Variant report

Variant	nsv892095
Chromosome Location	chr9:3650174-3749196
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:703)
CpG islands
(count:183)
Chromatin interactive
region (count:29)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:703 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:3732638-3732949	HepG2	liver:	n/a	n/a
2	ATF2	chr9:3730258-3731050	GM12878	blood:	n/a	n/a
3	ATF2	chr9:3732636-3732977	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr9:3730328-3731026	GM12878	blood:	n/a	n/a
5	ATF3	chr9:3746245-3746846	HCT-116	colon:	n/a	n/a
6	BACH1	chr9:3689736-3689800	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr9:3656298-3656558	GM12878	blood:	n/a	n/a
8	BATF	chr9:3730393-3730769	GM12878	blood:	n/a	n/a
9	BATF	chr9:3656318-3656576	GM12878	blood:	n/a	n/a
10	BATF	chr9:3730359-3730752	GM12878	blood:	n/a	n/a
11	BATF	chr9:3732615-3732940	GM12878	blood:	n/a	n/a
12	BCL3	chr9:3746372-3746604	GM12878	blood:	n/a	n/a
13	BCL3	chr9:3746365-3746596	GM12878	blood:	n/a	n/a
14	BCL3	chr9:3651345-3651710	GM12878	blood:	n/a	n/a
15	BHLHE40	chr9:3730503-3730941	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:3651100-3651575	GM12878	blood:	n/a	n/a
17	BHLHE40	chr9:3732610-3733404	GM12878	blood:	n/a	n/a
18	BHLHE40	chr9:3661642-3661842	K562	blood:	n/a	n/a
19	CBX3	chr9:3746215-3746792	HCT-116	colon:	n/a	n/a
20	CBX3	chr9:3746250-3746881	HCT-116	colon:	n/a	n/a
21	CEBPB	chr9:3736321-3736389	K562	blood:	n/a	n/a
22	CEBPB	chr9:3667066-3667291	H1-hESC	embryonic stem cell:	n/a	chr9:3667147-3667158
23	CEBPB	chr9:3746367-3746694	IMR90	lung:	n/a	chr9:3746423-3746431 chr9:3746434-3746445
24	CEBPB	chr9:3715552-3715713	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr9:3740624-3741174	MCF-7	breast:	n/a	n/a
26	CEBPB	chr9:3706616-3706966	IMR90	lung:	n/a	chr9:3706784-3706797 chr9:3706784-3706797 chr9:3706785-3706796 chr9:3706783-3706800 chr9:3706784-3706795
27	CEBPB	chr9:3706629-3706948	A549	lung:	n/a	chr9:3706784-3706797 chr9:3706784-3706797 chr9:3706785-3706796 chr9:3706783-3706800 chr9:3706784-3706795
28	CEBPB	chr9:3737038-3737377	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr9:3730360-3731175	GM12878	blood:	n/a	chr9:3730629-3730642
30	CEBPB	chr9:3708532-3709297	ECC-1	luminal epithelium:	n/a	n/a
31	CEBPB	chr9:3737059-3737353	IMR90	lung:	n/a	n/a
32	CEBPB	chr9:3736299-3736587	IMR90	lung:	n/a	n/a
33	CEBPB	chr9:3746193-3746882	HCT-116	colon:	n/a	chr9:3746212-3746224 chr9:3746423-3746431 chr9:3746434-3746445
34	CEBPB	chr9:3706704-3706956	Hela-S3	cervix:	n/a	chr9:3706784-3706797 chr9:3706784-3706797 chr9:3706785-3706796 chr9:3706783-3706800 chr9:3706784-3706795
35	CEBPB	chr9:3736276-3736634	Hela-S3	cervix:	n/a	chr9:3736601-3736618
36	CEBPB	chr9:3667037-3667287	A549	lung:	n/a	chr9:3667147-3667158
37	CEBPB	chr9:3671067-3671327	HepG2	liver:	n/a	n/a
38	CEBPB	chr9:3704902-3705209	HepG2	liver:	n/a	chr9:3705057-3705068 chr9:3705058-3705069 chr9:3705057-3705070 chr9:3705057-3705070 chr9:3705057-3705068
39	CEBPB	chr9:3650762-3650973	HepG2	liver:	n/a	chr9:3650859-3650872 chr9:3650856-3650873 chr9:3650859-3650870
40	CEBPB	chr9:3667017-3667275	HepG2	liver:	n/a	chr9:3667147-3667158
41	CEBPB	chr9:3740792-3741114	ECC-1	luminal epithelium:	n/a	n/a
42	CEBPB	chr9:3737071-3737297	A549	lung:	n/a	n/a
43	CEBPB	chr9:3740648-3741150	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr9:3667036-3667296	IMR90	lung:	n/a	chr9:3667147-3667158
45	CEBPB	chr9:3667020-3667258	K562	blood:	n/a	chr9:3667147-3667158
46	CEBPB	chr9:3651301-3651734	GM12878	blood:	n/a	n/a
47	CEBPB	chr9:3740802-3740928	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr9:3671154-3671354	A549	lung:	n/a	n/a
49	CEBPB	chr9:3704996-3705199	A549	lung:	n/a	chr9:3705057-3705068 chr9:3705058-3705069 chr9:3705057-3705070 chr9:3705057-3705070 chr9:3705057-3705068
50	CEBPB	chr9:3706611-3706974	HepG2	liver:	n/a	chr9:3706784-3706797 chr9:3706784-3706797 chr9:3706785-3706796 chr9:3706783-3706800 chr9:3706784-3706795

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:3732719-3732769	HCM	heart:	n/a
2	chr9:3741918-3741968	GM12892	blood:	n/a
3	chr9:3732719-3732769	HL-60	blood:	n/a
4	chr9:3732719-3732769	MCF10A-Er-Src	breast:	n/a
5	chr9:3732719-3732769	SKMC	muscle:	n/a
6	chr9:3732719-3732769	AG04449	skin:	fetal
7	chr9:3741918-3741968	GM12878	blood:	n/a
8	chr9:3734089-3734139	SK-N-SH_RA	brain:	n/a
9	chr9:3732719-3732769	T-47D	breast:	n/a
10	chr9:3734089-3734139	BE2_C	brain:	n/a
11	chr9:3734089-3734139	HPAEpiC	pulmonary alveolar:	n/a
12	chr9:3732719-3732769	HAEpiC	amniotic membrane:	n/a
13	chr9:3732719-3732769	PANC-1	pancreas:	n/a
14	chr9:3732719-3732769	HepG2	liver:	n/a
15	chr9:3734089-3734139	ovcar-3	ovarian:	n/a
16	chr9:3741918-3741968	NT2-D1	testis:	n/a
17	chr9:3732719-3732769	GM06990	blood:	n/a
18	chr9:3734089-3734139	GM12878	blood:	n/a
19	chr9:3741918-3741968	PANC-1	pancreas:	n/a
20	chr9:3732719-3732769	GM19239	blood:	n/a
21	chr9:3741918-3741968	Jurkat	blood:	n/a
22	chr9:3734089-3734139	HRCEpiC	kidney:	n/a
23	chr9:3741918-3741968	HRE	kidney:	n/a
24	chr9:3734089-3734139	MCF10A-Er-Src	breast:	n/a
25	chr9:3732719-3732769	HCT-116	colon:	n/a
26	chr9:3734089-3734139	AG04449	skin:	fetal
27	chr9:3732719-3732769	NH-A	brain:	n/a
28	chr9:3732719-3732769	HEEpiC	esophagus:	n/a
29	chr9:3734089-3734139	ECC-1	luminal epithelium:	n/a
30	chr9:3741918-3741968	HIPEpiC	eye:	n/a
31	chr9:3734089-3734139	HEEpiC	esophagus:	n/a
32	chr9:3734089-3734139	MCF-7	breast:	n/a
33	chr9:3734089-3734139	HCF	heart:	n/a
34	chr9:3732719-3732769	AG10803	skin:	n/a
35	chr9:3741918-3741968	NHBE	bronchial:	n/a
36	chr9:3741918-3741968	AG09309	skin:	n/a
37	chr9:3732719-3732769	AG04450	lung:	fetal
38	chr9:3734089-3734139	HL-60	blood:	n/a
39	chr9:3734089-3734139	HAEpiC	amniotic membrane:	n/a
40	chr9:3732719-3732769	HEK293	kidney:	embryo
41	chr9:3734089-3734139	HCM	heart:	n/a
42	chr9:3734089-3734139	A549	lung:	n/a
43	chr9:3732719-3732769	A549	lung:	n/a
44	chr9:3741918-3741968	GM19239	blood:	n/a
45	chr9:3741918-3741968	IMR90	lung:	fetal
46	chr9:3732719-3732769	PFSK-1	brain:	n/a
47	chr9:3734089-3734139	SK-N-SH	brain:	n/a
48	chr9:3741918-3741968	BE2_C	brain:	n/a
49	chr9:3741918-3741968	AG10803	skin:	n/a
50	chr9:3734089-3734139	HNPCEpiC	eye:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:3732366..3733251-chr9:4117087..4118391,3	K562	blood:
2	chr9:3684957..3686893-chr9:3690032..3691953,2	MCF-7	breast:
3	chr9:3697208..3698903-chr9:3702495..3704955,2	MCF-7	breast:
4	chr9:3524840..3527643-chr9:3741904..3743839,2	MCF-7	breast:
5	chr9:3732447..3733442-chr9:4375097..4375609,2	MCF-7	breast:
6	chr9:3690355..3691926-chr9:3696454..3698344,2	MCF-7	breast:
7	chr9:3684957..3686893-chr9:3690032..3691953,2	MCF-7	breast:
8	chr9:3732377..3733427-chr9:3848513..3849486,3	MCF-7	breast:
9	chr9:3697208..3698903-chr9:3702495..3704955,2	MCF-7	breast:
10	chr9:3655163..3657660-chr9:3672402..3674386,2	K562	blood:
11	chr9:3649975..3652712-chr9:3654160..3655972,2	K562	blood:
12	chr9:3690355..3691926-chr9:3696454..3698344,2	MCF-7	breast:
13	chr9:3655163..3657660-chr9:3672402..3674386,2	K562	blood:
14	chr9:3732376..3733230-chr9:4197636..4198214,2	MCF-7	breast:
15	chr9:3710815..3712584-chr9:3716346..3718840,2	K562	blood:
16	chr9:3745021..3747309-chr9:3753591..3756284,2	MCF-7	breast:
17	chr9:3740143..3743133-chr9:3750828..3752470,2	MCF-7	breast:
18	chr9:3710815..3712584-chr9:3716346..3718840,2	K562	blood:
19	chr9:3734772..3737587-chr9:3739336..3741707,3	MCF-7	breast:
20	chr9:3732396..3733264-chr9:3993863..3994418,3	MCF-7	breast:
21	chr9:3526118..3527672-chr9:3696360..3698362,2	MCF-7	breast:
22	chr9:3739277..3741186-chr9:3742194..3744298,2	K562	blood:
23	chr9:3734772..3737587-chr9:3739336..3741707,3	MCF-7	breast:
24	chr9:3605941..3608408-chr9:3657516..3659534,2	K562	blood:
25	chr9:3739277..3741186-chr9:3742194..3744298,2	K562	blood:
26	chr9:3740432..3743307-chr9:4038327..4039972,2	MCF-7	breast:
27	chr9:3732415..3733255-chr9:4228331..4229005,2	MCF-7	breast:
28	chr9:3649975..3652712-chr9:3654160..3655972,2	K562	blood:
29	chr9:3741373..3743189-chr9:3757793..3760497,2	MCF-7	breast:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC1A1-4	chr9:3691504-3691814	ENSG00000235326
2	lnc-SLC1A1-4	chr9:3674546-3674648	ENSG00000235326
3	lnc-GLIS3-3	chr9:3674076-3674459	NONHSAT130032
4	lnc-GLIS3-1	chr9:3684076-3684459	ENSG00000226669.2
5	lnc-SLC1A1-12	chr9:3661474-3661660	l_3729_chr9:3656973-3664950_testes
6	lnc-SLC1A1-12	chr9:3664411-3665024	l_3729_chr9:3656973-3664950_testes
7	lnc-SLC1A1-4	chr9:3690837-3690959	ENSG00000235326
8	lnc-GLIS3-1	chr9:3684076-3684459	XLOC_007633
9	lnc-GLIS3-1	chr9:3689335-3689626	XLOC_007633
10	lnc-KCNV2-3	chr9:3671477-3671624	ENSG00000232104
11	lnc-KCNV2-3	chr9:3671474-3671646	ENSG00000232104
12	lnc-GLIS3-1	chr9:3689332-3689626	ENSG00000226669.2
13	lnc-SLC1A1-12	chr9:3656974-3658408	l_3729_chr9:3656973-3664950_testes
14	lnc-SLC1A1-12	chr9:3664546-3664648	NONHSAT130030
15	lnc-KCNV2-3	chr9:3668086-3668408	ENSG00000232104
16	lnc-SLC1A1-12	chr9:3680837-3680959	NONHSAT130030
17	lnc-GLIS3-3	chr9:3679335-3679626	NONHSAT130032
18	lnc-KCNV2-3	chr9:3671477-3671634	ENSG00000232104.2
19	lnc-SLC1A1-12	chr9:3681504-3681814	NONHSAT130030

No data

Variant related genes	Relation type
ENSG00000226669	TF binding region
ENSG00000232104	TF binding region
ENSG00000235326	TF binding region
ENSG00000226669	CpG island
ENSG00000232104	CpG island
ENSG00000235326	CpG island
ENSG00000080298	chromatin interactions
ENSG00000232104	chromatin interactions
ENSG00000107249	chromatin interactions
KLF4	miRNA target sites

Extended variants
information (count: 3237 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:3237 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1548299	chr9:3650174-3650175	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs531932055	chr9:3650188-3650189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs552014594	chr9:3650211-3650212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs577890358	chr9:3650237-3650238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs571541087	chr9:3650274-3650275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs377524285	chr9:3650285-3650286	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs143835585	chr9:3650342-3650343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs193212987	chr9:3650343-3650344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs374482173	chr9:3650350-3650351	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs567012357	chr9:3650403-3650404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs535897451	chr9:3650505-3650506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs151272024	chr9:3650518-3650519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs569600414	chr9:3650557-3650558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184877547	chr9:3650731-3650732	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs558795713	chr9:3650880-3650881	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs572318881	chr9:3650906-3650907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs12379966	chr9:3650939-3650940	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs533038456	chr9:3650946-3650947	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs554767936	chr9:3650984-3650985	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs73389788	chr9:3651028-3651029	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs543077436	chr9:3651040-3651041	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs572820283	chr9:3651041-3651042	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs562753683	chr9:3651052-3651053	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs540099338	chr9:3651082-3651083	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs188461723	chr9:3651243-3651244	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs545404036	chr9:3651316-3651317	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs540557024	chr9:3651335-3651336	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs140523968	chr9:3651339-3651340	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs191337311	chr9:3651354-3651355	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs10814387	chr9:3651396-3651397	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs567491618	chr9:3651446-3651447	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs529768766	chr9:3651459-3651460	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549832572	chr9:3651488-3651489	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs184288503	chr9:3651512-3651513	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373713268	chr9:3651522-3651523	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs188535565	chr9:3651529-3651530	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs558621760	chr9:3651547-3651548	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs374043990	chr9:3651551-3651552	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs565992338	chr9:3651569-3651570	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs534864794	chr9:3651599-3651600	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs576826742	chr9:3651632-3651633	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs544422748	chr9:3651634-3651635	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs150010826	chr9:3651711-3651712	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs574648663	chr9:3651749-3651750	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs367815465	chr9:3651771-3651772	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs556597160	chr9:3651799-3651800	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs145157144	chr9:3651814-3651815	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs181797804	chr9:3651815-3651816	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs142351548	chr9:3651842-3651843	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs548655143	chr9:3651843-3651844	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Gastric cancer	16715143	CNVD
Glioblastoma multiforme	22286061	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	21373258	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Autism	20808228	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:400 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:3647800-3678200	Weak transcription	Psoas Muscle	Psoas
2	chr9:3649200-3650600	Weak transcription	GM12878-XiMat	blood
3	chr9:3649200-3651200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:3649200-3657800	Weak transcription	Gastric	stomach
5	chr9:3650600-3652000	Enhancers	GM12878-XiMat	blood
6	chr9:3651200-3651600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr9:3656400-3656800	Enhancers	GM12878-XiMat	blood
8	chr9:3656600-3663400	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr9:3657200-3661200	Weak transcription	Pancreas	Pancrea
10	chr9:3657800-3658000	Enhancers	Gastric	stomach
11	chr9:3658000-3658800	Active TSS	Spleen	Spleen
12	chr9:3658000-3673600	Weak transcription	Gastric	stomach
13	chr9:3658600-3659000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr9:3659400-3659800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr9:3659400-3660000	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr9:3659400-3660200	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr9:3659800-3660000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr9:3659800-3660200	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr9:3659800-3661000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr9:3659800-3676200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr9:3660000-3660800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr9:3660000-3660800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:3660200-3661400	Enhancers	Fetal Lung	lung
24	chr9:3660800-3661000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr9:3660800-3661000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr9:3660800-3661400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr9:3660800-3661400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr9:3660800-3661800	Enhancers	Fetal Heart	heart
29	chr9:3660800-3662200	Enhancers	Adipose Nuclei	Adipose
30	chr9:3661000-3661200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr9:3661000-3661400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr9:3661200-3661600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr9:3661200-3661600	Enhancers	NH-A	brain
34	chr9:3661400-3661800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr9:3661400-3663800	Weak transcription	Fetal Lung	lung
36	chr9:3661400-3664200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr9:3661600-3661800	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr9:3661600-3662200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr9:3662200-3664000	Weak transcription	Adipose Nuclei	Adipose
40	chr9:3662600-3663200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr9:3663000-3663400	Enhancers	HSMMtube	muscle
42	chr9:3663800-3664200	Enhancers	Fetal Lung	lung
43	chr9:3663800-3664400	Enhancers	Colon Smooth Muscle	Colon
44	chr9:3663800-3664600	Enhancers	NHLF	lung
45	chr9:3664000-3664400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr9:3664000-3664400	Enhancers	Adipose Nuclei	Adipose
47	chr9:3664000-3664600	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr9:3664200-3664600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr9:3664200-3664600	Enhancers	Stomach Smooth Muscle	stomach
50	chr9:3664600-3666800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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