Variant report

Variant	nsv892080
Chromosome Location	chr9:2691186-2721249
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:164)
CpG islands
(count:672)
Chromatin interactive
region (count:6)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:164 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:2720014-2720751	HepG2	liver:	n/a	n/a
2	BHLHE40	chr9:2697445-2697801	GM12878	blood:	n/a	n/a
3	CEBPB	chr9:2701690-2701947	H1-hESC	embryonic stem cell:	n/a	chr9:2701846-2701859
4	CEBPB	chr9:2715500-2715698	HepG2	liver:	n/a	chr9:2715565-2715576
5	CEBPB	chr9:2720040-2720343	HepG2	liver:	n/a	n/a
6	CEBPB	chr9:2715391-2715602	A549	lung:	n/a	chr9:2715565-2715576
7	CHD2	chr9:2697629-2697756	GM12878	blood:	n/a	n/a
8	CTCF	chr9:2691692-2691704	GM13976	blood:	n/a	n/a
9	CTCF	chr9:2700607-2700624	Kidney_OC	kidney:	n/a	n/a
10	CTCF	chr9:2714160-2714450	HFF-Myc	foreskin:	n/a	n/a
11	CTCF	chr9:2691040-2691190	HMEC	breast:	n/a	n/a
12	CTCF	chr9:2693110-2693402	MCF-7	breast:	n/a	n/a
13	CTCF	chr9:2718840-2718990	WERI-Rb-1	eye:	n/a	n/a
14	CTCF	chr9:2691060-2691210	NB4	blood:	n/a	n/a
15	CTCF	chr9:2697840-2697990	GM12864	blood:	n/a	n/a
16	CTCF	chr9:2710660-2710810	GM12869	blood:	n/a	n/a
17	CTCF	chr9:2693230-2693302	Medullo	brain:	n/a	n/a
18	CTCF	chr9:2691060-2691210	WERI-Rb-1	eye:	n/a	n/a
19	CTCF	chr9:2691080-2691230	HMF	breast:	n/a	n/a
20	CTCF	chr9:2693207-2693377	MCF-7	breast:	n/a	n/a
21	CTCF	chr9:2718640-2718790	HEK293	kidney:	n/a	n/a
22	CTCF	chr9:2693160-2693310	GM12873	blood:	n/a	n/a
23	CTCF	chr9:2691040-2691190	HCPEpiC	choroid plexus:	n/a	n/a
24	CTCF	chr9:2693160-2693310	GM06990	blood:	n/a	n/a
25	CTCF	chr9:2691128-2691213	Hela-S3	cervix:	n/a	n/a
26	CTCF	chr9:2719122-2719139	ProgFib	skin:	n/a	n/a
27	CTCF	chr9:2693158-2693427	GM12878	blood:	n/a	n/a
28	CTCF	chr9:2718580-2718730	WERI-Rb-1	eye:	n/a	n/a
29	CTCF	chr9:2693267-2693299	GM12878	blood:	n/a	n/a
30	CTCF	chr9:2718460-2718610	WERI-Rb-1	eye:	n/a	n/a
31	CTCF	chr9:2718820-2718970	WERI-Rb-1	eye:	n/a	n/a
32	CTCF	chr9:2693229-2693323	MCF-7	breast:	n/a	n/a
33	CTCF	chr9:2691103-2691215	Medullo	brain:	n/a	n/a
34	CTCF	chr9:2705282-2705352	A549	lung:	n/a	n/a
35	CTCF	chr9:2700520-2700559	GM10248	blood:	n/a	n/a
36	CTCF	chr9:2693238-2693298	MCF-7	breast:	n/a	n/a
37	CTCF	chr9:2693140-2693290	GM12878	blood:	n/a	n/a
38	CTCF	chr9:2693220-2693370	MCF-7	breast:	n/a	n/a
39	CTCF	chr9:2717440-2717590	GM12871	blood:	n/a	n/a
40	CTCF	chr9:2710925-2710944	Kidney_OC	kidney:	n/a	n/a
41	CTCF	chr9:2693220-2693370	WERI-Rb-1	eye:	n/a	n/a
42	CTCF	chr9:2693218-2693359	MCF-7	breast:	n/a	n/a
43	CTCF	chr9:2691147-2691267	HUVEC	blood vessel:	n/a	n/a
44	CTCF	chr9:2691060-2691210	HCM	heart:	n/a	n/a
45	CUX1	chr9:2697497-2697895	GM12878	blood:	n/a	n/a
46	EBF1	chr9:2697448-2697970	GM12878	blood:	n/a	chr9:2697747-2697758
47	EBF1	chr9:2697424-2698083	GM12878	blood:	n/a	chr9:2697747-2697758
48	EBF1	chr9:2697457-2697934	GM12878	blood:	n/a	chr9:2697747-2697758
49	EBF1	chr9:2704594-2704850	GM12878	blood:	n/a	n/a
50	EP300	chr9:2720074-2720744	HepG2	liver:	n/a	chr9:2720624-2720638

(count:672 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:2717325-2717375	NH-A	brain:	n/a
2	chr9:2717325-2717375	NH-A	brain:	n/a
3	chr9:2718456-2718506	HRE	kidney:	n/a
4	chr9:2717146-2717196	MCF10A-Er-Src	breast:	n/a
5	chr9:2717621-2717671	HMEC	breast:	n/a
6	chr9:2715487-2715537	A549	lung:	n/a
7	chr9:2718738-2718788	HUVEC	blood vessel:	n/a
8	chr9:2717621-2717671	HRE	kidney:	n/a
9	chr9:2717531-2717581	GM12892	blood:	n/a
10	chr9:2717146-2717196	BE2_C	brain:	n/a
11	chr9:2717946-2717996	GM06990	blood:	n/a
12	chr9:2717338-2717388	U87	brain:	n/a
13	chr9:2717325-2717375	GM19239	blood:	n/a
14	chr9:2700667-2700717	U87	brain:	n/a
15	chr9:2717146-2717196	ECC-1	luminal epithelium:	n/a
16	chr9:2717325-2717375	HepG2	liver:	n/a
17	chr9:2717621-2717671	ProgFib	skin:	n/a
18	chr9:2715487-2715537	Hela-S3	cervix:	n/a
19	chr9:2717325-2717375	HUVEC	blood vessel:	n/a
20	chr9:2717146-2717196	Caco-2	colon:	n/a
21	chr9:2717338-2717388	GM19239	blood:	n/a
22	chr9:2717621-2717671	HUVEC	blood vessel:	n/a
23	chr9:2715487-2715537	PANC-1	pancreas:	n/a
24	chr9:2717531-2717581	SK-N-SH_RA	brain:	n/a
25	chr9:2700667-2700717	HEEpiC	esophagus:	n/a
26	chr9:2718738-2718788	K562	blood:	n/a
27	chr9:2717946-2717996	AG04450	lung:	fetal
28	chr9:2717621-2717671	HCPEpiC	choroid plexus:	n/a
29	chr9:2700667-2700717	HPAEpiC	pulmonary alveolar:	n/a
30	chr9:2717621-2717671	MCF10A-Er-Src	breast:	n/a
31	chr9:2718952-2719002	HCT-116	colon:	n/a
32	chr9:2718952-2719002	HEK293	kidney:	embryo
33	chr9:2718738-2718788	ECC-1	luminal epithelium:	n/a
34	chr9:2717531-2717581	SK-N-SH	brain:	n/a
35	chr9:2718456-2718506	NHDF-neo	bronchial:	n/a
36	chr9:2717146-2717196	SK-N-SH_RA	brain:	n/a
37	chr9:2717946-2717996	HL-60	blood:	n/a
38	chr9:2700667-2700717	AG04449	skin:	fetal
39	chr9:2717621-2717671	HepG2	liver:	n/a
40	chr9:2718738-2718788	HIPEpiC	eye:	n/a
41	chr9:2717621-2717671	SAEC	small airway:	n/a
42	chr9:2700667-2700717	NH-A	brain:	n/a
43	chr9:2717621-2717671	GM19239	blood:	n/a
44	chr9:2717338-2717388	GM12892	blood:	n/a
45	chr9:2717531-2717581	PrEC	prostate:	n/a
46	chr9:2718952-2719002	AG09309	skin:	n/a
47	chr9:2718456-2718506	GM12892	blood:	n/a
48	chr9:2718952-2719002	HEEpiC	esophagus:	n/a
49	chr9:2718738-2718788	MCF-7	breast:	n/a
50	chr9:2718738-2718788	GM12892	blood:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:2695521..2698232-chr9:3222806..3225730,2	K562	blood:
2	chr9:2717251..2720244-chr9:2720440..2722938,2	MCF-7	breast:
3	chr9:2697672..2699456-chr9:2700934..2702755,2	MCF-7	breast:
4	chr9:2697672..2699456-chr9:2700934..2702755,2	MCF-7	breast:
5	chr9:2708882..2710546-chr9:2712571..2714429,2	K562	blood:
6	chr9:2708882..2710546-chr9:2712571..2714429,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIAA0020-4	chr9:2697878-2698075	NONHSAT130005
2	lnc-KIAA0020-4	chr9:2700367-2700587	NONHSAT130005
3	lnc-KIAA0020-4	chr9:2704045-2704737	NONHSAT130005

No data

Variant related genes	Relation type
KCNV2	TF binding region
KCNV2	CpG island
ENSG00000168263	chromatin interactions

Extended variants
information (count: 1789 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:1789 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10738760	chr9:2691186-2691187	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
2	rs182547474	chr9:2691205-2691206	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs564709336	chr9:2691268-2691269	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs527498359	chr9:2691274-2691275	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs187347157	chr9:2691275-2691276	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs560896604	chr9:2691284-2691285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs114893003	chr9:2691315-2691316	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs549067460	chr9:2691326-2691327	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs10812473	chr9:2691329-2691330	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs531685937	chr9:2691348-2691349	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs551870549	chr9:2691368-2691369	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs192296982	chr9:2691390-2691391	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs569127597	chr9:2691427-2691428	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs534420950	chr9:2691444-2691445	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs10812474	chr9:2691446-2691447	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs567998120	chr9:2691456-2691457	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs138124488	chr9:2691479-2691480	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs142789768	chr9:2691485-2691486	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs576008825	chr9:2691492-2691493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs146070482	chr9:2691507-2691508	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs75395320	chr9:2691528-2691529	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs10812475	chr9:2691546-2691547	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs138116983	chr9:2691549-2691550	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs142707252	chr9:2691554-2691555	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs145984860	chr9:2691558-2691559	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs543724056	chr9:2691560-2691561	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs562790132	chr9:2691571-2691572	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs148666525	chr9:2691575-2691576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs531768984	chr9:2691583-2691584	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs184630752	chr9:2691588-2691589	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs571814414	chr9:2691645-2691646	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs532011525	chr9:2691661-2691662	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs10122524	chr9:2691667-2691668	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs547968429	chr9:2691686-2691687	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs78079285	chr9:2691695-2691696	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs75276731	chr9:2691696-2691697	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs536515833	chr9:2691743-2691744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs142095881	chr9:2691749-2691750	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs527709461	chr9:2691766-2691767	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs547866693	chr9:2691799-2691800	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs150750810	chr9:2691800-2691801	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs139107821	chr9:2691832-2691833	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs570946827	chr9:2691846-2691847	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs188921355	chr9:2691862-2691863	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs540731962	chr9:2691895-2691896	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs554316724	chr9:2691933-2691934	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs10122587	chr9:2691951-2691952	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs145010955	chr9:2691975-2691976	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568989278	chr9:2692019-2692020	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs563630852	chr9:2692038-2692039	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Gastric cancer	16715143	CNVD
Glioblastoma multiforme	22286061	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	21373258	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Ovarian cancer	22355333	CNVD
Schizophrenia	20967226	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Renal cell carcinoma	21215367	CNVD
Cancer	21215367	CNVD

Chromatin state (count:229 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:2679400-2692400	Weak transcription	Psoas Muscle	Psoas
2	chr9:2687200-2693200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr9:2688200-2691400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:2688600-2702400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr9:2689200-2692200	Enhancers	Fetal Heart	heart
6	chr9:2689600-2691800	Weak transcription	Ovary	ovary
7	chr9:2689800-2700200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr9:2690000-2691200	Enhancers	Left Ventricle	heart
9	chr9:2690000-2692600	Enhancers	HUVEC	blood vessel
10	chr9:2690000-2702600	Weak transcription	Primary T cells from cord blood	blood
11	chr9:2690400-2691200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr9:2690600-2718000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr9:2690800-2691200	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr9:2690800-2700600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr9:2691000-2691600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr9:2691200-2691400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr9:2691200-2692200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr9:2691200-2692200	Enhancers	Placenta Amnion	Placenta Amnion
19	chr9:2691200-2710600	Weak transcription	Left Ventricle	heart
20	chr9:2691400-2692000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr9:2691400-2692200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr9:2691400-2692600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr9:2691600-2692200	Enhancers	Muscle Satellite Cultured Cells	--
24	chr9:2692000-2709600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr9:2692200-2693200	Weak transcription	Fetal Heart	heart
26	chr9:2693200-2694000	Enhancers	Fetal Heart	heart
27	chr9:2696600-2700600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
28	chr9:2697200-2698600	Enhancers	GM12878-XiMat	blood
29	chr9:2697200-2722800	Weak transcription	HSMM	muscle
30	chr9:2697600-2698200	Enhancers	Adipose Nuclei	Adipose
31	chr9:2697800-2698000	Enhancers	Esophagus	oesophagus
32	chr9:2697800-2698200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr9:2698000-2717600	Weak transcription	Esophagus	oesophagus
34	chr9:2698200-2700400	Weak transcription	Adipose Nuclei	Adipose
35	chr9:2699000-2702200	Enhancers	iPS-15b Cell Line	embryonic stem cell
36	chr9:2699200-2701400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr9:2699400-2702200	Enhancers	HUES64 Cell Line	embryonic stem cell
38	chr9:2699600-2700400	Enhancers	iPS-20b Cell Line	embryonic stem cell
39	chr9:2699800-2700000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr9:2699800-2700600	Enhancers	iPS-18 Cell Line	embryonic stem cell
41	chr9:2699800-2701000	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr9:2699800-2701600	Enhancers	H1 Cell Line	embryonic stem cell
43	chr9:2699800-2702000	Enhancers	H9 Cell Line	embryonic stem cell
44	chr9:2700000-2701000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr9:2700000-2701400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr9:2700000-2701600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr9:2700200-2700600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr9:2700200-2701400	Enhancers	Fetal Heart	heart
49	chr9:2700200-2701800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr9:2700400-2701200	Enhancers	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links