:78562402-78562411 chr8:78562401-78562412 chr8:78562402-78562411 chr8:78562402-78562411
21	CEBPB	chr8:78562353-78562456	H1-hESC	embryonic stem cell:	n/a	chr8:78562402-78562411 chr8:78562400-78562413 chr8:78562400-78562413 chr8:78562400-78562411 chr8:78562402-78562411 chr8:78562401-78562412 chr8:78562402-78562411 chr8:78562402-78562411
22	CEBPB	chr8:78519693-78520018	HepG2	liver:	n/a	chr8:78519862-78519873
23	CEBPB	chr8:78429937-78430448	ECC-1	luminal epithelium:	n/a	n/a
24	CEBPB	chr8:78519736-78519984	K562	blood:	n/a	chr8:78519862-78519873
25	CEBPB	chr8:78439603-78439794	HepG2	liver:	n/a	chr8:78439728-78439739
26	CEBPB	chr8:78476962-78477511	GM12878	blood:	n/a	n/a
27	CEBPB	chr8:78519697-78520014	Hela-S3	cervix:	n/a	chr8:78519862-78519873
28	CEBPB	chr8:78491634-78491975	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr8:78477769-78478779	ECC-1	luminal epithelium:	n/a	n/a
30	CEBPB	chr8:78477814-78478677	ECC-1	luminal epithelium:	n/a	n/a
31	CEBPB	chr8:78519699-78520036	IMR90	lung:	n/a	chr8:78519862-78519873
32	CEBPB	chr8:78562042-78562593	A549	lung:	n/a	chr8:78562402-78562411 chr8:78562400-78562413 chr8:78562400-78562413 chr8:78562400-78562411 chr8:78562402-78562411 chr8:78562401-78562412 chr8:78562402-78562411 chr8:78562402-78562411
33	CEBPB	chr8:78477893-78478185	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr8:78439675-78439913	Hela-S3	cervix:	n/a	chr8:78439728-78439739
35	CEBPB	chr8:78429873-78430418	ECC-1	luminal epithelium:	n/a	n/a
36	CHD2	chr8:78518693-78518694	GM12878	blood:	n/a	n/a
37	CTCF	chr8:78518520-78518670	HA-sp	spinal cord:	n/a	n/a
38	CTCF	chr8:78513140-78513290	Hela-S3	cervix:	n/a	n/a
39	CTCF	chr8:78518600-78518750	HRE	kidney:	n/a	n/a
40	CTCF	chr8:78518600-78518750	HCT-116	colon:	n/a	n/a
41	CTCF	chr8:78518480-78518630	GM12873	blood:	n/a	n/a
42	CTCF	chr8:78518540-78518690	GM12865	blood:	n/a	n/a
43	CTCF	chr8:78518483-78518720	LNCaP	prostate:	n/a	n/a
44	CTCF	chr8:78518560-78518710	BE2_C	brain:	n/a	n/a
45	CTCF	chr8:78513100-78513250	HCPEpiC	choroid plexus:	n/a	n/a
46	CTCF	chr8:78518520-78518670	GM12873	blood:	n/a	n/a
47	CTCF	chr8:78513100-78513250	HRPEpiC	eye:	n/a	n/a
48	CTCF	chr8:78513060-78513210	HPAF	blood vessel:	n/a	n/a
49	CTCF	chr8:78513200-78513350	BE2_C	brain:	n/a	n/a
50	CTCF	chr8:78513100-78513250	HMEC	breast:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:78533131-78533181	HRCEpiC	kidney:	n/a
2	chr8:78533097-78533147	Hela-S3	cervix:	n/a
3	chr8:78478065-78478115	LNCaP	prostate:	n/a
4	chr8:78533097-78533147	CMK	blood:	n/a
5	chr8:78533131-78533181	HRPEpiC	eye:	n/a
6	chr8:78533097-78533147	PFSK-1	brain:	n/a
7	chr8:78533097-78533147	HL-60	blood:	n/a
8	chr8:78478065-78478115	HCF	heart:	n/a
9	chr8:78478065-78478115	AG10803	skin:	n/a
10	chr8:78564866-78564916	HCF	heart:	n/a
11	chr8:78564866-78564916	Caco-2	colon:	n/a
12	chr8:78478065-78478115	U87	brain:	n/a
13	chr8:78564866-78564916	HMEC	breast:	n/a
14	chr8:78533097-78533147	NH-A	brain:	n/a
15	chr8:78533097-78533147	PrEC	prostate:	n/a
16	chr8:78564866-78564916	HNPCEpiC	eye:	n/a
17	chr8:78564866-78564916	Jurkat	blood:	n/a
18	chr8:78533131-78533181	AoSMC	blood vessel:	n/a
19	chr8:78533131-78533181	GM19239	blood:	n/a
20	chr8:78533131-78533181	HepG2	liver:	n/a
21	chr8:78533097-78533147	NHBE	bronchial:	n/a
22	chr8:78478065-78478115	IMR90	lung:	fetal
23	chr8:78533131-78533181	AG04449	skin:	fetal
24	chr8:78533097-78533147	SKMC	muscle:	n/a
25	chr8:78533097-78533147	HAEpiC	amniotic membrane:	n/a
26	chr8:78533097-78533147	AG09319	gingival:	n/a
27	chr8:78478065-78478115	HMEC	breast:	n/a
28	chr8:78533131-78533181	U87	brain:	n/a
29	chr8:78478065-78478115	HRE	kidney:	n/a
30	chr8:78533131-78533181	PFSK-1	brain:	n/a
31	chr8:78478065-78478115	HepG2	liver:	n/a
32	chr8:78478065-78478115	A549	lung:	n/a
33	chr8:78533097-78533147	HCPEpiC	choroid plexus:	n/a
34	chr8:78533131-78533181	BE2_C	brain:	n/a
35	chr8:78533097-78533147	U87	brain:	n/a
36	chr8:78533131-78533181	HCF	heart:	n/a
37	chr8:78478065-78478115	PrEC	prostate:	n/a
38	chr8:78564866-78564916	PrEC	prostate:	n/a
39	chr8:78564866-78564916	SAEC	small airway:	n/a
40	chr8:78533131-78533181	HMEC	breast:	n/a
41	chr8:78533097-78533147	AoSMC	blood vessel:	n/a
42	chr8:78478065-78478115	NT2-D1	testis:	n/a
43	chr8:78564866-78564916	HEK293	kidney:	embryo
44	chr8:78533097-78533147	PANC-1	pancreas:	n/a
45	chr8:78564866-78564916	HAEpiC	amniotic membrane:	n/a
46	chr8:78564866-78564916	NHDF-neo	bronchial:	n/a
47	chr8:78564866-78564916	ovcar-3	ovarian:	n/a
48	chr8:78533097-78533147	ECC-1	luminal epithelium:	n/a
49	chr8:78533097-78533147	IMR90	lung:	fetal
50	chr8:78478065-78478115	SK-N-MC	brain:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:78368406..78370853-chr8:78372527..78374399,2	MCF-7	breast:
2	chr8:78328564..78330206-chr8:78331648..78334520,2	K562	blood:
3	chr8:78490209..78491939-chr8:78494063..78496906,3	MCF-7	breast:
4	chr8:78518144..78519144-chr8:79144271..79145233,9	MCF-7	breast:
5	chr8:78366207..78368304-chr8:78370051..78372752,2	K562	blood:
6	chr8:78368406..78370853-chr8:78372527..78374399,2	MCF-7	breast:
7	chr8:78366207..78368304-chr8:78370051..78372752,2	K562	blood:
8	chr8:78512754..78513523-chr8:79163081..79163614,2	MCF-7	breast:
9	chr8:78328564..78330206-chr8:78331648..78334520,2	K562	blood:
10	chr8:78490209..78491939-chr8:78494063..78496906,3	MCF-7	breast:

(count:28 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZFHX4-3	chr8:78376237-78376304	NONHSAT127353
2	lnc-ZFHX4-3	chr8:78388520-78388617	ENSG00000254366
3	lnc-ZFHX4-3	chr8:78420742-78420833	NONHSAT127353
4	lnc-ZFHX4-3	chr8:78362892-78363014	XLOC_006852
5	lnc-ZFHX4-3	chr8:78388519-78388737	NONHSAT127353
6	lnc-ZFHX4-3	chr8:78376237-78376304	ENSG00000254366
7	lnc-ZFHX4-3	chr8:78376237-78376304	ENSG00000254366
8	lnc-ZFHX4-3	chr8:78449461-78449526	ENSG00000254366.2
9	lnc-ZFHX4-3	chr8:78362891-78363014	NONHSAT127353
10	lnc-ZFHX4-3	chr8:78436701-78436793	ENSG00000254366.2
11	lnc-ZFHX4-3	chr8:78420742-78420833	ENSG00000254366.2
12	lnc-ZFHX4-3	chr8:78388520-78388737	XLOC_006853
13	lnc-ZFHX4-3	chr8:78376237-78376304	ENSG00000254366.2
14	lnc-ZFHX4-3	chr8:78418018-78418245	ENSG00000254366.2
15	lnc-ZFHX4-3	chr8:78449461-78449526	NONHSAT127353
16	lnc-ZFHX4-3	chr8:78420742-78420833	ENSG00000254366
17	lnc-ZFHX4-3	chr8:78518908-78518940	ENSG00000254366
18	lnc-ZFHX4-3	chr8:78518908-78518940	NONHSAT127353
19	lnc-ZFHX4-3	chr8:78436701-78436793	ENSG00000254366
20	lnc-ZFHX4-3	chr8:78436701-78436793	NONHSAT127353
21	lnc-ZFHX4-3	chr8:78427531-78427586	ENSG00000254366
22	lnc-ZFHX4-3	chr8:78427531-78427586	ENSG00000254366.2
23	lnc-ZFHX4-3	chr8:78418018-78418245	NONHSAT127353
24	lnc-ZFHX4-3	chr8:78376247-78376304	XLOC_006853
25	lnc-ZFHX4-3	chr8:78427531-78427586	NONHSAT127353
26	lnc-ZFHX4-3	chr8:78362933-78363012	ENSG00000254366
27	lnc-ZFHX4-3	chr8:78418018-78418245	ENSG00000254366
28	lnc-ZFHX4-3	chr8:78449461-78449526	ENSG00000254366

No data

Variant related genes	Relation type
ENSG00000254366	TF binding region
ENSG00000254366	CpG island

Extended variants
information (count: 2770 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:2770 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs546304939	chr8:78347454-78347455	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs569330634	chr8:78347577-78347578	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs536888546	chr8:78347624-78347625	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs189634966	chr8:78347702-78347703	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs117990554	chr8:78347709-78347710	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs140857809	chr8:78347728-78347729	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs533875708	chr8:78347769-78347770	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs575679895	chr8:78347776-78347777	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs570440161	chr8:78347779-78347780	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs537718623	chr8:78347828-78347829	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs556449727	chr8:78347852-78347853	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs370984678	chr8:78347869-78347870	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs180831921	chr8:78347870-78347871	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs185929849	chr8:78347917-78347918	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs554639656	chr8:78347936-78347937	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs572963104	chr8:78347944-78347945	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs137864528	chr8:78347950-78347951	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs564908741	chr8:78348014-78348015	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs532567564	chr8:78348077-78348078	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs544565960	chr8:78348082-78348083	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs191982922	chr8:78348083-78348084	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs182282242	chr8:78348114-78348115	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs113007925	chr8:78348117-78348118	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs548755554	chr8:78348133-78348134	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs558850385	chr8:78348229-78348230	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs374595542	chr8:78348293-78348294	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs527344881	chr8:78348314-78348315	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs577250975	chr8:78348315-78348316	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs1828921	chr8:78348323-78348324	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs540864479	chr8:78348371-78348372	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs570328508	chr8:78348385-78348386	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs185929680	chr8:78348390-78348391	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs200929240	chr8:78348479-78348480	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs556174553	chr8:78348530-78348531	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs568389615	chr8:78348561-78348562	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs200236778	chr8:78348562-78348563	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs190437274	chr8:78348572-78348573	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs182637539	chr8:78348573-78348574	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs571932992	chr8:78348591-78348592	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs187010868	chr8:78348595-78348596	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs559043791	chr8:78348606-78348607	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs142673401	chr8:78348608-78348609	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs529737266	chr8:78348621-78348622	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs191259108	chr8:78348629-78348630	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs368329108	chr8:78348635-78348636	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs10957855	chr8:78348639-78348640	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs13261069	chr8:78348700-78348701	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs527912669	chr8:78348737-78348738	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs552284891	chr8:78348749-78348750	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs12056535	chr8:78348753-78348754	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Melanoma	22183965	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
Sezary syndrome	18413736	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Colorectal cancer	19455253	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Urothelial cell carcinoma	18451213	CNVD
Intellectual disability	21802062	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:142 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78347400-78349200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:78349200-78350400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:78350400-78350800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:78357000-78357400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr8:78362000-78363200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr8:78363200-78363600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:78363600-78363800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr8:78363800-78364000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr8:78364000-78374000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:78373600-78374400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:78374000-78374400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:78391200-78392400	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr8:78391400-78391800	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr8:78391400-78392600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr8:78396000-78396400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr8:78398600-78399600	Weak transcription	Pancreas	Pancrea
17	chr8:78399600-78399800	ZNF genes & repeats	Pancreas	Pancrea
18	chr8:78399800-78403400	Weak transcription	Pancreas	Pancrea
19	chr8:78401800-78402000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr8:78403600-78404600	Enhancers	H9 Cell Line	embryonic stem cell
21	chr8:78411200-78411600	Enhancers	HSMMtube	muscle
22	chr8:78411400-78412200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr8:78411800-78412400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr8:78414600-78415200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr8:78416200-78416400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr8:78420600-78420800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr8:78420800-78422000	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr8:78421000-78421400	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr8:78421000-78421400	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr8:78421000-78421600	Enhancers	HUES64 Cell Line	embryonic stem cell
31	chr8:78421000-78421600	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr8:78421400-78421600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr8:78421400-78421800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
34	chr8:78421600-78422000	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr8:78430000-78430400	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr8:78432400-78432800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr8:78432800-78433200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
38	chr8:78432800-78433400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
39	chr8:78435800-78436000	Enhancers	Brain Hippocampus Middle	brain
40	chr8:78438800-78439400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr8:78451400-78451800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr8:78451400-78452000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr8:78454400-78455000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr8:78460000-78460400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr8:78462800-78463200	ZNF genes & repeats	Fetal Muscle Leg	muscle
46	chr8:78463000-78463400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr8:78463600-78466000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr8:78464800-78465200	ZNF genes & repeats	Aorta	Aorta
49	chr8:78466000-78466400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr8:78477000-78477800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links