Variant report

Variant	nsv892249
Chromosome Location	chr9:9026854-9377679
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:9054602-9054923	HepG2	liver:	n/a	n/a
2	CEBPB	chr9:9294001-9294320	HepG2	liver:	n/a	chr9:9294176-9294187
3	CEBPB	chr9:9255418-9255716	HepG2	liver:	n/a	n/a
4	CEBPB	chr9:9293996-9294301	A549	lung:	n/a	chr9:9294176-9294187
5	CEBPB	chr9:9162786-9162996	H1-hESC	embryonic stem cell:	n/a	n/a
6	CEBPB	chr9:9162739-9163026	IMR90	lung:	n/a	n/a
7	CEBPB	chr9:9340162-9340258	H1-hESC	embryonic stem cell:	n/a	n/a
8	CEBPB	chr9:9226711-9226991	IMR90	lung:	n/a	chr9:9226847-9226860 chr9:9226849-9226860 chr9:9226847-9226858
9	CEBPB	chr9:9226688-9226885	K562	blood:	n/a	chr9:9226847-9226860 chr9:9226849-9226860 chr9:9226847-9226858
10	CEBPB	chr9:9050578-9050640	H1-hESC	embryonic stem cell:	n/a	chr9:9050601-9050612 chr9:9050622-9050633
11	CEBPB	chr9:9174449-9174740	HepG2	liver:	n/a	chr9:9174591-9174600 chr9:9174590-9174601 chr9:9174656-9174669 chr9:9174589-9174602 chr9:9174589-9174600
12	CEBPB	chr9:9184906-9185209	HepG2	liver:	n/a	chr9:9185056-9185069 chr9:9185058-9185069 chr9:9185058-9185067 chr9:9184998-9185011 chr9:9185056-9185067
13	CEBPB	chr9:9069738-9070034	HepG2	liver:	n/a	chr9:9069872-9069881
14	CEBPB	chr9:9191327-9191565	HepG2	liver:	n/a	n/a
15	CEBPB	chr9:9054670-9055043	HepG2	liver:	n/a	chr9:9054827-9054838 chr9:9054861-9054872
16	CEBPB	chr9:9214265-9214465	HepG2	liver:	n/a	chr9:9214334-9214345
17	CEBPB	chr9:9174467-9174707	IMR90	lung:	n/a	chr9:9174591-9174600 chr9:9174590-9174601 chr9:9174656-9174669 chr9:9174589-9174602 chr9:9174589-9174600
18	CEBPB	chr9:9184992-9185148	IMR90	lung:	n/a	chr9:9185056-9185069 chr9:9185058-9185069 chr9:9185058-9185067 chr9:9184998-9185011 chr9:9185056-9185067
19	CEBPB	chr9:9097309-9097586	H1-hESC	embryonic stem cell:	n/a	n/a
20	CEBPB	chr9:9226707-9226943	A549	lung:	n/a	chr9:9226847-9226860 chr9:9226849-9226860 chr9:9226847-9226858
21	CEBPB	chr9:9226676-9227019	HepG2	liver:	n/a	chr9:9226847-9226860 chr9:9226849-9226860 chr9:9226847-9226858
22	CEBPB	chr9:9050461-9050785	A549	lung:	n/a	chr9:9050601-9050612 chr9:9050622-9050633
23	CEBPB	chr9:9069789-9070000	IMR90	lung:	n/a	chr9:9069872-9069881
24	CEBPB	chr9:9162739-9163039	A549	lung:	n/a	n/a
25	CEBPB	chr9:9162728-9163029	HepG2	liver:	n/a	n/a
26	CEBPB	chr9:9177863-9178135	HepG2	liver:	n/a	chr9:9177988-9177999
27	CEBPB	chr9:9184918-9185156	H1-hESC	embryonic stem cell:	n/a	chr9:9185056-9185069 chr9:9185058-9185069 chr9:9185058-9185067 chr9:9184998-9185011 chr9:9185056-9185067
28	CEBPB	chr9:9177847-9178081	A549	lung:	n/a	chr9:9177988-9177999
29	CEBPB	chr9:9050446-9050796	HepG2	liver:	n/a	chr9:9050601-9050612 chr9:9050622-9050633
30	CEBPB	chr9:9219422-9219423	H1-hESC	embryonic stem cell:	n/a	n/a
31	CEBPB	chr9:9124942-9125086	H1-hESC	embryonic stem cell:	n/a	n/a
32	CTCF	chr9:9353000-9353150	HBMEC	blood vessel:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
33	CTCF	chr9:9352950-9353151	SK-N-SH_RA	brain:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
34	CTCF	chr9:9353000-9353150	AG04449	skin:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
35	CTCF	chr9:9337240-9337390	GM12870	blood:	n/a	chr9:9337334-9337342
36	CTCF	chr9:9337200-9337350	GM12874	blood:	n/a	chr9:9337334-9337342
37	CTCF	chr9:9299256-9299386	HepG2	liver:	n/a	n/a
38	CTCF	chr9:9353040-9353190	A549	lung:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
39	CTCF	chr9:9352944-9353210	HUVEC	blood vessel:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
40	CTCF	chr9:9353000-9353150	Hela-S3	cervix:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
41	CTCF	chr9:9352980-9353176	Spleen_OC	spleen:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
42	CTCF	chr9:9353029-9353172	MCF-7	breast:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
43	CTCF	chr9:9299279-9299305	HepG2	liver:	n/a	n/a
44	CTCF	chr9:9353000-9353150	HA-sp	spinal cord:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079
45	CTCF	chr9:9337270-9337477	GM12878	blood:	n/a	chr9:9337334-9337342
46	CTCF	chr9:9179580-9179730	AG10803	skin:	n/a	chr9:9179717-9179725
47	CTCF	chr9:9190557-9190582	LNCaP	prostate:	n/a	n/a
48	CTCF	chr9:9353100-9353250	HFF	foreskin:	n/a	n/a
49	CTCF	chr9:9337300-9337450	GM06990	blood:	n/a	chr9:9337334-9337342
50	CTCF	chr9:9352980-9353130	AG09319	gingival:	n/a	chr9:9353070-9353079 chr9:9353064-9353082 chr9:9353066-9353079

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:9091180-9091230	Jurkat	blood:	n/a
2	chr9:9091180-9091230	Jurkat	blood:	n/a
3	chr9:9091180-9091230	HCT-116	colon:	n/a
4	chr9:9091180-9091230	PrEC	prostate:	n/a
5	chr9:9091180-9091230	HRE	kidney:	n/a
6	chr9:9091180-9091230	NH-A	brain:	n/a
7	chr9:9091180-9091230	NHBE	bronchial:	n/a
8	chr9:9091180-9091230	BE2_C	brain:	n/a
9	chr9:9091180-9091230	Hela-S3	cervix:	n/a
10	chr9:9091180-9091230	HRCEpiC	kidney:	n/a
11	chr9:9091180-9091230	HEEpiC	esophagus:	n/a
12	chr9:9091180-9091230	AG04450	lung:	fetal
13	chr9:9091180-9091230	GM12878	blood:	n/a
14	chr9:9091180-9091230	MCF10A-Er-Src	breast:	n/a
15	chr9:9091180-9091230	ovcar-3	ovarian:	n/a
16	chr9:9091180-9091230	AG09309	skin:	n/a
17	chr9:9091180-9091230	ECC-1	luminal epithelium:	n/a
18	chr9:9091180-9091230	HIPEpiC	eye:	n/a
19	chr9:9091180-9091230	HAEpiC	amniotic membrane:	n/a
20	chr9:9091180-9091230	NHDF-neo	bronchial:	n/a
21	chr9:9091180-9091230	MCF-7	breast:	n/a
22	chr9:9091180-9091230	U87	brain:	n/a
23	chr9:9091180-9091230	HL-60	blood:	n/a
24	chr9:9091180-9091230	HUVEC	blood vessel:	n/a
25	chr9:9091180-9091230	SAEC	small airway:	n/a
26	chr9:9091180-9091230	HepG2	liver:	n/a
27	chr9:9091180-9091230	HCF	heart:	n/a
28	chr9:9091180-9091230	H1-hESC	embryonic stem cell:	embryo
29	chr9:9091180-9091230	HNPCEpiC	eye:	n/a
30	chr9:9091180-9091230	SKMC	muscle:	n/a
31	chr9:9091180-9091230	GM12892	blood:	n/a
32	chr9:9091180-9091230	NT2-D1	testis:	n/a
33	chr9:9091180-9091230	CMK	blood:	n/a
34	chr9:9091180-9091230	SK-N-SH_RA	brain:	n/a
35	chr9:9091180-9091230	LNCaP	prostate:	n/a
36	chr9:9091180-9091230	SK-N-SH	brain:	n/a
37	chr9:9091180-9091230	IMR90	lung:	fetal
38	chr9:9091180-9091230	K562	blood:	n/a
39	chr9:9091180-9091230	SK-N-MC	brain:	n/a
40	chr9:9091180-9091230	AG09319	gingival:	n/a
41	chr9:9091180-9091230	AoSMC	blood vessel:	n/a
42	chr9:9091180-9091230	GM19239	blood:	n/a
43	chr9:9091180-9091230	GM12891	blood:	n/a
44	chr9:9091180-9091230	ProgFib	skin:	n/a
45	chr9:9091180-9091230	RPTEC	kidney:	n/a
46	chr9:9091180-9091230	Hepatocyte	liver:	n/a
47	chr9:9091180-9091230	T-47D	breast:	n/a
48	chr9:9091180-9091230	HCM	heart:	n/a
49	chr9:9091180-9091230	PFSK-1	brain:	n/a
50	chr9:9091180-9091230	BJ	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:56435572..56436393-chr9:9090873..9091393,3	MCF-7	breast:
2	chr9:9128289..9130655-chr9:9131606..9133901,2	K562	blood:
3	chr9:9353280..9355692-chr9:9355746..9358583,2	K562	blood:
4	chr12:56434645..56437118-chr9:9089375..9092373,2	K562	blood:
5	chr9:9179702..9181500-chr9:9182795..9185230,2	K562	blood:
6	chr12:56434264..56436145-chr9:9090873..9092394,2	K562	blood:
7	chr12:56435690..56436195-chr9:9090395..9091395,2	HCT-116	colon:
8	chr9:9353280..9355692-chr9:9355746..9358583,2	K562	blood:
9	chr9:9128289..9130655-chr9:9131606..9133901,2	K562	blood:
10	chr9:9179702..9181500-chr9:9182795..9185230,2	K562	blood:
11	chr12:56435752..56436286-chr9:9090373..9090875,2	MCF-7	breast:

Variant related genes	Relation type
RPS26P3	TF binding region
RPS26P3	CpG island
ENSG00000257449	chromatin interactions
ENSG00000197728	chromatin interactions

Extended variants
information (count: 5368 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:5368 , 50 per page) page: 1 2 3 4 5 6 7 ... 108

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs167785	chr9:9026854-9026855	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs537519891	chr9:9026909-9026910	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs542781906	chr9:9026929-9026930	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs72692867	chr9:9026961-9026962	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs189869084	chr9:9027005-9027006	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs114844102	chr9:9027010-9027011	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs10759028	chr9:9027017-9027018	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs544567768	chr9:9027070-9027071	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs556657727	chr9:9027083-9027084	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs74736042	chr9:9027088-9027089	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs542301517	chr9:9027102-9027103	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs562187855	chr9:9027103-9027104	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs562588181	chr9:9027112-9027113	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs569715258	chr9:9027141-9027142	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs541364553	chr9:9027168-9027169	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs117115836	chr9:9027185-9027186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs192567146	chr9:9033016-9033017	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs564723516	chr9:9033069-9033070	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs142113375	chr9:9033148-9033149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs578218700	chr9:9033160-9033161	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs151180152	chr9:9033168-9033169	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs538325704	chr9:9034405-9034406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs556129544	chr9:9034429-9034430	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs535469752	chr9:9034432-9034433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs548921923	chr9:9034437-9034438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs190256101	chr9:9034522-9034523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs182825817	chr9:9034529-9034530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs34149040	chr9:9034556-9034557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs565884992	chr9:9034582-9034583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs138518765	chr9:9034596-9034597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs73430116	chr9:9034610-9034611	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs144100390	chr9:9034646-9034647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs558104137	chr9:9034658-9034659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs150705268	chr9:9034672-9034673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs76756890	chr9:9034694-9034695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs114702026	chr9:9034724-9034725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs187471194	chr9:9034727-9034728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs548489564	chr9:9034778-9034779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs566799048	chr9:9034802-9034803	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs534202201	chr9:9034815-9034816	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs552192009	chr9:9034825-9034826	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs570820180	chr9:9034851-9034852	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs139872132	chr9:9034951-9034952	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs79948180	chr9:9034970-9034971	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs568177313	chr9:9034987-9034988	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535616762	chr9:9034988-9034989	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs149413397	chr9:9034991-9034992	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs375941215	chr9:9034996-9034997	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs144485435	chr9:9035004-9035005	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs546111319	chr9:9035014-9035015	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:116)

Disease	PMID	Source
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	21811587	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Lung cancer	20668451	CNVD
Schizophrenia	20838587	CNVD
Glioblastoma	18772890	CNVD
Glioblastoma multiforme	21390271	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Acute myeloid leukemia	21251322	CNVD
Chordoma	21215367	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:296 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:9025400-9027200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr9:9033000-9033200	Enhancers	Ovary	ovary
3	chr9:9034400-9035000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr9:9034800-9035200	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr9:9035000-9035200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr9:9035000-9035200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
7	chr9:9035000-9035800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr9:9035000-9035800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr9:9035200-9035600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr9:9035200-9035800	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr9:9035200-9036800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr9:9035400-9035800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr9:9035600-9035800	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr9:9035600-9035800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr9:9035800-9037200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr9:9035800-9041800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr9:9036800-9037000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr9:9036800-9037200	Active TSS	Aorta	Aorta
19	chr9:9037400-9037600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr9:9040200-9041000	Enhancers	Fetal Brain Male	brain
21	chr9:9041400-9042400	Enhancers	Fetal Stomach	stomach
22	chr9:9041600-9041800	Enhancers	Fetal Kidney	kidney
23	chr9:9041800-9045000	Weak transcription	Fetal Kidney	kidney
24	chr9:9042400-9044400	Weak transcription	Fetal Stomach	stomach
25	chr9:9044400-9044600	Enhancers	Fetal Stomach	stomach
26	chr9:9044600-9045000	Weak transcription	Fetal Stomach	stomach
27	chr9:9045000-9045600	Enhancers	Fetal Kidney	kidney
28	chr9:9045000-9045600	Enhancers	Fetal Stomach	stomach
29	chr9:9045000-9046000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr9:9045000-9046000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr9:9045200-9045800	Enhancers	Brain Germinal Matrix	brain
32	chr9:9045200-9046000	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr9:9045400-9045800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr9:9045400-9045800	Enhancers	Brain Hippocampus Middle	brain
35	chr9:9045400-9045800	Enhancers	Fetal Lung	lung
36	chr9:9054400-9055400	Enhancers	Liver	Liver
37	chr9:9061800-9062200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr9:9064600-9065400	Enhancers	Fetal Heart	heart
39	chr9:9069400-9070000	Enhancers	Fetal Kidney	kidney
40	chr9:9069400-9070200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr9:9069600-9070200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
42	chr9:9077600-9080200	Enhancers	Fetal Heart	heart
43	chr9:9086400-9087000	Enhancers	Brain Inferior Temporal Lobe	brain
44	chr9:9096800-9097200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr9:9096800-9097400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr9:9096800-9097400	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr9:9096800-9097400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
48	chr9:9097000-9097200	Enhancers	Fetal Brain Female	brain
49	chr9:9097000-9097400	Enhancers	HUES6 Cell Line	embryonic stem cell
50	chr9:9097000-9097400	Enhancers	iPS-18 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links