Variant report

Variant	nsv892316
Chromosome Location	chr9:10348091-10555358
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:10434055-10434089	HepG2	liver:	n/a	n/a
2	ATF1	chr9:10397745-10397834	K562	blood:	n/a	n/a
3	CEBPB	chr9:10447962-10448204	H1-hESC	embryonic stem cell:	n/a	chr9:10448100-10448111
4	CEBPB	chr9:10366571-10366826	A549	lung:	n/a	chr9:10366647-10366658 chr9:10366646-10366657
5	CEBPB	chr9:10512172-10512513	A549	lung:	n/a	chr9:10512340-10512351 chr9:10512339-10512352 chr9:10512339-10512352
6	CEBPB	chr9:10425949-10426276	IMR90	lung:	n/a	chr9:10426091-10426102 chr9:10426090-10426103
7	CEBPB	chr9:10366538-10366836	HepG2	liver:	n/a	chr9:10366647-10366658 chr9:10366646-10366657
8	CEBPB	chr9:10512220-10512514	H1-hESC	embryonic stem cell:	n/a	chr9:10512340-10512351 chr9:10512339-10512352 chr9:10512339-10512352
9	CEBPB	chr9:10523193-10523241	HepG2	liver:	n/a	chr9:10523228-10523239 chr9:10523226-10523237 chr9:10523226-10523239 chr9:10523228-10523239 chr9:10523226-10523239
10	CEBPB	chr9:10425961-10426226	A549	lung:	n/a	chr9:10426091-10426102 chr9:10426090-10426103
11	CEBPB	chr9:10512160-10512530	IMR90	lung:	n/a	chr9:10512340-10512351 chr9:10512339-10512352 chr9:10512339-10512352
12	CEBPB	chr9:10455088-10455277	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr9:10512167-10512523	HepG2	liver:	n/a	chr9:10512340-10512351 chr9:10512339-10512352 chr9:10512339-10512352
14	CEBPB	chr9:10393484-10393639	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr9:10425961-10426264	HepG2	liver:	n/a	chr9:10426091-10426102 chr9:10426090-10426103
16	CEBPB	chr9:10447965-10448279	HepG2	liver:	n/a	chr9:10448100-10448111
17	CEBPB	chr9:10464897-10465142	IMR90	lung:	n/a	n/a
18	CEBPB	chr9:10555246-10555567	IMR90	lung:	n/a	chr9:10555408-10555417 chr9:10555406-10555417
19	CEBPB	chr9:10502012-10502198	HepG2	liver:	n/a	chr9:10502076-10502087
20	CEBPB	chr9:10448014-10448202	K562	blood:	n/a	chr9:10448100-10448111
21	CEBPB	chr9:10387659-10387714	HepG2	liver:	n/a	n/a
22	CEBPB	chr9:10512234-10512477	K562	blood:	n/a	chr9:10512340-10512351 chr9:10512339-10512352 chr9:10512339-10512352
23	CEBPB	chr9:10433949-10434113	HepG2	liver:	n/a	chr9:10434019-10434032 chr9:10434019-10434032 chr9:10434020-10434031
24	CEBPB	chr9:10504394-10504660	A549	lung:	n/a	chr9:10504502-10504514
25	CEBPB	chr9:10555251-10555579	HepG2	liver:	n/a	chr9:10555408-10555417 chr9:10555406-10555417
26	CTCF	chr9:10479213-10479575	H1-hESC	embryonic stem cell:	n/a	chr9:10479399-10479408
27	CTCF	chr9:10479320-10479470	Hela-S3	cervix:	n/a	chr9:10479399-10479408
28	CTCF	chr9:10366280-10366430	GM12869	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
29	CTCF	chr9:10479359-10479442	Medullo	brain:	n/a	chr9:10479399-10479408
30	CTCF	chr9:10479280-10479430	HCPEpiC	choroid plexus:	n/a	chr9:10479399-10479408
31	CTCF	chr9:10366320-10366470	GM12872	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
32	CTCF	chr9:10479280-10479430	HEEpiC	esophagus:	n/a	chr9:10479399-10479408
33	CTCF	chr9:10366300-10366450	GM06990	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
34	CTCF	chr9:10366192-10366552	K562	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
35	CTCF	chr9:10366260-10366410	Caco-2	colon:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
36	CTCF	chr9:10366066-10366648	A549	lung:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
37	CTCF	chr9:10366300-10366450	HRPEpiC	eye:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
38	CTCF	chr9:10479260-10479410	NHEK	skin:	n/a	chr9:10479399-10479408
39	CTCF	chr9:10366335-10366424	MCF-7	breast:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
40	CTCF	chr9:10366280-10366430	HepG2	liver:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
41	CTCF	chr9:10366337-10366463	A549	lung:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
42	CTCF	chr9:10366320-10366470	GM12864	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
43	CTCF	chr9:10366280-10366430	GM12874	blood:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
44	CTCF	chr9:10366280-10366430	HEK293	kidney:	n/a	chr9:10366367-10366388 chr9:10366365-10366383
45	CTCF	chr9:10479360-10479510	SAEC	small airway:	n/a	chr9:10479399-10479408
46	CTCF	chr9:10479320-10479470	HMF	breast:	n/a	chr9:10479399-10479408
47	CTCF	chr9:10479280-10479430	GM12871	blood:	n/a	chr9:10479399-10479408
48	CTCF	chr9:10479240-10479390	A549	lung:	n/a	n/a
49	CTCF	chr9:10479300-10479450	Caco-2	colon:	n/a	chr9:10479399-10479408
50	CTCF	chr9:10479300-10479450	HA-sp	spinal cord:	n/a	chr9:10479399-10479408

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:10371306-10371356	GM06990	blood:	n/a
2	chr9:10371306-10371356	MCF-7	breast:	n/a
3	chr9:10371306-10371356	HCM	heart:	n/a
4	chr9:10371306-10371356	GM19239	blood:	n/a
5	chr9:10371306-10371356	LNCaP	prostate:	n/a
6	chr9:10371306-10371356	Caco-2	colon:	n/a
7	chr9:10371306-10371356	GM12878	blood:	n/a
8	chr9:10371306-10371356	HCPEpiC	choroid plexus:	n/a
9	chr9:10371306-10371356	GM12891	blood:	n/a
10	chr9:10371306-10371356	T-47D	breast:	n/a
11	chr9:10371306-10371356	HAEpiC	amniotic membrane:	n/a
12	chr9:10371306-10371356	NHDF-neo	bronchial:	n/a
13	chr9:10371306-10371356	HMEC	breast:	n/a
14	chr9:10371306-10371356	SKMC	muscle:	n/a
15	chr9:10371306-10371356	BE2_C	brain:	n/a
16	chr9:10371306-10371356	HRE	kidney:	n/a
17	chr9:10371306-10371356	NB4	blood:	n/a
18	chr9:10371306-10371356	Hela-S3	cervix:	n/a
19	chr9:10371306-10371356	HIPEpiC	eye:	n/a
20	chr9:10371306-10371356	ECC-1	luminal epithelium:	n/a
21	chr9:10371306-10371356	AG04449	skin:	fetal
22	chr9:10371306-10371356	HCF	heart:	n/a
23	chr9:10371306-10371356	GM12892	blood:	n/a
24	chr9:10371306-10371356	AG09319	gingival:	n/a
25	chr9:10371306-10371356	AG09309	skin:	n/a
26	chr9:10371306-10371356	Hepatocyte	liver:	n/a
27	chr9:10371306-10371356	AG10803	skin:	n/a
28	chr9:10371306-10371356	SAEC	small airway:	n/a
29	chr9:10371306-10371356	HCT-116	colon:	n/a
30	chr9:10371306-10371356	IMR90	lung:	fetal
31	chr9:10371306-10371356	SK-N-SH_RA	brain:	n/a
32	chr9:10371306-10371356	CMK	blood:	n/a
33	chr9:10371306-10371356	NT2-D1	testis:	n/a
34	chr9:10371306-10371356	ovcar-3	ovarian:	n/a
35	chr9:10371306-10371356	SK-N-MC	brain:	n/a
36	chr9:10371306-10371356	SK-N-SH	brain:	n/a
37	chr9:10371306-10371356	H1-hESC	embryonic stem cell:	embryo
38	chr9:10371306-10371356	HL-60	blood:	n/a
39	chr9:10371306-10371356	U87	brain:	n/a
40	chr9:10371306-10371356	AoSMC	blood vessel:	n/a
41	chr9:10371306-10371356	RPTEC	kidney:	n/a
42	chr9:10371306-10371356	HEEpiC	esophagus:	n/a
43	chr9:10371306-10371356	HRPEpiC	eye:	n/a
44	chr9:10371306-10371356	HNPCEpiC	eye:	n/a
45	chr9:10371306-10371356	HRCEpiC	kidney:	n/a
46	chr9:10371306-10371356	PANC-1	pancreas:	n/a
47	chr9:10371306-10371356	HUVEC	blood vessel:	n/a
48	chr9:10371306-10371356	ProgFib	skin:	n/a
49	chr9:10371306-10371356	Jurkat	blood:	n/a
50	chr9:10371306-10371356	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:10455080..10457059-chr9:10458329..10460552,2	MCF-7	breast:
2	chr9:10455080..10457059-chr9:10458329..10460552,2	MCF-7	breast:
3	chr9:10365979..10366914-chr9:12329143..12329893,2	MCF-7	breast:
4	chr9:10366359..10367238-chr9:11319480..11320059,2	MCF-7	breast:
5	chr2:145089819..145090468-chr9:10441934..10442434,2	NB4	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TYRP1-5	chr9:10532145-10532411	NONHSAT130199

Variant related genes	Relation type
ENSG00000234360	TF binding region
ENSG00000234360	CpG island
ENSG00000121964	chromatin interactions

Extended variants
information (count: 2713 )
Associated
traits (count: 121 )

Variant overlapped rSNPs/rCNVs (count:2713 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs553185926	chr9:10349236-10349237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs573171056	chr9:10349262-10349263	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs555955064	chr9:10349267-10349268	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs139796607	chr9:10349312-10349313	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs558767313	chr9:10349336-10349337	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs372187419	chr9:10349337-10349338	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs575536642	chr9:10349351-10349352	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs544662554	chr9:10349415-10349416	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs561238947	chr9:10349425-10349426	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs574731065	chr9:10349431-10349432	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs540267595	chr9:10349442-10349443	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs560156659	chr9:10349448-10349449	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs143548615	chr9:10349449-10349450	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs546117096	chr9:10349495-10349496	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs562715413	chr9:10349498-10349499	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs531803724	chr9:10349514-10349515	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs386732537	chr9:10349534-10349535	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs12342062	chr9:10349536-10349537	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs146312006	chr9:10349564-10349565	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs182116563	chr9:10349581-10349582	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs566508102	chr9:10349592-10349593	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs571829129	chr9:10351810-10351811	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs1924083	chr9:10351875-10351876	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs1323492	chr9:10351898-10351899	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs186584764	chr9:10351929-10351930	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs541593633	chr9:10351947-10351948	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs1323491	chr9:10351990-10351991	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs148320162	chr9:10351994-10351995	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs570786536	chr9:10351997-10351998	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs540891665	chr9:10352006-10352007	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs564047195	chr9:10352037-10352038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs142066739	chr9:10352089-10352090	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs192513355	chr9:10352091-10352092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs563373482	chr9:10352115-10352116	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs529368583	chr9:10352131-10352132	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs549234949	chr9:10352159-10352160	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs1323490	chr9:10352183-10352184	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs183234593	chr9:10352188-10352189	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs373399087	chr9:10352226-10352227	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs34748049	chr9:10352232-10352233	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs571967597	chr9:10352242-10352243	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs542510459	chr9:10352257-10352258	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs557513777	chr9:10352273-10352274	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs187815981	chr9:10352275-10352276	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs35569974	chr9:10352277-10352278	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs553360326	chr9:10352327-10352328	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs535504978	chr9:10352329-10352330	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs192918996	chr9:10352437-10352438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs571663522	chr9:10352440-10352441	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs74756894	chr9:10352460-10352461	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:121)

Disease	PMID	Source
abnormal development	18461090	CNVD
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Lung cancer	20668451	CNVD
Schizophrenia	20838587	CNVD
Glioblastoma	18772890	CNVD
Glioblastoma multiforme	21390271	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Acute myeloid leukemia	21251322	CNVD
Lung adenocarcinoma	17982442	CNVD
Breast cancer	21611746	CNVD
Melanoma	22183965	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Barrett''s syndrome	19417022	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:10349200-10349600	Enhancers	Fetal Brain Male	brain
2	chr9:10351800-10352600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr9:10356600-10357800	Enhancers	Brain Germinal Matrix	brain
4	chr9:10357200-10357600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr9:10357200-10358000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr9:10357400-10357800	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr9:10357400-10358200	Enhancers	Fetal Brain Female	brain
8	chr9:10357600-10358000	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr9:10357800-10360200	Weak transcription	Brain Germinal Matrix	brain
10	chr9:10360200-10360600	Enhancers	Brain Germinal Matrix	brain
11	chr9:10360600-10364800	Weak transcription	Brain Germinal Matrix	brain
12	chr9:10364800-10365200	Enhancers	Brain Germinal Matrix	brain
13	chr9:10365200-10369600	Weak transcription	Brain Germinal Matrix	brain
14	chr9:10366000-10366400	Enhancers	Fetal Brain Male	brain
15	chr9:10369600-10370200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr9:10369600-10370200	Enhancers	Brain Germinal Matrix	brain
17	chr9:10370200-10371800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr9:10371200-10371400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr9:10371400-10372000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr9:10371400-10372600	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr9:10371600-10372000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr9:10371600-10372200	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr9:10371600-10372600	Enhancers	iPS-18 Cell Line	embryonic stem cell
24	chr9:10371600-10372600	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr9:10371800-10372600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr9:10371800-10372600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr9:10371800-10372600	Enhancers	HUES6 Cell Line	embryonic stem cell
28	chr9:10371800-10372600	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr9:10371800-10372800	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr9:10372000-10372800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
31	chr9:10372200-10372600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr9:10372200-10372600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
33	chr9:10373600-10374000	Enhancers	Pancreatic Islets	Pancreatic Islet
34	chr9:10376000-10376200	Enhancers	Pancreatic Islets	Pancreatic Islet
35	chr9:10384800-10385200	Enhancers	HUES48 Cell Line	embryonic stem cell
36	chr9:10385000-10385200	Enhancers	iPS-18 Cell Line	embryonic stem cell
37	chr9:10385200-10387200	Weak transcription	HUES48 Cell Line	embryonic stem cell
38	chr9:10387200-10387600	Enhancers	HUES6 Cell Line	embryonic stem cell
39	chr9:10387200-10387600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr9:10387200-10387800	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr9:10387200-10387800	Enhancers	iPS-18 Cell Line	embryonic stem cell
42	chr9:10387400-10387800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr9:10387800-10395800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr9:10395800-10396000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr9:10395800-10396200	Active TSS	Breast Myoepithelial Primary Cells	Breast
46	chr9:10396000-10397200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr9:10396600-10397000	Enhancers	iPS-18 Cell Line	embryonic stem cell
48	chr9:10397200-10397400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr9:10397200-10398000	Enhancers	Pancreatic Islets	Pancreatic Islet
50	chr9:10398800-10399200	Enhancers	Fetal Heart	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links