Variant report
Variant | nsv892740 |
---|---|
Chromosome Location | chr9:21471499-21551513 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:882)
- CpG islands (count:0)
- Chromatin interactive region (count:6)
- LncRNA region (count:10)
- Mature miRNA region (count: 2)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BCL3 | chr9:21508689-21509632 | A549 | lung: | n/a | n/a |
2 | BCL3 | chr9:21500520-21501100 | A549 | lung: | n/a | n/a |
3 | BCL3 | chr9:21501977-21502583 | A549 | lung: | n/a | n/a |
4 | BCL3 | chr9:21499752-21501285 | A549 | lung: | n/a | n/a |
5 | BCL3 | chr9:21519608-21520690 | A549 | lung: | n/a | chr9:21519928-21519937 |
6 | BCL3 | chr9:21498490-21499615 | A549 | lung: | n/a | n/a |
7 | BCL3 | chr9:21548899-21550745 | A549 | lung: | n/a | n/a |
8 | BCL3 | chr9:21499921-21500395 | A549 | lung: | n/a | n/a |
9 | BCL3 | chr9:21506616-21507704 | A549 | lung: | n/a | n/a |
10 | BCL3 | chr9:21501331-21508410 | A549 | lung: | n/a | chr9:21506204-21506213 |
11 | BCL3 | chr9:21549187-21550089 | A549 | lung: | n/a | n/a |
12 | BCL3 | chr9:21503475-21506429 | A549 | lung: | n/a | chr9:21506204-21506213 |
13 | BRCA1 | chr9:21548988-21549868 | Hela-S3 | cervix: | n/a | n/a |
14 | BRCA1 | chr9:21548534-21548634 | Hela-S3 | cervix: | n/a | n/a |
15 | CBX3 | chr9:21520811-21522028 | HCT-116 | colon: | n/a | n/a |
16 | CBX3 | chr9:21526174-21527163 | HCT-116 | colon: | n/a | n/a |
17 | CBX3 | chr9:21519763-21526025 | HCT-116 | colon: | n/a | n/a |
18 | CBX3 | chr9:21522147-21524471 | HCT-116 | colon: | n/a | n/a |
19 | CEBPB | chr9:21506792-21507249 | IMR90 | lung: | n/a | n/a |
20 | CEBPB | chr9:21549314-21550172 | A549 | lung: | n/a | chr9:21549692-21549703 |
21 | CEBPB | chr9:21519556-21521968 | HCT-116 | colon: | n/a | n/a |
22 | CEBPB | chr9:21549112-21550105 | A549 | lung: | n/a | chr9:21549276-21549287 chr9:21549692-21549703 |
23 | CEBPB | chr9:21549163-21550161 | HCT-116 | colon: | n/a | chr9:21549276-21549287 chr9:21549692-21549703 |
24 | CEBPB | chr9:21495278-21495540 | IMR90 | lung: | n/a | n/a |
25 | CEBPB | chr9:21549459-21550071 | A549 | lung: | n/a | chr9:21549692-21549703 |
26 | CEBPB | chr9:21493662-21493841 | A549 | lung: | n/a | n/a |
27 | CEBPB | chr9:21501197-21501480 | A549 | lung: | n/a | n/a |
28 | CEBPB | chr9:21549213-21550026 | IMR90 | lung: | n/a | chr9:21549276-21549287 chr9:21549692-21549703 |
29 | CEBPB | chr9:21506492-21507694 | HCT-116 | colon: | n/a | chr9:21507245-21507257 |
30 | CEBPB | chr9:21551365-21551981 | A549 | lung: | n/a | n/a |
31 | CEBPB | chr9:21513524-21513835 | IMR90 | lung: | n/a | n/a |
32 | CEBPB | chr9:21519283-21525730 | HCT-116 | colon: | n/a | n/a |
33 | CEBPB | chr9:21495325-21495569 | A549 | lung: | n/a | n/a |
34 | CEBPB | chr9:21495286-21495543 | HepG2 | liver: | n/a | n/a |
35 | CEBPB | chr9:21549138-21550039 | Hela-S3 | cervix: | n/a | chr9:21549276-21549287 chr9:21549692-21549703 |
36 | CEBPB | chr9:21506801-21507249 | Hela-S3 | cervix: | n/a | n/a |
37 | CEBPB | chr9:21478670-21478870 | A549 | lung: | n/a | chr9:21478675-21478688 |
38 | CHD2 | chr9:21549127-21549911 | Hela-S3 | cervix: | n/a | n/a |
39 | CREB1 | chr9:21549503-21549856 | A549 | lung: | n/a | n/a |
40 | CREB1 | chr9:21549320-21549833 | A549 | lung: | n/a | n/a |
41 | CTCF | chr9:21527780-21527930 | SK-N-SH_RA | brain: | n/a | n/a |
42 | CTCF | chr9:21473340-21473490 | HPAF | blood vessel: | n/a | chr9:21473366-21473387 |
43 | CTCF | chr9:21527700-21527850 | HepG2 | liver: | n/a | n/a |
44 | CTCF | chr9:21549623-21549631 | Hela-S3 | cervix: | n/a | n/a |
45 | CTCF | chr9:21527771-21527883 | GM10248 | blood: | n/a | n/a |
46 | CTCF | chr9:21473280-21473430 | HRE | kidney: | n/a | chr9:21473366-21473387 |
47 | CTCF | chr9:21473300-21473450 | GM12871 | blood: | n/a | chr9:21473366-21473387 |
48 | CTCF | chr9:21527680-21527830 | GM12864 | blood: | n/a | n/a |
49 | CTCF | chr9:21473320-21473470 | HCM | heart: | n/a | chr9:21473366-21473387 |
50 | CTCF | chr9:21473340-21473490 | HVMF | connective: | n/a | chr9:21473366-21473387 |
No data |
(count:6 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:68668658..68669180-chr9:21520044..21520625,2 | HCT-116 | colon: | |
2 | chr9:21491433..21492444-chr9:21789127..21790263,7 | MCF-7 | breast: | |
3 | chr14:74955326..74955958-chr9:21530738..21531280,2 | HCT-116 | colon: | |
4 | chr9:21496297..21498448-chr9:21802383..21804700,2 | MCF-7 | breast: | |
5 | chr11:61583818..61584553-chr9:21518322..21519322,2 | HCT-116 | colon: | |
6 | chr9:21492643..21493283-chr9:21789425..21789929,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-IFNE-1 | chr9:21476898-21477034 | NONHSAT130385 |
2 | lnc-IFNE-1 | chr9:21477168-21477292 | NONHSAT130388 |
3 | lnc-IFNE-1 | chr9:21476873-21477034 | NONHSAT130389 |
4 | lnc-IFNE-1 | chr9:21476898-21477034 | NONHSAT130388 |
5 | lnc-IFNE-1 | chr9:21476898-21477034 | ENSG00000171889 |
6 | lnc-IFNE-1 | chr9:21476898-21477034 | NONHSAT130386 |
7 | lnc-IFNE-1 | chr9:21477168-21477291 | NONHSAT130385 |
8 | lnc-IFNE-1 | chr9:21477168-21477291 | NONHSAT130386 |
9 | lnc-IFNE-1 | chr9:21477168-21477292 | NONHSAT130389 |
10 | lnc-IFNE-1 | chr9:21477168-21477291 | ENSG00000171889 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-31-3p | chr9:21512120-21512141 | MIMAT0004504 |
hsa-miR-31-5p | chr9:21512157-21512177 | MIMAT0000089 |
No data |
Variant related genes | Relation type |
---|---|
MIR31 | TF binding region |
ENSG00000264379 | TF binding region |
IFNE | TF binding region |
ENSG00000264545 | chromatin interactions |
ENSG00000149485 | chromatin interactions |
ENSG00000134824 | chromatin interactions |
ENSG00000099810 | chromatin interactions |
RICTOR | Mature miRNA region |
NDFIP2 | Mature miRNA region |
MED12 | Mature miRNA region |
EXOSC5 | Mature miRNA region |
NFAT5 | Mature miRNA region |
ATP2A2 | Mature miRNA region |
FZD3 | Mature miRNA region |
ZC3H12C | Mature miRNA region |
TNKS2 | Mature miRNA region |
PCSK1N | Mature miRNA region |
MET | Mature miRNA region |
ACADVL | Mature miRNA region |
MMP16 | Mature miRNA region |
C1orf198 | Mature miRNA region |
DBR1 | Mature miRNA region |
CYP27B1 | Mature miRNA region |
TIAM1 | Mature miRNA region |
YY1 | Mature miRNA region |
DKK1 | Mature miRNA region |
FAM134C | Mature miRNA region |
ZC3H18 | Mature miRNA region |
DMD | Mature miRNA region |
HOXC13 | Mature miRNA region |
PTPRJ | Mature miRNA region |
UBA6 | Mature miRNA region |
LATS2 | Mature miRNA region |
EXOC6 | Mature miRNA region |
FOXP3 | Mature miRNA region |
TRIB3 | Mature miRNA region |
PPP2R5C | Mature miRNA region |
LRRC59 | Mature miRNA region |
DDX19A | Mature miRNA region |
SATB2 | Mature miRNA region |
CDK1 | Mature miRNA region |
ITGA5 | Mature miRNA region |
ICAM1 | Mature miRNA region |
C2CD5 | Mature miRNA region |
MLH1 | Mature miRNA region |
DACT3 | Mature miRNA region |
JAZF1 | Mature miRNA region |
NUS1 | Mature miRNA region |
XK | Mature miRNA region |
SELE | Mature miRNA region |
SMEK2 | Mature miRNA region |
NFATC2IP | Mature miRNA region |
NUP188 | Mature miRNA region |
DNAJC5 | Mature miRNA region |
MPRIP | Mature miRNA region |
ARL6IP5 | Mature miRNA region |
NOP56 | Mature miRNA region |
AGO1 | Mature miRNA region |
ETS1 | Mature miRNA region |
RPL37A | Mature miRNA region |
SRRM2 | Mature miRNA region |
HIST1H2BK | Mature miRNA region |
TNRC6B | Mature miRNA region |
TRRAP | Mature miRNA region |
TXNDC5 | Mature miRNA region |
MYO1D | Mature miRNA region |
INHBA | Mature miRNA region |
HIF1AN | Mature miRNA region |
RET | Mature miRNA region |
SFXN1 | Mature miRNA region |
FLNA | Mature miRNA region |
RPA1 | Mature miRNA region |
GLI2 | Mature miRNA region |
ARPC5 | Mature miRNA region |
PRKCE | Mature miRNA region |
PPP2R2A | Mature miRNA region |
HIST1H2BI | Mature miRNA region |
NUMB | Mature miRNA region |
STK40 | Mature miRNA region |
RAN | Mature miRNA region |
EDC3 | Mature miRNA region |
CXCL12 | Mature miRNA region |
NOL9 | Mature miRNA region |
STOML2 | Mature miRNA region |
RASA1 | Mature miRNA region |
RANGAP1 | Mature miRNA region |
SLC9A6 | Mature miRNA region |
ZNF275 | Mature miRNA region |
MCM2 | Mature miRNA region |
HOXA7 | Mature miRNA region |
PPIA | Mature miRNA region |
PPIL2 | Mature miRNA region |
GYG1 | Mature miRNA region |
RDX | Mature miRNA region |
CIPC | Mature miRNA region |
KLF13 | Mature miRNA region |
CASR | Mature miRNA region |
AKAP8L | Mature miRNA region |
RPS7 | Mature miRNA region |
CREG1 | Mature miRNA region |
RHOA | Mature miRNA region |
MCM4 | Mature miRNA region |
ILF2 | Mature miRNA region |
RPS4Y1 | Mature miRNA region |
HEATR2 | Mature miRNA region |
PEX19 | Mature miRNA region |
HIST1H2BJ | Mature miRNA region |
GHITM | Mature miRNA region |
EEF1A1 | miRNA target sites |
RPP40 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs1412395 | chr9:21471499-21471500 | Weak transcription Enhancers Strong transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs78588252 | chr9:21471531-21471532 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs537421800 | chr9:21471540-21471541 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs111914895 | chr9:21471593-21471594 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs566098811 | chr9:21471603-21471604 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs115668153 | chr9:21471615-21471616 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs372427909 | chr9:21471625-21471626 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs181866358 | chr9:21471638-21471639 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs570543130 | chr9:21471648-21471649 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs539545512 | chr9:21471707-21471708 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs117832159 | chr9:21471721-21471722 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs2383192 | chr9:21471726-21471727 | Weak transcription Enhancers Strong transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
13 | rs371853805 | chr9:21471776-21471777 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs149279271 | chr9:21471798-21471799 | Weak transcription Enhancers Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs554822118 | chr9:21471839-21471840 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs574661103 | chr9:21471844-21471845 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs537278310 | chr9:21471859-21471860 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs543735424 | chr9:21471861-21471862 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs139270998 | chr9:21471881-21471882 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs144102204 | chr9:21471933-21471934 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs10965009 | chr9:21471957-21471958 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs190184338 | chr9:21471996-21471997 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs117346827 | chr9:21471997-21471998 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs548517183 | chr9:21472015-21472016 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs562368929 | chr9:21472041-21472042 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs376420609 | chr9:21472062-21472063 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs375376673 | chr9:21472095-21472096 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs370718826 | chr9:21472099-21472100 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs531092068 | chr9:21472119-21472120 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs550912402 | chr9:21472136-21472137 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs181802349 | chr9:21472160-21472161 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs539458659 | chr9:21472165-21472166 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs376224894 | chr9:21472355-21472356 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs146016304 | chr9:21472364-21472365 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs538369883 | chr9:21472373-21472374 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs75135358 | chr9:21472392-21472393 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs10965010 | chr9:21472419-21472420 | Weak transcription Strong transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
38 | rs148702974 | chr9:21472475-21472476 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs537340271 | chr9:21472478-21472479 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs186304195 | chr9:21472492-21472493 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs371268098 | chr9:21472503-21472504 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs191218595 | chr9:21472518-21472519 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs114127183 | chr9:21472594-21472595 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs181407502 | chr9:21472596-21472597 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs572864222 | chr9:21472681-21472682 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs374383371 | chr9:21472701-21472702 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs541939666 | chr9:21472744-21472745 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs185289265 | chr9:21472779-21472780 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs117633264 | chr9:21472828-21472829 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs557876156 | chr9:21472852-21472853 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Glioblastoma multiforme | 21080181 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Breast cancer | 16608533 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Breast cancer | 16272173 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Breast cancer | 17133270 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Cervical cancer | 21063398 | CNVD |
Retinoblastoma | 22278416 | CNVD |
Splenic marginal zone lymphoma | 18492102 | CNVD |
Melanoma | 18172304 | CNVD |
Biliary cancer | 19435499 | CNVD |
Gastric cancer | 21586687 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Myopathy | 18421352 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Acute lymphoblastic leukemia | 18957548 | CNVD |
Myeloproliferative neoplasm | 17564968 | CNVD |
Malignant meningioma | 17937814 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Glioma | 21971842 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Cutaneous squamous cell carcinomas | 19131950 | CNVD |
Small bowel adenocarcinoma | 21586687 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Chordoma | 18071362 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Chordoma | 21602918 | CNVD |
Renal cell carcinoma | 18592004 | CNVD |
Developmental delay | 19490664 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
microdeletion syndrome | 16199537 | CNVD |
Non-syndromic sensorineural hearing loss | 21987784 | CNVD |
Cancer | 20164919 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Lung cancer | 18438408 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Oral cancer | 21386901 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Breast cancer | 21785460 | CNVD |
Esophageal adenocarcinoma | 19417022 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 21858162 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Autism | 22495311 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Developmental delay | 21147756 | CNVD |
Pilocytic astrocytoma | 18670637 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Melanoma | 22183965 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Cancer | 22183965 | CNVD |
Glioblastoma multiforme | 21569311 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ewing''s sarcoma | 22429812 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Glioblastoma multiforme | 19435819 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Glioblastoma multiforme | 22291905 | CNVD |
Lung cancer | 21911935 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
head and neck squamous cell carcinoma | 21798897 | CNVD |
Cancer | 21253487 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Glioblastoma multiforme | 21922591 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
T-cell acute lymphoblastic leukemia | 19406988 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Glioma | 17123091 | CNVD |
Mental retardation | 17124404 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Acute lymphoblastic leukemia | 18768390 | CNVD |
Leukemia | 19602459 | CNVD |
Acute monocytic leukemia | 16498392 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Leukemia | 18688285 | CNVD |
T-cell acute lymphoblastic leukemia | 18185524 | CNVD |
Acute myeloid leukemia | 19651601 | CNVD |
Coronary Disease | 20032323 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cancer | 21732550 | CNVD |
Gastric cancer | 22539939 | CNVD |
Cancer | 21183584 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Metastatic melanoma | 18483359 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Cervical cancer | 21062161 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Glioblastoma | 17090523 | CNVD |
Lung cancer | 16773561 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Bladder cancer | 19088036 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Melanoma | 16977458 | CNVD |
Glioblastoma multiforme | 17369134 | CNVD |
Chagasic megaesophagus | 20163722 | CNVD |
Melanoma | 19566914 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Hodgkin''s lymphoma | 18179710 | CNVD |
Glioma | 20126413 | CNVD |
Melanoma | 17363583 | CNVD |
Glioblastoma multiforme | 19115005 | CNVD |
Glioblastoma multiforme | 21525872 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Adenoid cystic carcinoma | 18332873 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20581869 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Intellectual disability | 22102821 | CNVD |
Oral cancer | 22144094 | CNVD |
Lung cancer | 21569311 | CNVD |
Epilepsy | 20502679 | CNVD |
Barrett''s syndrome | 19417022 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Breast cancer | 22522925 | CNVD |
Autism | 20858261 | CNVD |
Epilepsy | 20858261 | CNVD |
Mental retardation | 20858261 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Cancer | 20164920 | CNVD |
Non-small cell lung cancer | 16651412 | CNVD |
Breast cancer | 17142309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:21454800-21474400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
2 | chr9:21454800-21481600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
3 | chr9:21455200-21481000 | Weak transcription | NHDF-Ad | bronchial |
4 | chr9:21455800-21481000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
5 | chr9:21456000-21476600 | Weak transcription | NHLF | lung |
6 | chr9:21462600-21474600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
7 | chr9:21463000-21502200 | Weak transcription | HSMM | muscle |
8 | chr9:21465400-21474600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
9 | chr9:21466000-21473600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
10 | chr9:21466000-21527600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
11 | chr9:21467000-21478600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
12 | chr9:21468600-21477600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
13 | chr9:21468800-21473400 | Weak transcription | NHEK | skin |
14 | chr9:21469000-21476400 | Weak transcription | A549 | lung |
15 | chr9:21469000-21478200 | Strong transcription | Osteobl | bone |
16 | chr9:21469200-21477800 | Strong transcription | HMEC | breast |
17 | chr9:21469400-21471800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
18 | chr9:21470200-21472000 | Strong transcription | Muscle Satellite Cultured Cells | -- |
19 | chr9:21470200-21477800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
20 | chr9:21470800-21471600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
21 | chr9:21470800-21473400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
22 | chr9:21471000-21471600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
23 | chr9:21471000-21471800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
24 | chr9:21471400-21477800 | Strong transcription | NH-A | brain |
25 | chr9:21471600-21505600 | Weak transcription | HUVEC | blood vessel |
26 | chr9:21471800-21473400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
27 | chr9:21472000-21472800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
28 | chr9:21472800-21473800 | Strong transcription | Muscle Satellite Cultured Cells | -- |
29 | chr9:21473400-21473600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
30 | chr9:21473400-21475400 | Strong transcription | NHEK | skin |
31 | chr9:21473400-21475800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
32 | chr9:21473600-21474200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
33 | chr9:21473600-21475000 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
34 | chr9:21473800-21476400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
35 | chr9:21474200-21474600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
36 | chr9:21474400-21477000 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
37 | chr9:21474600-21475000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
38 | chr9:21474600-21475400 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
39 | chr9:21474600-21475800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
40 | chr9:21475000-21481000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
41 | chr9:21475000-21485600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
42 | chr9:21475400-21478000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
43 | chr9:21475400-21481000 | Weak transcription | NHEK | skin |
44 | chr9:21475800-21476600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
45 | chr9:21475800-21477400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
46 | chr9:21476400-21477200 | Strong transcription | A549 | lung |
47 | chr9:21476400-21478400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
48 | chr9:21476600-21477400 | Strong transcription | NHLF | lung |
49 | chr9:21476600-21477800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
50 | chr9:21476600-21481200 | Weak transcription | Stomach Mucosa | stomach |