Variant report

Variant	nsv892738
Chromosome Location	chr9:21371264-21413085
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:750)
CpG islands
(count:306)
Chromatin interactive
region (count:2)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:750 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:21382111-21382396	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:21396319-21396369	HepG2	liver:	n/a	n/a
3	ATF2	chr9:21381554-21382273	GM12878	blood:	n/a	n/a
4	ATF2	chr9:21381480-21382315	GM12878	blood:	n/a	n/a
5	BACH1	chr9:21396047-21396543	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr9:21381702-21382092	GM12878	blood:	n/a	n/a
7	BATF	chr9:21381625-21382187	GM12878	blood:	n/a	n/a
8	BCL11A	chr9:21381656-21382167	GM12878	blood:	n/a	chr9:21381986-21381995
9	BCL11A	chr9:21381619-21382272	GM12878	blood:	n/a	chr9:21381986-21381995
10	BCL3	chr9:21381640-21382241	GM12878	blood:	n/a	chr9:21381986-21381995
11	BCLAF1	chr9:21381621-21382291	GM12878	blood:	n/a	chr9:21381986-21381995
12	BCLAF1	chr9:21396108-21396541	GM12878	blood:	n/a	n/a
13	BCLAF1	chr9:21381612-21382254	GM12878	blood:	n/a	chr9:21381986-21381995
14	BHLHE40	chr9:21396259-21396485	A549	lung:	n/a	n/a
15	BHLHE40	chr9:21404025-21404312	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:21395908-21396562	GM12878	blood:	n/a	n/a
17	BHLHE40	chr9:21396169-21396483	HepG2	liver:	n/a	n/a
18	BHLHE40	chr9:21382053-21382377	HepG2	liver:	n/a	n/a
19	BHLHE40	chr9:21381496-21382354	GM12878	blood:	n/a	n/a
20	BRCA1	chr9:21396110-21396494	H1-hESC	embryonic stem cell:	n/a	n/a
21	BRCA1	chr9:21396248-21396483	GM12878	blood:	n/a	n/a
22	CEBPB	chr9:21408084-21408246	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr9:21372342-21372396	A549	lung:	n/a	n/a
24	CEBPB	chr9:21396167-21396488	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD1	chr9:21396196-21396383	GM12878	blood:	n/a	n/a
26	CHD2	chr9:21395990-21396537	GM12878	blood:	n/a	chr9:21396107-21396117
27	CHD2	chr9:21381529-21382364	GM12878	blood:	n/a	n/a
28	CREB1	chr9:21381605-21382275	GM12878	blood:	n/a	n/a
29	CREB1	chr9:21381528-21382321	GM12878	blood:	n/a	n/a
30	CTCF	chr9:21402960-21403110	GM12872	blood:	n/a	n/a
31	CTCF	chr9:21396200-21396350	HBMEC	blood vessel:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
32	CTCF	chr9:21392300-21392450	RPTEC	kidney:	n/a	chr9:21392426-21392434
33	CTCF	chr9:21392340-21392490	AG09319	gingival:	n/a	chr9:21392426-21392434
34	CTCF	chr9:21396260-21396410	NHDF-neo	bronchial:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
35	CTCF	chr9:21396240-21396390	HA-sp	spinal cord:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
36	CTCF	chr9:21391980-21392130	HRPEpiC	eye:	n/a	n/a
37	CTCF	chr9:21392360-21392510	SK-N-SH_RA	brain:	n/a	chr9:21392426-21392434
38	CTCF	chr9:21396220-21396370	AoAF	blood vessel:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
39	CTCF	chr9:21396166-21396463	GM10248	blood:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
40	CTCF	chr9:21396240-21396390	HCPEpiC	choroid plexus:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
41	CTCF	chr9:21378654-21378745	Hela-S3	cervix:	n/a	n/a
42	CTCF	chr9:21392400-21392550	AG04450	lung:	n/a	chr9:21392426-21392434
43	CTCF	chr9:21402860-21403010	NHDF-neo	bronchial:	n/a	n/a
44	CTCF	chr9:21396120-21396270	HCM	heart:	n/a	n/a
45	CTCF	chr9:21392380-21392530	SAEC	small airway:	n/a	chr9:21392426-21392434
46	CTCF	chr9:21396211-21396420	Hela-S3	cervix:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
47	CTCF	chr9:21392400-21392550	MCF-7	breast:	n/a	chr9:21392426-21392434
48	CTCF	chr9:21402940-21403090	GM12868	blood:	n/a	n/a
49	CTCF	chr9:21396260-21396410	GM12864	blood:	n/a	chr9:21396301-21396317 chr9:21396300-21396318
50	CTCF	chr9:21395780-21395930	HMEC	breast:	n/a	n/a

(count:306 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:21396078-21396128	HepG2	liver:	n/a
2	chr9:21396078-21396128	HepG2	liver:	n/a
3	chr9:21393116-21393166	PFSK-1	brain:	n/a
4	chr9:21396119-21396169	GM12891	blood:	n/a
5	chr9:21393116-21393166	HRCEpiC	kidney:	n/a
6	chr9:21396078-21396128	SK-N-MC	brain:	n/a
7	chr9:21396119-21396169	AG04449	skin:	fetal
8	chr9:21409505-21409555	NHBE	bronchial:	n/a
9	chr9:21396119-21396169	K562	blood:	n/a
10	chr9:21396078-21396128	BE2_C	brain:	n/a
11	chr9:21396119-21396169	AG09309	skin:	n/a
12	chr9:21396119-21396169	HNPCEpiC	eye:	n/a
13	chr9:21409505-21409555	HRE	kidney:	n/a
14	chr9:21393116-21393166	MCF-7	breast:	n/a
15	chr9:21396107-21396157	AG04450	lung:	fetal
16	chr9:21396119-21396169	HRE	kidney:	n/a
17	chr9:21409505-21409555	SAEC	small airway:	n/a
18	chr9:21396078-21396128	NHBE	bronchial:	n/a
19	chr9:21393116-21393166	BE2_C	brain:	n/a
20	chr9:21409505-21409555	HUVEC	blood vessel:	n/a
21	chr9:21396107-21396157	SKMC	muscle:	n/a
22	chr9:21396107-21396157	HCPEpiC	choroid plexus:	n/a
23	chr9:21396078-21396128	HCM	heart:	n/a
24	chr9:21393116-21393166	HCPEpiC	choroid plexus:	n/a
25	chr9:21396119-21396169	U87	brain:	n/a
26	chr9:21396107-21396157	AG09309	skin:	n/a
27	chr9:21396119-21396169	NH-A	brain:	n/a
28	chr9:21409505-21409555	Jurkat	blood:	n/a
29	chr9:21393116-21393166	HRE	kidney:	n/a
30	chr9:21393116-21393166	HCM	heart:	n/a
31	chr9:21396107-21396157	GM12892	blood:	n/a
32	chr9:21396078-21396128	PANC-1	pancreas:	n/a
33	chr9:21409505-21409555	GM12891	blood:	n/a
34	chr9:21409505-21409555	BJ	skin:	n/a
35	chr9:21396078-21396128	U87	brain:	n/a
36	chr9:21396078-21396128	HCF	heart:	n/a
37	chr9:21409505-21409555	NT2-D1	testis:	n/a
38	chr9:21409505-21409555	T-47D	breast:	n/a
39	chr9:21396107-21396157	GM12891	blood:	n/a
40	chr9:21396078-21396128	NT2-D1	testis:	n/a
41	chr9:21396107-21396157	HIPEpiC	eye:	n/a
42	chr9:21396119-21396169	PrEC	prostate:	n/a
43	chr9:21396119-21396169	AG04450	lung:	fetal
44	chr9:21393116-21393166	LNCaP	prostate:	n/a
45	chr9:21393116-21393166	SK-N-SH	brain:	n/a
46	chr9:21396119-21396169	HRCEpiC	kidney:	n/a
47	chr9:21393116-21393166	AG09319	gingival:	n/a
48	chr9:21396119-21396169	BE2_C	brain:	n/a
49	chr9:21396078-21396128	SK-N-SH	brain:	n/a
50	chr9:21409505-21409555	HEK293	kidney:	embryo

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:56707046..56709120-chr9:21394171..21396091,2	MCF-7	breast:
2	chr9:21332702..21335919-chr9:21391741..21394424,4	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IFNA2-1	chr9:21394887-21396345	ENSG00000261696.1
2	lnc-IFNA8-1	chr9:21403080-21403650	NONHSAT130383
3	lnc-IFNA2-2	chr9:21398613-21399138	NONHSAT130382

No data

Variant related genes	Relation type
IFNA13	TF binding region
ENSG00000261696	TF binding region
IFNA12P	TF binding region
IFNA2	TF binding region
IFNA11P	TF binding region
IFNA8	TF binding region
IFNA13	CpG island
ENSG00000261696	CpG island
IFNA12P	CpG island
IFNA2	CpG island
IFNA11P	CpG island
IFNA8	CpG island
ENSG00000198642	chromatin interactions

Extended variants
information (count: 1189 )
Associated
traits (count: 154 )

Variant overlapped rSNPs/rCNVs (count:1189 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs547369139	chr9:21371536-21371537	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs183906703	chr9:21371567-21371568	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs374546250	chr9:21371574-21371575	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs374530538	chr9:21371647-21371648	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs541857122	chr9:21371658-21371659	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs561825605	chr9:21371669-21371670	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs536509948	chr9:21371679-21371680	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs188690046	chr9:21371689-21371690	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs576985657	chr9:21372346-21372347	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs79726381	chr9:21372357-21372358	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs10124539	chr9:21372374-21372375	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs56292732	chr9:21372381-21372382	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs561730392	chr9:21378814-21378815	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs150329518	chr9:21378834-21378835	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs72701336	chr9:21378869-21378870	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs543894232	chr9:21378892-21378893	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs188092468	chr9:21378916-21378917	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs77764941	chr9:21378921-21378922	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs546812945	chr9:21378991-21378992	Bivalent Enhancer Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs560588770	chr9:21379020-21379021	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
21	rs75733155	chr9:21379112-21379113	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
22	rs75381499	chr9:21379116-21379117	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
23	rs138041340	chr9:21379169-21379170	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
24	rs192662144	chr9:21379182-21379183	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
25	rs374009526	chr9:21379308-21379309	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
26	rs184407794	chr9:21379342-21379343	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
27	rs564064851	chr9:21379414-21379415	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs187705362	chr9:21379420-21379421	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs530782028	chr9:21379425-21379426	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs192553580	chr9:21379430-21379431	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs4142399	chr9:21379466-21379467	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs185079330	chr9:21379468-21379469	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs79285632	chr9:21379491-21379492	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs535739745	chr9:21379584-21379585	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs570594027	chr9:21379590-21379591	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs577751061	chr9:21379593-21379594	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs528252126	chr9:21379599-21379600	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs547105145	chr9:21379635-21379636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs189069572	chr9:21379650-21379651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs574878649	chr9:21379679-21379680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs543834080	chr9:21379681-21379682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs143616021	chr9:21379771-21379772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs369307528	chr9:21379789-21379790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs181848495	chr9:21379826-21379827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs79464813	chr9:21379832-21379833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560740985	chr9:21379840-21379841	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs529508961	chr9:21379874-21379875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs147203963	chr9:21379875-21379876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs563070785	chr9:21379876-21379877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs531713523	chr9:21379899-21379900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:154)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Glioblastoma multiforme	21569311	CNVD
Myelofibrosis	22110671	CNVD
Ewing''s sarcoma	22429812	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	19435819	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung cancer	21911935	CNVD
Primary central nervous system lymphoma	21088137	CNVD
head and neck squamous cell carcinoma	21798897	CNVD
Cancer	21253487	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Leukemia	19602459	CNVD
Acute monocytic leukemia	16498392	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Leukemia	18688285	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Glioma	20126413	CNVD
Melanoma	17363583	CNVD
Glioblastoma multiforme	19115005	CNVD
Glioblastoma multiforme	21525872	CNVD
Glioblastoma multiforme	21138945	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Cancer	20581869	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Oral cancer	22144094	CNVD
Lung cancer	21569311	CNVD
Epilepsy	20502679	CNVD
Barrett''s syndrome	19417022	CNVD
Pancreatic cancer	21811587	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:679 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21378800-21379000	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
2	chr9:21378800-21379200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr9:21378800-21379400	Enhancers	GM12878-XiMat	blood
4	chr9:21379000-21379400	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
5	chr9:21379200-21381000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr9:21379400-21379600	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr9:21379400-21380400	Weak transcription	GM12878-XiMat	blood
8	chr9:21380400-21380800	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
9	chr9:21380400-21381400	Enhancers	GM12878-XiMat	blood
10	chr9:21380400-21382600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
11	chr9:21381000-21381400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr9:21381000-21381400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr9:21381000-21382600	Enhancers	Primary B cells from cord blood	blood
14	chr9:21381200-21381400	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr9:21381200-21381600	Enhancers	Primary hematopoietic stem cells	blood
16	chr9:21381400-21381600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
17	chr9:21381400-21381600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
18	chr9:21381400-21381600	Enhancers	Duodenum Mucosa	Duodenum
19	chr9:21381400-21381800	Bivalent Enhancer	Brain Anterior Caudate	brain
20	chr9:21381400-21381800	Flanking Active TSS	GM12878-XiMat	blood
21	chr9:21381400-21382000	Enhancers	Primary neutrophils fromperipheralblood	blood
22	chr9:21381400-21382000	Active TSS	Rectal Mucosa Donor 29	rectum
23	chr9:21381400-21382000	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
24	chr9:21381400-21382200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
25	chr9:21381400-21382200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr9:21381400-21382200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr9:21381400-21382200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr9:21381400-21382400	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr9:21381400-21382400	Enhancers	iPS-20b Cell Line	embryonic stem cell
30	chr9:21381400-21382400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr9:21381400-21382400	Enhancers	Primary B cells from peripheral blood	blood
32	chr9:21381400-21382400	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
33	chr9:21381400-21382400	Enhancers	Placenta	Placenta
34	chr9:21381400-21382600	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr9:21381400-21382600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
36	chr9:21381400-21382600	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
37	chr9:21381400-21382800	Enhancers	iPS-18 Cell Line	embryonic stem cell
38	chr9:21381400-21383000	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr9:21381400-21386000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr9:21381600-21381800	Enhancers	Primary hematopoietic stem cells short term culture	blood
41	chr9:21381600-21381800	Flanking Active TSS	Ovary	ovary
42	chr9:21381600-21381800	Bivalent Enhancer	Dnd41	blood
43	chr9:21381600-21382000	Flanking Active TSS	Primary hematopoietic stem cells	blood
44	chr9:21381600-21382000	Flanking Active TSS	Duodenum Mucosa	Duodenum
45	chr9:21381600-21382200	Enhancers	H1 Cell Line	embryonic stem cell
46	chr9:21381600-21382200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr9:21381600-21382200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
48	chr9:21381600-21382200	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
49	chr9:21381600-21382200	Enhancers	Hela-S3	cervix
50	chr9:21381600-21382400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links