Variant report

Variant	nsv891428
Chromosome Location	chr8:124347228-124386782
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:320)
CpG islands
(count:0)
Chromatin interactive
region (count:37)
LncRNA
region (count:1)
Mature miRNA
region (count: 3)
miRNA target
sites (count:2)

(count:320 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:124386704-124387487	HepG2	liver:	n/a	n/a
2	BHLHE40	chr8:124386429-124386636	HepG2	liver:	n/a	n/a
3	CEBPB	chr8:124386508-124386595	A549	lung:	n/a	n/a
4	CEBPB	chr8:124359341-124359511	HepG2	liver:	n/a	chr8:124359423-124359434
5	CEBPB	chr8:124386414-124386689	HepG2	liver:	n/a	n/a
6	CEBPB	chr8:124386398-124386660	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr8:124386376-124386701	MCF-7	breast:	n/a	n/a
8	CEBPB	chr8:124386512-124386628	IMR90	lung:	n/a	n/a
9	CEBPB	chr8:124386376-124387184	HepG2	liver:	n/a	n/a
10	CEBPB	chr8:124373549-124373746	IMR90	lung:	n/a	chr8:124373665-124373674
11	CEBPB	chr8:124386377-124387409	HepG2	liver:	n/a	n/a
12	CTCF	chr8:124349092-124349159	LNCaP	prostate:	n/a	n/a
13	CTCF	chr8:124373380-124373458	GM13977	blood:	n/a	n/a
14	EBF1	chr8:124358273-124358394	GM12878	blood:	n/a	n/a
15	EP300	chr8:124386388-124386769	HepG2	liver:	n/a	n/a
16	EP300	chr8:124386427-124387167	HepG2	liver:	n/a	n/a
17	EP300	chr8:124386756-124387198	HepG2	liver:	n/a	chr8:124387162-124387169
18	FOS	chr8:124374912-124374986	MCF10A-Er-Src	breast:	n/a	n/a
19	FOS	chr8:124374904-124374985	MCF10A-Er-Src	breast:	n/a	n/a
20	FOS	chr8:124372821-124372928	MCF10A-Er-Src	breast:	n/a	n/a
21	FOS	chr8:124372740-124373007	MCF10A-Er-Src	breast:	n/a	n/a
22	FOS	chr8:124374942-124375129	MCF10A-Er-Src	breast:	n/a	n/a
23	FOXA1	chr8:124386270-124387191	HepG2	liver:	n/a	n/a
24	FOXA1	chr8:124386392-124386756	HepG2	liver:	n/a	n/a
25	FOXA1	chr8:124386281-124387345	HepG2	liver:	n/a	n/a
26	FOXA1	chr8:124386760-124387306	HepG2	liver:	n/a	n/a
27	FOXA1	chr8:124386296-124387349	HepG2	liver:	n/a	n/a
28	FOXA2	chr8:124386778-124387225	HepG2	liver:	n/a	n/a
29	FOXA2	chr8:124386313-124386741	HepG2	liver:	n/a	n/a
30	GATA3	chr8:124359049-124359385	SH-SY5Y	brain:	n/a	chr8:124359105-124359126
31	GATA3	chr8:124348580-124348804	SH-SY5Y	brain:	n/a	n/a
32	GTF3C2	chr8:124374682-124375076	Hela-S3	cervix:	n/a	n/a
33	HNF4A	chr8:124386346-124386695	HepG2	liver:	n/a	n/a
34	HNF4G	chr8:124386454-124386686	HepG2	liver:	n/a	chr8:124386574-124386589
35	IRF1	chr8:124358622-124358629	K562	blood:	n/a	n/a
36	IRF4	chr8:124372661-124372979	GM12878	blood:	n/a	n/a
37	JUN	chr8:124384453-124384563	H1-hESC	embryonic stem cell:	n/a	n/a
38	JUND	chr8:124374934-124374949	K562	blood:	n/a	n/a
39	JUND	chr8:124386542-124386548	HepG2	liver:	n/a	n/a
40	KAP1	chr8:124384312-124384712	K562	blood:	n/a	n/a
41	MAFK	chr8:124355088-124355284	HepG2	liver:	n/a	n/a
42	MXI1	chr8:124381608-124381674	GM12878	blood:	n/a	n/a
43	MYBL2	chr8:124386393-124387359	HepG2	liver:	n/a	n/a
44	NFIC	chr8:124386437-124387270	HepG2	liver:	n/a	n/a
45	NFIC	chr8:124386647-124387143	SK-N-SH	brain:	n/a	n/a
46	PBX3	chr8:124386659-124387271	SK-N-SH	brain:	n/a	n/a
47	POLR2A	chr8:124347084-124347393	K562	blood:	n/a	n/a
48	POLR2A	chr8:124363264-124363473	GM12891	blood:	n/a	n/a
49	POLR2A	chr8:124363359-124363390	HepG2	liver:	n/a	n/a
50	POLR2A	chr8:124350876-124350922	Hela-S3	cervix:	n/a	n/a

No data

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:124347435..124349910-chr8:124351248..124353916,2	K562	blood:
2	chr8:124353980..124356185-chr8:124356612..124358588,2	K562	blood:
3	chr8:124385450..124387905-chr8:124388662..124391653,2	MCF-7	breast:
4	chr8:124380936..124382475-chr8:124382876..124385641,2	MCF-7	breast:
5	chr8:124283582..124286272-chr8:124347189..124348924,2	K562	blood:
6	chr8:124372868..124374632-chr8:124380228..124381829,2	K562	blood:
7	chr8:124284778..124287529-chr8:124362568..124364349,2	MCF-7	breast:
8	chr8:124343470..124347292-chr8:124348142..124350551,3	K562	blood:
9	chr8:124285971..124288537-chr8:124358544..124361089,3	MCF-7	breast:
10	chr8:124347435..124348955-chr8:124350063..124352748,2	K562	blood:
11	chr8:124359033..124362786-chr8:124406148..124409759,5	MCF-7	breast:
12	chr8:124351068..124351903-chr9:134615174..134616014,2	MCF-7	breast:
13	chr8:124385603..124388132-chr8:124406900..124409549,3	MCF-7	breast:
14	chr8:124359668..124362710-chr8:124370089..124372806,3	K562	blood:
15	chr8:124346791..124348379-chr8:124349727..124351564,2	MCF-7	breast:
16	chr8:124346976..124349920-chr8:124356564..124359091,2	MCF-7	breast:
17	chr8:124359028..124361168-chr8:124371306..124373718,2	K562	blood:
18	chr8:124285519..124287863-chr8:124381287..124384269,2	K562	blood:
19	chr8:124353611..124356086-chr8:124356975..124361089,3	K562	blood:
20	chr8:124343470..124347292-chr8:124348142..124350551,3	K562	blood:
21	chr8:124366392..124368852-chr8:124427866..124430550,2	MCF-7	breast:
22	chr8:124285379..124288580-chr8:124385094..124387473,3	MCF-7	breast:
23	chr8:124346976..124349920-chr8:124356564..124359091,2	MCF-7	breast:
24	chr8:124382126..124384830-chr8:124407991..124409540,2	MCF-7	breast:
25	chr8:124364837..124367746-chr8:124368231..124372288,3	MCF-7	breast:
26	chr8:124346791..124348379-chr8:124349727..124351564,2	MCF-7	breast:
27	chr8:124344711..124346497-chr8:124367932..124369480,2	MCF-7	breast:
28	chr8:124382702..124384275-chr8:124427999..124430029,2	K562	blood:
29	chr8:124283886..124287542-chr8:124381015..124385016,4	MCF-7	breast:
30	chr8:124379694..124381870-chr8:124385514..124388273,2	MCF-7	breast:
31	chr8:124286585..124289064-chr8:124373830..124375504,2	K562	blood:
32	chr8:124347435..124348955-chr8:124350063..124352748,2	K562	blood:
33	chr8:124286264..124287996-chr8:124355045..124357165,2	K562	blood:
34	chr8:124382116..124384536-chr8:124401855..124404797,2	K562	blood:
35	chr8:124385275..124388266-chr8:124388466..124390853,2	K562	blood:
36	chr8:124347435..124349910-chr8:124351248..124353916,2	K562	blood:
37	chr8:124353611..124356086-chr8:124356975..124361089,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDYHV1-2	chr8:124364421-124364883	NONHSAT128543

miRNA name	Chromosome Location	mirBase accession
hsa-miR-548d-3p	chr8:124360289-124360310	MIMAT0003323_1
hsa-miR-548d-5p	chr8:124360325-124360346	MIMAT0004812_1
hsa-miR-548aa	chr8:124360328-124360352	MIMAT0018447_1

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ATAD2	hsa-miR-215-5p	chr8:124356815-124356835
2	ATAD2	hsa-miR-192-5p	chr8:124356815-124356835

Variant related genes	Relation type
DUTP2	TF binding region
MIR548D1	TF binding region
ATAD2	TF binding region
RNU6-875P	TF binding region
ENSG00000107263	chromatin interactions
ENSG00000156802	chromatin interactions
ENSG00000156795	chromatin interactions
ENSG00000165156	chromatin interactions
ENSG00000252297	chromatin interactions
ENSG00000207704	chromatin interactions

Extended variants
information (count: 1506 )
Associated
traits (count: 144 )

Variant overlapped rSNPs/rCNVs (count:1506 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11775312	chr8:124347228-124347229	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs562599669	chr8:124347265-124347266	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs531221545	chr8:124347275-124347276	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs184853604	chr8:124347298-124347299	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs572627149	chr8:124347366-124347367	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs77645713	chr8:124347383-124347384	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs570886155	chr8:124347427-124347428	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs533672519	chr8:124347501-124347502	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs374802110	chr8:124347570-124347571	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs547165790	chr8:124347611-124347612	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs567893713	chr8:124347625-124347626	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs187222006	chr8:124347644-124347645	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs539943600	chr8:124347728-124347729	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs191248694	chr8:124347732-124347733	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs576637221	chr8:124347759-124347760	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs539320869	chr8:124347760-124347761	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs77008800	chr8:124347879-124347880	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs556862615	chr8:124347880-124347881	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs572462084	chr8:124347901-124347902	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs541587664	chr8:124347910-124347911	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs35854633	chr8:124347927-124347928	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs115275149	chr8:124347954-124347955	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs576639564	chr8:124347974-124347975	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs146222572	chr8:124348065-124348066	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs542423159	chr8:124348178-124348179	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs113664019	chr8:124348196-124348197	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs576869216	chr8:124348255-124348256	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs531528626	chr8:124348361-124348362	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs551244159	chr8:124348364-124348365	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs139198923	chr8:124348369-124348370	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs113035444	chr8:124348379-124348380	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs527286396	chr8:124348392-124348393	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs547470851	chr8:124348502-124348503	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs567217631	chr8:124348539-124348540	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs80275261	chr8:124348556-124348557	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs375284169	chr8:124348566-124348567	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs200781545	chr8:124348577-124348578	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs144011403	chr8:124348610-124348611	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs373828023	chr8:124348651-124348652	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs117984846	chr8:124348685-124348686	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs34016670	chr8:124348687-124348688	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs367862663	chr8:124348751-124348752	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs4006498	chr8:124348799-124348800	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs367822597	chr8:124348814-124348815	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs372079128	chr8:124348821-124348822	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs376995699	chr8:124348823-124348824	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs4006497	chr8:124348851-124348852	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs4006496	chr8:124348853-124348854	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs189318919	chr8:124348861-124348862	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs566083404	chr8:124348866-124348867	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:144)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	17603634	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	20932292	CNVD
Gastric cancer	22539939	CNVD
Breast cancer	22056952	CNVD
Langer-Giedion syndrome	16773131	CNVD
Lung cancer	16740712	CNVD
Mental retardation	16773131	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Langer-Giedion syndrome	22470819	CNVD
Cornelia de Lange syndrome	24599119	CNVD
Gastric cancer	21528007	CNVD
Breast cancer	22532251	CNVD
Cervical cancer	21062161	CNVD
Cancer	21129771	CNVD
benign familial neonatal convulsions	18472482	CNVD
Breast cancer	16417655	CNVD
Astrocytoma	17387387	CNVD
Cancer	21183584	CNVD
Follicular lymphoma	20505157	CNVD
T-cell lymphomas	19863542	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	20607354	CNVD
Breast cancer	20814816	CNVD
Colorectal cancer	22486879	CNVD
Breast cancer	17908964	CNVD
Colorectal cancer	20031965	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian cancer	17908964	CNVD
Ovarian cancer	20031965	CNVD
Prostate cancer	20031965	CNVD
Non-small cell lung cancer	17643093	CNVD
Prostate cancer	19242612	CNVD
Colorectal cancer	16774939	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	18628472	CNVD
Malignant melanoma	17260012	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	16397240	CNVD
Multiple myeloma	16461302	CNVD
Multiple myeloma	16616336	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Breast cancer	21364760	CNVD
Burkitt''s lymphoma	20823134	CNVD
Colorectal cancer	21645411	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute myeloid leukemia	18379011	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Oral squamous cell carcinoma	21853135	CNVD
Breast cancer	21611746	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
T-cell lymphomas	22341440	CNVD
Prostate cancer	22341455	CNVD
Ductal carcinoma	22052326	CNVD

Chromatin state (count:953 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124323400-124349800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:124323600-124351000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr8:124325000-124379400	Weak transcription	Right Ventricle	heart
4	chr8:124326400-124372600	Weak transcription	Gastric	stomach
5	chr8:124326600-124349600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr8:124327000-124349400	Weak transcription	Fetal Brain Female	brain
7	chr8:124327600-124369200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr8:124328400-124386400	Weak transcription	Lung	lung
9	chr8:124328600-124357000	Weak transcription	Brain Hippocampus Middle	brain
10	chr8:124329000-124372600	Weak transcription	Esophagus	oesophagus
11	chr8:124329000-124379600	Weak transcription	Pancreas	Pancrea
12	chr8:124329200-124349000	Weak transcription	Small Intestine	intestine
13	chr8:124329400-124362000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr8:124329400-124385000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
15	chr8:124329600-124384200	Strong transcription	HUES64 Cell Line	embryonic stem cell
16	chr8:124329800-124394200	Strong transcription	Dnd41	blood
17	chr8:124330000-124355000	Weak transcription	NHLF	lung
18	chr8:124330200-124386400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:124330400-124348600	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr8:124330400-124349600	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr8:124330400-124383200	Weak transcription	Colonic Mucosa	Colon
22	chr8:124330400-124393400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
23	chr8:124330400-124394600	Strong transcription	Fetal Thymus	thymus
24	chr8:124330600-124365400	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr8:124330600-124393000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
26	chr8:124330800-124366200	Strong transcription	HUES6 Cell Line	embryonic stem cell
27	chr8:124330800-124366200	Strong transcription	Primary monocytes fromperipheralblood	blood
28	chr8:124331000-124377600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr8:124331200-124353200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr8:124331600-124383800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr8:124331800-124372200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr8:124332000-124361600	Strong transcription	HepG2	liver
33	chr8:124332200-124348600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
34	chr8:124332600-124348600	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr8:124332600-124372200	Weak transcription	Brain Angular Gyrus	brain
36	chr8:124332600-124372600	Weak transcription	Spleen	Spleen
37	chr8:124333000-124387600	Weak transcription	Fetal Brain Male	brain
38	chr8:124333200-124349600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr8:124333200-124371600	Weak transcription	Stomach Smooth Muscle	stomach
40	chr8:124334400-124378800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr8:124334600-124348800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr8:124334600-124349000	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr8:124334800-124349400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr8:124334800-124353800	Weak transcription	Ovary	ovary
45	chr8:124334800-124357200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr8:124334800-124360200	Strong transcription	K562	blood
47	chr8:124334800-124371400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
48	chr8:124335200-124349800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr8:124335200-124398600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
50	chr8:124335400-124349000	Weak transcription	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links