Variant report

Variant	nsv891206
Chromosome Location	chr8:96092251-96115476
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1046)
CpG islands
(count:61)
Chromatin interactive
region (count:84)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1046 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:96112153-96114204	HepG2	liver:	n/a	chr8:96113369-96113385
2	ARID3A	chr8:96114805-96115209	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:96113340-96114142	K562	blood:	n/a	chr8:96113369-96113385
4	ARID3A	chr8:96105371-96106093	K562	blood:	n/a	n/a
5	ARID3A	chr8:96102402-96103236	K562	blood:	n/a	n/a
6	ARID3A	chr8:96103446-96103806	K562	blood:	n/a	n/a
7	ATF1	chr8:96113296-96114174	K562	blood:	n/a	n/a
8	ATF1	chr8:96105295-96105794	K562	blood:	n/a	n/a
9	ATF1	chr8:96102445-96102938	K562	blood:	n/a	n/a
10	ATF2	chr8:96105345-96105761	GM12878	blood:	n/a	n/a
11	ATF2	chr8:96105026-96105333	GM12878	blood:	n/a	n/a
12	ATF2	chr8:96103243-96104895	GM12878	blood:	n/a	n/a
13	ATF2	chr8:96104900-96105824	GM12878	blood:	n/a	n/a
14	ATF2	chr8:96101699-96102919	GM12878	blood:	n/a	n/a
15	ATF2	chr8:96103241-96103917	GM12878	blood:	n/a	n/a
16	ATF2	chr8:96112509-96113511	GM12878	blood:	n/a	n/a
17	ATF2	chr8:96101850-96102848	GM12878	blood:	n/a	n/a
18	ATF2	chr8:96112677-96113259	GM12878	blood:	n/a	n/a
19	ATF2	chr8:96103963-96104614	GM12878	blood:	n/a	n/a
20	ATF3	chr8:96105367-96105699	K562	blood:	n/a	n/a
21	ATF3	chr8:96102499-96102916	K562	blood:	n/a	n/a
22	BACH1	chr8:96102586-96102974	K562	blood:	n/a	n/a
23	BATF	chr8:96105246-96105654	GM12878	blood:	n/a	n/a
24	BATF	chr8:96103463-96103814	GM12878	blood:	n/a	n/a
25	BATF	chr8:96104125-96104551	GM12878	blood:	n/a	chr8:96104325-96104336
26	BATF	chr8:96105090-96105776	GM12878	blood:	n/a	n/a
27	BATF	chr8:96112690-96113455	GM12878	blood:	n/a	n/a
28	BATF	chr8:96104119-96104514	GM12878	blood:	n/a	chr8:96104325-96104336
29	BATF	chr8:96112771-96113116	GM12878	blood:	n/a	n/a
30	BATF	chr8:96101845-96102327	GM12878	blood:	n/a	n/a
31	BCL11A	chr8:96103451-96103786	GM12878	blood:	n/a	n/a
32	BCL11A	chr8:96104195-96104442	GM12878	blood:	n/a	n/a
33	BCL11A	chr8:96104098-96104547	GM12878	blood:	n/a	n/a
34	BCL3	chr8:96104052-96104553	GM12878	blood:	n/a	n/a
35	BCL3	chr8:96103342-96103890	GM12878	blood:	n/a	n/a
36	BCL3	chr8:96101731-96102628	GM12878	blood:	n/a	chr8:96102445-96102454 chr8:96102051-96102060
37	BCL3	chr8:96105017-96105730	GM12878	blood:	n/a	n/a
38	BCLAF1	chr8:96102354-96102942	GM12878	blood:	n/a	chr8:96102445-96102454
39	BCLAF1	chr8:96103511-96104569	GM12878	blood:	n/a	n/a
40	BCLAF1	chr8:96105003-96105789	GM12878	blood:	n/a	n/a
41	BCLAF1	chr8:96101757-96103124	GM12878	blood:	n/a	chr8:96102445-96102454 chr8:96102051-96102060
42	BCLAF1	chr8:96105333-96105741	GM12878	blood:	n/a	n/a
43	BCLAF1	chr8:96109935-96110391	GM12878	blood:	n/a	chr8:96110256-96110264
44	BCLAF1	chr8:96112637-96113280	GM12878	blood:	n/a	chr8:96112768-96112777
45	BHLHE40	chr8:96102269-96103062	K562	blood:	n/a	n/a
46	BHLHE40	chr8:96115037-96115260	K562	blood:	n/a	n/a
47	BHLHE40	chr8:96104129-96104523	GM12878	blood:	n/a	n/a
48	BHLHE40	chr8:96103491-96103840	GM12878	blood:	n/a	n/a
49	BHLHE40	chr8:96105359-96105769	K562	blood:	n/a	n/a
50	BHLHE40	chr8:96105125-96105797	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:96112814-96112864	AG04450	lung:	fetal
2	chr8:96112814-96112864	HUVEC	blood vessel:	n/a
3	chr8:96112814-96112864	T-47D	breast:	n/a
4	chr8:96112814-96112864	H1-hESC	embryonic stem cell:	embryo
5	chr8:96112814-96112864	PFSK-1	brain:	n/a
6	chr8:96112814-96112864	GM19239	blood:	n/a
7	chr8:96112814-96112864	AG10803	skin:	n/a
8	chr8:96112814-96112864	ovcar-3	ovarian:	n/a
9	chr8:96112814-96112864	Jurkat	blood:	n/a
10	chr8:96112814-96112864	HCM	heart:	n/a
11	chr8:96112814-96112864	HCF	heart:	n/a
12	chr8:96112814-96112864	HEEpiC	esophagus:	n/a
13	chr8:96112814-96112864	AG04449	skin:	fetal
14	chr8:96112814-96112864	HMEC	breast:	n/a
15	chr8:96112814-96112864	SAEC	small airway:	n/a
16	chr8:96112814-96112864	Hela-S3	cervix:	n/a
17	chr8:96112814-96112864	NHDF-neo	bronchial:	n/a
18	chr8:96112814-96112864	HepG2	liver:	n/a
19	chr8:96112814-96112864	BJ	skin:	n/a
20	chr8:96112814-96112864	BE2_C	brain:	n/a
21	chr8:96112814-96112864	PANC-1	pancreas:	n/a
22	chr8:96112814-96112864	NH-A	brain:	n/a
23	chr8:96112814-96112864	CMK	blood:	n/a
24	chr8:96112814-96112864	NHBE	bronchial:	n/a
25	chr8:96112814-96112864	MCF-7	breast:	n/a
26	chr8:96112814-96112864	GM12878	blood:	n/a
27	chr8:96112814-96112864	SK-N-SH_RA	brain:	n/a
28	chr8:96112814-96112864	HL-60	blood:	n/a
29	chr8:96112814-96112864	HAEpiC	amniotic membrane:	n/a
30	chr8:96112814-96112864	HIPEpiC	eye:	n/a
31	chr8:96112814-96112864	AG09319	gingival:	n/a
32	chr8:96112814-96112864	Hepatocyte	liver:	n/a
33	chr8:96112814-96112864	A549	lung:	n/a
34	chr8:96112814-96112864	GM12891	blood:	n/a
35	chr8:96112814-96112864	NB4	blood:	n/a
36	chr8:96112814-96112864	ProgFib	skin:	n/a
37	chr8:96112814-96112864	HEK293	kidney:	embryo
38	chr8:96112814-96112864	AG09309	skin:	n/a
39	chr8:96112814-96112864	Caco-2	colon:	n/a
40	chr8:96112814-96112864	PrEC	prostate:	n/a
41	chr8:96112814-96112864	SKMC	muscle:	n/a
42	chr8:96112814-96112864	HCPEpiC	choroid plexus:	n/a
43	chr8:96112814-96112864	GM12892	blood:	n/a
44	chr8:96112814-96112864	ECC-1	luminal epithelium:	n/a
45	chr8:96112814-96112864	RPTEC	kidney:	n/a
46	chr8:96112814-96112864	HRE	kidney:	n/a
47	chr8:96112814-96112864	GM06990	blood:	n/a
48	chr8:96112814-96112864	HRPEpiC	eye:	n/a
49	chr8:96112814-96112864	LNCaP	prostate:	n/a
50	chr8:96112814-96112864	SK-N-MC	brain:	n/a

(count:84 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr8:96113223..96116394-chr8:96203733..96206616,4	MCF-7	breast:
2	chr8:96096428..96097966-chr8:96125843..96128409,2	K562	blood:
3	chr8:96112732..96115050-chr8:96203183..96205638,2	MCF-7	breast:
4	chr8:96102152..96104618-chr8:96259174..96260844,2	K562	blood:
5	chr8:95959986..95963224-chr8:96113461..96115470,3	MCF-7	breast:
6	chr8:96113683..96115248-chr8:96145285..96147511,2	K562	blood:
7	chr8:96102212..96104143-chr8:96108955..96110574,2	K562	blood:
8	chr8:95959920..95961566-chr8:96108874..96111712,2	MCF-7	breast:
9	chr8:96097174..96099699-chr8:96151326..96153504,2	MCF-7	breast:
10	chr8:95906412..95908805-chr8:96098165..96100293,2	MCF-7	breast:
11	chr1:149858166..149859995-chr8:96096320..96099010,2	MCF-7	breast:
12	chr8:96113132..96113798-chr8:96124482..96125247,3	MCF-7	breast:
13	chr8:96096089..96098113-chr8:96363999..96366342,2	MCF-7	breast:
14	chr8:96100647..96102577-chr8:96280334..96282911,2	MCF-7	breast:
15	chr8:96036531..96038925-chr8:96102648..96104628,2	K562	blood:
16	chr8:96036860..96039472-chr8:96108627..96112245,4	MCF-7	breast:
17	chr8:96104764..96108289-chr8:96108650..96112287,3	K562	blood:
18	chr8:96102212..96104143-chr8:96108955..96110574,2	K562	blood:
19	chr8:96095732..96098927-chr8:96100479..96105447,7	K562	blood:
20	chr8:96093323..96095396-chr8:96123393..96125579,2	MCF-7	breast:
21	chr8:96114675..96115219-chr8:96215202..96216074,2	MCF-7	breast:
22	chr8:96096484..96101537-chr8:96142870..96147410,9	MCF-7	breast:
23	chr8:96100801..96102864-chr8:96280312..96283160,2	K562	blood:
24	chr8:96092840..96095684-chr8:96102296..96104588,4	K562	blood:
25	chr8:96093660..96095211-chr8:96144861..96146789,2	K562	blood:
26	chr8:96106016..96107546-chr8:96145116..96146956,2	K562	blood:
27	chr8:96097941..96100243-chr8:97273935..97276169,2	MCF-7	breast:
28	chr8:96104764..96107063-chr8:96108642..96110810,3	K562	blood:
29	chr8:96115025..96117970-chr8:96278759..96280968,3	MCF-7	breast:
30	chr8:96086982..96089497-chr8:96096571..96099137,3	K562	blood:
31	chr8:96108471..96116302-chr8:96144708..96150629,15	MCF-7	breast:
32	chr8:95909127..95911685-chr8:96110779..96112456,2	MCF-7	breast:
33	chr8:96073662..96075442-chr8:96100722..96102763,2	K562	blood:
34	chr8:95906003..95908804-chr8:96112986..96114846,2	MCF-7	breast:
35	chr8:96104110..96106286-chr8:96127636..96129907,2	K562	blood:
36	chr8:96095701..96099568-chr8:96099629..96105496,9	K562	blood:
37	chr8:96103809..96105696-chr8:96115695..96118542,2	K562	blood:
38	chr8:96105550..96111124-chr8:96111232..96115383,7	K562	blood:
39	chr8:96100149..96103800-chr8:96104108..96108014,6	K562	blood:
40	chr8:96107778..96115564-chr8:96144421..96149353,22	MCF-7	breast:
41	chr8:96107905..96110477-chr8:96127013..96129331,2	K562	blood:
42	chr8:96095758..96103345-chr8:96144049..96152228,17	MCF-7	breast:
43	chr8:96108743..96110965-chr8:97274009..97275647,2	MCF-7	breast:
44	chr8:96114692..96118585-chr8:96123504..96126472,3	K562	blood:
45	chr8:95999822..96002067-chr8:96113841..96115533,2	MCF-7	breast:
46	chr8:96077629..96090166-chr8:96105796..96116852,50	MCF-7	breast:
47	chr8:96073817..96076023-chr8:96107819..96110019,2	MCF-7	breast:
48	chr17:56735002..56737611-chr8:96106065..96108769,2	MCF-7	breast:
49	chr8:95907523..95909755-chr8:96112942..96116370,3	MCF-7	breast:
50	chr8:95908200..95910154-chr8:96107875..96110236,2	MCF-7	breast:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TP53INP1-2	chr8:96097791-96097894	ENSG00000254248.1
2	lnc-PLEKHF2-3	chr8:96093160-96093807	NONHSAT127823
3	lnc-TP53INP1-2	chr8:96099874-96100152	ENSG00000254248.1
4	lnc-C8orf38-1	chr8:96115204-96115239	NONHSAT127816
5	lnc-C8orf38-1	chr8:96113360-96113454	NONHSAT127824
6	lnc-C8orf38-1	chr8:96112622-96112756	NONHSAT127824
7	lnc-PLEKHF2-3	chr8:96095231-96095554	NONHSAT127823
8	lnc-C8orf38-1	chr8:96115204-96115685	NONHSAT127824
9	lnc-C8orf38-1	chr8:96113360-96113454	NONHSAT127816

No data

Variant related genes	Relation type
NDUFAF6	TF binding region
ENSG00000254248	TF binding region
NDUFAF6	CpG island
ENSG00000254248	CpG island
ENSG00000156471	chromatin interactions
ENSG00000178096	chromatin interactions
ENSG00000253773	chromatin interactions
ENSG00000175305	chromatin interactions
ENSG00000253878	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000156170	chromatin interactions
ENSG00000164938	chromatin interactions
ENSG00000184260	chromatin interactions
ENSG00000164941	chromatin interactions
ENSG00000254248	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000175895	chromatin interactions
ENSG00000184678	chromatin interactions
ENSG00000184270	chromatin interactions
ENSG00000156172	chromatin interactions

Extended variants
information (count: 949 )
Associated
traits (count: 110 )

Variant overlapped rSNPs/rCNVs (count:949 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368501444	chr8:96092262-96092263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs188488909	chr8:96092263-96092264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs71273455	chr8:96092278-96092279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs574889885	chr8:96092289-96092290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs138965897	chr8:96092302-96092303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs72358346	chr8:96092346-96092347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs5027166	chr8:96092392-96092393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs143292340	chr8:96092409-96092410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs183442042	chr8:96092410-96092411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs187936726	chr8:96092422-96092423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs191556982	chr8:96092425-96092426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs531957779	chr8:96092450-96092451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs545705753	chr8:96092460-96092461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs374402474	chr8:96092534-96092535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs201591768	chr8:96092541-96092542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370520884	chr8:96092574-96092575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs564076741	chr8:96092599-96092600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs559887619	chr8:96092615-96092616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs183700838	chr8:96092635-96092636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs147119310	chr8:96092645-96092646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs540729979	chr8:96092672-96092673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs560605940	chr8:96092683-96092684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs66472024	chr8:96092690-96092691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs111162690	chr8:96092696-96092697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs529654998	chr8:96092699-96092700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs549719981	chr8:96092701-96092702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs201573817	chr8:96092709-96092710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs563464535	chr8:96092722-96092723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs71532346	chr8:96092735-96092736	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs112217477	chr8:96092748-96092749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs138670572	chr8:96092764-96092765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs117987646	chr8:96092767-96092768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs71521663	chr8:96092769-96092770	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs71273456	chr8:96092780-96092781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs71513074	chr8:96092781-96092782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs565867319	chr8:96092799-96092800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs112013561	chr8:96092813-96092814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs375355769	chr8:96092819-96092820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs372792658	chr8:96092820-96092821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs117629719	chr8:96092821-96092822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs368329056	chr8:96092825-96092826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs534763488	chr8:96092826-96092827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs113600523	chr8:96092839-96092840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs71569108	chr8:96092860-96092861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs149051662	chr8:96092871-96092872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs201822796	chr8:96092891-96092892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs187979054	chr8:96092894-96092895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs138800709	chr8:96092898-96092899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs200494931	chr8:96092899-96092900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs112077071	chr8:96092904-96092905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:110)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16461302	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	17847001	CNVD
Neuropsychiatric disorder	20069037	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Colorectal cancer	21645411	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Breast cancer	21611746	CNVD
Breast cancer	17142309	CNVD
Breast cancer	22522925	CNVD
Gastric cancer	22014070	CNVD

Chromatin state (count:584 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:96080200-96101800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:96085600-96098200	Weak transcription	Gastric	stomach
3	chr8:96086000-96098200	Weak transcription	Thymus	Thymus
4	chr8:96088200-96098000	Weak transcription	Fetal Kidney	kidney
5	chr8:96088600-96093800	Weak transcription	A549	lung
6	chr8:96088600-96097600	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr8:96088600-96098000	Weak transcription	K562	blood
8	chr8:96088800-96093600	Weak transcription	Fetal Intestine Small	intestine
9	chr8:96088800-96097000	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr8:96088800-96097600	Weak transcription	Placenta	Placenta
11	chr8:96088800-96098000	Weak transcription	HepG2	liver
12	chr8:96090600-96098200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr8:96091200-96094600	Weak transcription	Primary B cells from peripheral blood	blood
14	chr8:96091200-96095600	Weak transcription	Primary B cells from cord blood	blood
15	chr8:96094600-96094800	Enhancers	Primary B cells from peripheral blood	blood
16	chr8:96094800-96095200	Weak transcription	Primary B cells from peripheral blood	blood
17	chr8:96094800-96098000	Weak transcription	Primary hematopoietic stem cells	blood
18	chr8:96095200-96096200	Enhancers	Primary B cells from peripheral blood	blood
19	chr8:96095600-96096200	Enhancers	Primary B cells from cord blood	blood
20	chr8:96096200-96097200	Weak transcription	Primary B cells from cord blood	blood
21	chr8:96096200-96098000	Weak transcription	Primary B cells from peripheral blood	blood
22	chr8:96097000-96098000	Enhancers	Primary neutrophils fromperipheralblood	blood
23	chr8:96097200-96097400	Enhancers	Esophagus	oesophagus
24	chr8:96097200-96097800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr8:96097200-96098800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr8:96097200-96099200	Enhancers	Primary B cells from cord blood	blood
27	chr8:96097200-96099600	Enhancers	NHEK	skin
28	chr8:96097400-96100000	Weak transcription	Esophagus	oesophagus
29	chr8:96097600-96098000	Enhancers	Monocytes-CD14+_RO01746	blood
30	chr8:96097600-96098400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr8:96097600-96098600	Enhancers	Pancreas	Pancrea
32	chr8:96097600-96098800	Enhancers	H1 Cell Line	embryonic stem cell
33	chr8:96097600-96098800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr8:96097600-96099200	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr8:96097600-96100800	Enhancers	Placenta	Placenta
36	chr8:96097800-96098400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr8:96097800-96098800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr8:96098000-96098400	Enhancers	Primary hematopoietic stem cells	blood
39	chr8:96098000-96098400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
40	chr8:96098000-96098400	Enhancers	Stomach Mucosa	stomach
41	chr8:96098000-96098600	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr8:96098000-96098600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
43	chr8:96098000-96098600	Enhancers	Primary T helper cells fromperipheralblood	blood
44	chr8:96098000-96098600	Enhancers	Fetal Kidney	kidney
45	chr8:96098000-96098600	Enhancers	HUVEC	blood vessel
46	chr8:96098000-96098800	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr8:96098000-96098800	Enhancers	Primary B cells from peripheral blood	blood
48	chr8:96098000-96098800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr8:96098000-96098800	Enhancers	Dnd41	blood
50	chr8:96098000-96098800	Enhancers	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links