Variant report

Variant	nsv892206
Chromosome Location	chr9:7641251-7682601
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 978 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:978 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141169674	chr9:7647209-7647210	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs547239499	chr9:7647236-7647237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs538736509	chr9:7647242-7647243	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs145066699	chr9:7647256-7647257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs575223157	chr9:7647258-7647259	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs569078408	chr9:7647269-7647270	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs537603755	chr9:7647270-7647271	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs79349621	chr9:7647280-7647281	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs398010258	chr9:7647282-7647283	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs542616112	chr9:7647283-7647284	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs566847996	chr9:7647286-7647287	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs78975441	chr9:7647295-7647296	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs558982756	chr9:7647328-7647329	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs531936739	chr9:7647332-7647333	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs540737178	chr9:7647402-7647403	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs565465866	chr9:7647406-7647407	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs532785230	chr9:7647449-7647450	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs80036119	chr9:7647477-7647478	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs551294089	chr9:7647504-7647505	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs563217661	chr9:7647507-7647508	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs1905759	chr9:7647536-7647537	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs377625937	chr9:7647574-7647575	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs547847072	chr9:7647612-7647613	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs566475194	chr9:7647641-7647642	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs113045518	chr9:7647643-7647644	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs533633149	chr9:7647644-7647645	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs551880068	chr9:7647657-7647658	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs577778845	chr9:7647669-7647670	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs75025240	chr9:7647682-7647683	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs34849939	chr9:7647700-7647701	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs537688930	chr9:7647723-7647724	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs555948540	chr9:7647754-7647755	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs140601038	chr9:7647780-7647781	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs143778682	chr9:7647800-7647801	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs554632621	chr9:7647842-7647843	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs537921487	chr9:7647858-7647859	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs370914154	chr9:7647860-7647861	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs115750586	chr9:7647863-7647864	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs187949286	chr9:7647881-7647882	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs10976474	chr9:7647900-7647901	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs554740517	chr9:7647904-7647905	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs192614597	chr9:7647929-7647930	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs184814594	chr9:7647958-7647959	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs142029707	chr9:7647969-7647970	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs374248824	chr9:7647973-7647974	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs150260421	chr9:7647976-7647977	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs548895737	chr9:7648009-7648010	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs61294240	chr9:7648015-7648016	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs377487099	chr9:7648034-7648035	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs565782936	chr9:7648040-7648041	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	21811587	CNVD

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:7647200-7647400	Enhancers	Fetal Heart	heart
2	chr9:7647400-7647800	Flanking Active TSS	Fetal Heart	heart
3	chr9:7647800-7648200	Enhancers	Fetal Heart	heart
4	chr9:7648200-7656400	Weak transcription	Fetal Heart	heart
5	chr9:7652200-7653200	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr9:7652400-7654400	Enhancers	HUVEC	blood vessel
7	chr9:7652600-7654200	Enhancers	Adipose Nuclei	Adipose
8	chr9:7653000-7654200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr9:7653000-7654200	Enhancers	Fetal Lung	lung
10	chr9:7653200-7653800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
11	chr9:7653200-7654000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr9:7653400-7653800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr9:7653400-7654000	Enhancers	Primary T cells from cord blood	blood
14	chr9:7653400-7654000	Enhancers	Primary hematopoietic stem cells	blood
15	chr9:7653600-7653800	Enhancers	Brain Hippocampus Middle	brain
16	chr9:7653600-7654000	Enhancers	Brain Cingulate Gyrus	brain
17	chr9:7653800-7655600	Enhancers	Primary neutrophils fromperipheralblood	blood
18	chr9:7654000-7656400	Weak transcription	Brain Cingulate Gyrus	brain
19	chr9:7654000-7656600	Weak transcription	Brain Hippocampus Middle	brain
20	chr9:7654400-7656400	Weak transcription	HUVEC	blood vessel
21	chr9:7656400-7657000	Enhancers	Brain Inferior Temporal Lobe	brain
22	chr9:7656400-7657200	Enhancers	Fetal Heart	heart
23	chr9:7656400-7657400	Enhancers	Brain Cingulate Gyrus	brain
24	chr9:7656400-7658000	Enhancers	HUVEC	blood vessel
25	chr9:7656600-7656800	Flanking Active TSS	Brain Hippocampus Middle	brain
26	chr9:7656600-7657000	Enhancers	Lung	lung
27	chr9:7656600-7657200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
28	chr9:7656600-7657200	Enhancers	Fetal Muscle Leg	muscle
29	chr9:7656600-7657200	Enhancers	Pancreas	Pancrea
30	chr9:7656600-7657200	Enhancers	Rectal Mucosa Donor 31	rectum
31	chr9:7656600-7657200	Enhancers	Stomach Mucosa	stomach
32	chr9:7656600-7657400	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr9:7656600-7657400	Enhancers	Right Ventricle	heart
34	chr9:7656800-7657000	Enhancers	Brain Hippocampus Middle	brain
35	chr9:7656800-7657200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr9:7656800-7657200	Enhancers	Left Ventricle	heart
37	chr9:7656800-7657200	Enhancers	Ovary	ovary
38	chr9:7656800-7657200	Enhancers	Spleen	Spleen
39	chr9:7656800-7657400	Enhancers	Brain Anterior Caudate	brain
40	chr9:7656800-7657400	Enhancers	Brain Substantia Nigra	brain
41	chr9:7657000-7657200	Flanking Active TSS	Brain Hippocampus Middle	brain
42	chr9:7657000-7657200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
43	chr9:7657200-7657400	Enhancers	Brain Hippocampus Middle	brain
44	chr9:7657200-7657600	Enhancers	Primary T helper cells PMA-I stimulated	--
45	chr9:7657200-7657600	Active TSS	Brain Inferior Temporal Lobe	brain
46	chr9:7657200-7659400	Weak transcription	Fetal Heart	heart
47	chr9:7657200-7659800	Weak transcription	Spleen	Spleen
48	chr9:7659400-7660200	Enhancers	Fetal Heart	heart
49	chr9:7665400-7666200	Enhancers	H1 Cell Line	embryonic stem cell
50	chr9:7665400-7666400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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