Variant report

Variant nsv892339
Chromosome Location chr9:11187028-11394278
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:11194000-11194600 Enhancers Fetal Brain Male brain
2 chr9:11194200-11194400 Enhancers Brain Germinal Matrix brain
3 chr9:11194200-11195000 Enhancers Fetal Brain Female brain
4 chr9:11194400-11195200 Weak transcription Brain Germinal Matrix brain
5 chr9:11195200-11196200 Enhancers Brain Germinal Matrix brain
6 chr9:11196000-11196800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr9:11196800-11197200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
8 chr9:11197200-11203000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr9:11199000-11199800 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr9:11199200-11199800 Enhancers HUES6 Cell Line embryonic stem cell
11 chr9:11199200-11199800 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr9:11199200-11200400 Enhancers iPS-18 Cell Line embryonic stem cell
13 chr9:11199400-11199800 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr9:11199600-11200400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr9:11207600-11207800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
16 chr9:11233800-11235200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:11234600-11235800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr9:11254200-11254800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
19 chr9:11257400-11258600 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr9:11257600-11258000 Enhancers Fetal Heart heart
21 chr9:11258000-11258400 Flanking Active TSS Fetal Heart heart
22 chr9:11258200-11258600 Enhancers Placenta Amnion Placenta Amnion
23 chr9:11258200-11258800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr9:11258200-11258800 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr9:11258400-11259000 Enhancers Fetal Heart heart
26 chr9:11258800-11259800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr9:11259200-11260200 Enhancers HUES6 Cell Line embryonic stem cell
28 chr9:11259400-11259800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr9:11259800-11260000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr9:11268800-11269600 ZNF genes & repeats Adipose Nuclei Adipose
31 chr9:11280400-11281000 Enhancers Pancreatic Islets Pancreatic Islet
32 chr9:11280600-11281000 Enhancers Fetal Brain Female brain
33 chr9:11280800-11281200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr9:11295400-11297000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr9:11296400-11296600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
36 chr9:11296600-11300800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr9:11297000-11297400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
38 chr9:11300800-11301000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
39 chr9:11312800-11313600 Enhancers Cortex derived primary cultured neurospheres brain
40 chr9:11312800-11313600 Enhancers Brain Hippocampus Middle brain
41 chr9:11313000-11313400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr9:11313000-11313400 Enhancers Brain Cingulate Gyrus brain
43 chr9:11313000-11313600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr9:11313000-11313600 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr9:11313000-11313800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr9:11313600-11314600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr9:11318000-11321800 Enhancers Fetal Brain Male brain
48 chr9:11318200-11319200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr9:11318200-11319800 Enhancers Fetal Brain Female brain
50 chr9:11318800-11320000 Enhancers Pancreatic Islets Pancreatic Islet

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