Variant report

Variant	nsv893510
Chromosome Location	chr9:84954592-85117420
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:685)
CpG islands
(count:61)
Chromatin interactive
region (count:17)
LncRNA
region (count:62)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:685 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:85103424-85103941	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:85081980-85082088	HepG2	liver:	n/a	n/a
3	ATF2	chr9:85025221-85025581	GM12878	blood:	n/a	n/a
4	BATF	chr9:84998190-84998518	GM12878	blood:	n/a	n/a
5	BATF	chr9:85025234-85025563	GM12878	blood:	n/a	chr9:85025416-85025427
6	BATF	chr9:85025194-85025607	GM12878	blood:	n/a	chr9:85025416-85025427
7	BCL11A	chr9:85025297-85025525	GM12878	blood:	n/a	n/a
8	CEBPB	chr9:85066665-85066873	HepG2	liver:	n/a	chr9:85066724-85066735
9	CEBPB	chr9:85025258-85025687	MCF-7	breast:	n/a	n/a
10	CEBPB	chr9:85103740-85104071	HepG2	liver:	n/a	n/a
11	CEBPB	chr9:84971835-84972116	H1-hESC	embryonic stem cell:	n/a	n/a
12	CEBPB	chr9:85066671-85066891	A549	lung:	n/a	chr9:85066724-85066735
13	CEBPB	chr9:84955789-84956093	IMR90	lung:	n/a	n/a
14	CEBPB	chr9:84983769-84984253	MCF-7	breast:	n/a	n/a
15	CEBPB	chr9:84971874-84971981	A549	lung:	n/a	n/a
16	CEBPB	chr9:85025807-85026283	MCF-7	breast:	n/a	chr9:85025991-85026004
17	CEBPB	chr9:84971882-84972110	IMR90	lung:	n/a	n/a
18	CEBPB	chr9:84955847-84956110	HepG2	liver:	n/a	n/a
19	CEBPB	chr9:85072384-85072419	HepG2	liver:	n/a	n/a
20	CEBPB	chr9:84991815-84992114	HepG2	liver:	n/a	chr9:84991960-84991971
21	CEBPB	chr9:84991913-84992054	IMR90	lung:	n/a	chr9:84991960-84991971
22	CEBPB	chr9:85030974-85031301	HepG2	liver:	n/a	chr9:85031122-85031133
23	CEBPB	chr9:85025348-85025560	A549	lung:	n/a	n/a
24	CEBPB	chr9:85090757-85091049	HepG2	liver:	n/a	n/a
25	CEBPB	chr9:85025252-85025627	IMR90	lung:	n/a	n/a
26	CEBPB	chr9:85025165-85026460	MCF-7	breast:	n/a	chr9:85025991-85026004
27	CEBPB	chr9:85053582-85053825	IMR90	lung:	n/a	chr9:85053731-85053740 chr9:85053731-85053740 chr9:85053731-85053740 chr9:85053731-85053740 chr9:85053731-85053742
28	CEBPB	chr9:85105119-85105456	IMR90	lung:	n/a	n/a
29	CEBPB	chr9:84969093-84969621	IMR90	lung:	n/a	n/a
30	CEBPB	chr9:85051501-85051701	IMR90	lung:	n/a	n/a
31	CREB1	chr9:85025256-85025647	GM12878	blood:	n/a	n/a
32	CTCF	chr9:85107340-85107490	HPAF	blood vessel:	n/a	n/a
33	CTCF	chr9:85081900-85082050	BJ	skin:	n/a	chr9:85082007-85082023
34	CTCF	chr9:85081920-85082070	SK-N-SH_RA	brain:	n/a	chr9:85082007-85082023
35	CTCF	chr9:85081817-85082171	H1-hESC	embryonic stem cell:	n/a	chr9:85082007-85082023
36	CTCF	chr9:85081820-85081970	HRPEpiC	eye:	n/a	n/a
37	CTCF	chr9:85107399-85107452	Kidney_OC	kidney:	n/a	n/a
38	CTCF	chr9:85081920-85082070	HCPEpiC	choroid plexus:	n/a	chr9:85082007-85082023
39	CTCF	chr9:85107320-85107470	HAc	cerebellar:	n/a	n/a
40	CTCF	chr9:85081939-85082098	Pancreas_OC	pancreas:	n/a	chr9:85082007-85082023
41	CTCF	chr9:85081960-85082110	GM12873	blood:	n/a	chr9:85082007-85082023
42	CTCF	chr9:85081857-85082169	HepG2	liver:	n/a	chr9:85082007-85082023
43	CTCF	chr9:85107353-85107454	MCF-7	breast:	n/a	n/a
44	CTCF	chr9:85081940-85082090	AG09309	skin:	n/a	chr9:85082007-85082023
45	CTCF	chr9:85006360-85006510	HEK293	kidney:	n/a	n/a
46	CTCF	chr9:85114360-85114510	RPTEC	kidney:	n/a	n/a
47	CTCF	chr9:85081920-85082070	AG09319	gingival:	n/a	chr9:85082007-85082023
48	CTCF	chr9:85081903-85082153	Medullo	brain:	n/a	chr9:85082007-85082023
49	CTCF	chr9:85081960-85082110	HPF	lung:	n/a	chr9:85082007-85082023
50	CTCF	chr9:85081917-85082071	SK-N-SH_RA	brain:	n/a	chr9:85082007-85082023

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:85020050-85020100	HAEpiC	amniotic membrane:	n/a
2	chr9:85020050-85020100	T-47D	breast:	n/a
3	chr9:85020050-85020100	NHBE	bronchial:	n/a
4	chr9:85020050-85020100	A549	lung:	n/a
5	chr9:85020050-85020100	HRCEpiC	kidney:	n/a
6	chr9:85020050-85020100	AG04449	skin:	fetal
7	chr9:85020050-85020100	GM12892	blood:	n/a
8	chr9:85020050-85020100	GM12878	blood:	n/a
9	chr9:85020050-85020100	NT2-D1	testis:	n/a
10	chr9:85020050-85020100	SAEC	small airway:	n/a
11	chr9:85020050-85020100	SKMC	muscle:	n/a
12	chr9:85020050-85020100	RPTEC	kidney:	n/a
13	chr9:85020050-85020100	PANC-1	pancreas:	n/a
14	chr9:85020050-85020100	HEEpiC	esophagus:	n/a
15	chr9:85020050-85020100	NH-A	brain:	n/a
16	chr9:85020050-85020100	HIPEpiC	eye:	n/a
17	chr9:85020050-85020100	AG09319	gingival:	n/a
18	chr9:85020050-85020100	GM19239	blood:	n/a
19	chr9:85020050-85020100	PrEC	prostate:	n/a
20	chr9:85020050-85020100	H1-hESC	embryonic stem cell:	embryo
21	chr9:85020050-85020100	ECC-1	luminal epithelium:	n/a
22	chr9:85020050-85020100	NB4	blood:	n/a
23	chr9:85020050-85020100	AG04450	lung:	fetal
24	chr9:85020050-85020100	ProgFib	skin:	n/a
25	chr9:85020050-85020100	SK-N-SH_RA	brain:	n/a
26	chr9:85020050-85020100	HCF	heart:	n/a
27	chr9:85020050-85020100	MCF10A-Er-Src	breast:	n/a
28	chr9:85020050-85020100	Hela-S3	cervix:	n/a
29	chr9:85020050-85020100	MCF-7	breast:	n/a
30	chr9:85020050-85020100	HepG2	liver:	n/a
31	chr9:85020050-85020100	NHDF-neo	bronchial:	n/a
32	chr9:85020050-85020100	HCT-116	colon:	n/a
33	chr9:85020050-85020100	Caco-2	colon:	n/a
34	chr9:85020050-85020100	HL-60	blood:	n/a
35	chr9:85020050-85020100	HUVEC	blood vessel:	n/a
36	chr9:85020050-85020100	HRPEpiC	eye:	n/a
37	chr9:85020050-85020100	SK-N-SH	brain:	n/a
38	chr9:85020050-85020100	K562	blood:	n/a
39	chr9:85020050-85020100	HPAEpiC	pulmonary alveolar:	n/a
40	chr9:85020050-85020100	HRE	kidney:	n/a
41	chr9:85020050-85020100	U87	brain:	n/a
42	chr9:85020050-85020100	HEK293	kidney:	embryo
43	chr9:85020050-85020100	GM06990	blood:	n/a
44	chr9:85020050-85020100	CMK	blood:	n/a
45	chr9:85020050-85020100	HNPCEpiC	eye:	n/a
46	chr9:85020050-85020100	SK-N-MC	brain:	n/a
47	chr9:85020050-85020100	ovcar-3	ovarian:	n/a
48	chr9:85020050-85020100	HCPEpiC	choroid plexus:	n/a
49	chr9:85020050-85020100	Hepatocyte	liver:	n/a
50	chr9:85020050-85020100	Jurkat	blood:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:84983133..84986129-chr9:85021514..85023241,2	MCF-7	breast:
2	chr9:84950816..84952967-chr9:84985391..84988044,2	MCF-7	breast:
3	chr9:84997983..85000625-chr9:85039684..85042502,2	MCF-7	breast:
4	chr9:84970664..84973580-chr9:84975501..84978043,2	MCF-7	breast:
5	chr9:85009985..85011686-chr9:85015834..85018239,2	MCF-7	breast:
6	chr9:84983133..84986129-chr9:85021514..85023241,2	MCF-7	breast:
7	chr9:84997983..85000625-chr9:85039684..85042502,2	MCF-7	breast:
8	chr9:84970664..84973580-chr9:84975501..84978043,2	MCF-7	breast:
9	chr9:84983442..84984621-chr9:85025269..85026194,3	MCF-7	breast:
10	chr9:85092539..85095359-chr9:85099024..85100878,2	MCF-7	breast:
11	chr9:85111301..85113649-chr9:85675485..85677870,2	MCF-7	breast:
12	chr9:84975589..84977641-chr9:84987476..84989507,2	MCF-7	breast:
13	chr9:85009985..85011686-chr9:85015834..85018239,2	MCF-7	breast:
14	chr9:84950253..84952417-chr9:84953799..84956702,3	MCF-7	breast:
15	chr9:85092539..85095359-chr9:85099024..85100878,2	MCF-7	breast:
16	chr9:84975589..84977641-chr9:84987476..84989507,2	MCF-7	breast:
17	chr9:84983442..84984621-chr9:85025269..85026194,3	MCF-7	breast:

(count:62 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM75D1-4	chr9:85041207-85041291	ENSG00000228430.4
2	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
3	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
4	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
5	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
6	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
7	lnc-FAM75D1-4	chr9:85041207-85041291	ENSG00000228430.4
8	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
9	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
10	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
11	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
12	lnc-FAM75D1-4	chr9:85106861-85106969	NONHSAT132722
13	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
14	lnc-FAM75D1-4	chr9:85066518-85066638	ENSG00000228430.4
15	lnc-FAM75D1-2	chr9:85020103-85020225	XLOC_007421
16	lnc-FAM75D1-2	chr9:85020823-85021154	XLOC_007421
17	lnc-FAM75D1-4	chr9:85068553-85068718	XLOC_007422
18	lnc-FAM75D1-4	chr9:85106867-85106969	ENSG00000228430.4
19	lnc-FAM75D1-4	chr9:85043114-85043202	ENSG00000228430.4
20	lnc-FAM75D1-4	chr9:85064556-85064700	ENSG00000228430.4
21	lnc-FAM75D1-4	chr9:85041897-85041941	ENSG00000228430.4
22	lnc-FAM75D1-4	chr9:85068553-85068914	ENSG00000228430.4
23	lnc-FAM75D1-4	chr9:85106867-85106969	ENSG00000228430.4
24	lnc-FAM75D1-4	chr9:85068668-85068718	XLOC_007422
25	lnc-FAM75D1-4	chr9:85041207-85041291	ENSG00000228430.4
26	lnc-FAM75D1-4	chr9:85069822-85070140	XLOC_007422
27	lnc-FAM75D1-4	chr9:85111630-85111773	ENSG00000228430.4
28	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
29	lnc-FAM75D1-4	chr9:85111630-85111773	ENSG00000228430.4
30	lnc-FAM75D1-4	chr9:85068553-85068644	ENSG00000228430.4
31	lnc-FAM75B-4	chr9:85051617-85052093	expReg_chr9_3630_-
32	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
33	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
34	lnc-FAM75D1-4	chr9:85066518-85066644	ENSG00000228430.4
35	lnc-FAM75D1-8	chr9:85024066-85024112	NONHSAT132718
36	lnc-FAM75D1-4	chr9:85068553-85068718	ENSG00000228430.4
37	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
38	lnc-FAM75D1-4	chr9:85068260-85068358	ENSG00000228430.4
39	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
40	lnc-FAM75D1-4	chr9:85043114-85043208	ENSG00000228430.4
41	lnc-FAM75D1-4	chr9:84964719-84964763	ENSG00000228430.4
42	lnc-FAM75B-3	chr9:85042265-85042940	NONHSAT132719
43	lnc-FAM75D1-4	chr9:85043114-85043395	ENSG00000228430.4
44	lnc-FAM75D1-4	chr9:85041207-85041291	ENSG00000228430.4
45	lnc-FAM75D1-4	chr9:85068553-85068718	ENSG00000228430.4
46	lnc-FAM75D1-4	chr9:85068260-85068373	ENSG00000228430.4
47	lnc-FAM75D1-4	chr9:85111630-85111773	ENSG00000228430.4
48	lnc-FAM75D1-4	chr9:85068260-85068373	ENSG00000228430.4
49	lnc-FAM75D1-4	chr9:85106867-85106969	ENSG00000228430.4
50	lnc-FAM75D1-8	chr9:85038451-85038654	NONHSAT132718

No data

Variant related genes	Relation type
ENSG00000228046	TF binding region
ENSG00000228123	TF binding region
ENSG00000232749	TF binding region
ENSG00000225085	TF binding region
ENSG00000228430	TF binding region
ENSG00000228046	CpG island
ENSG00000228123	CpG island
ENSG00000232749	CpG island
ENSG00000225085	CpG island
ENSG00000228430	CpG island

Extended variants
information (count: 3866 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:3866 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2774635	chr9:84954592-84954593	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs548112195	chr9:84954652-84954653	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs373455997	chr9:84954694-84954695	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs561418264	chr9:84954762-84954763	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs190647607	chr9:84954846-84954847	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs555521838	chr9:84954849-84954850	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs571628936	chr9:84954867-84954868	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs140649133	chr9:84954872-84954873	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs551293929	chr9:84954922-84954923	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs569480333	chr9:84954933-84954934	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs373467809	chr9:84954963-84954964	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs536839225	chr9:84954988-84954989	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs150084186	chr9:84955038-84955039	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs575476676	chr9:84955069-84955070	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs114848729	chr9:84955169-84955170	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs2788106	chr9:84955250-84955251	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs556976515	chr9:84955265-84955266	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs576418817	chr9:84955286-84955287	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs543849854	chr9:84955295-84955296	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs79632245	chr9:84955344-84955345	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs574675854	chr9:84955382-84955383	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542123271	chr9:84955426-84955427	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs79438901	chr9:84955532-84955533	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs527490991	chr9:84955553-84955554	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs180830240	chr9:84955573-84955574	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs565427113	chr9:84955577-84955578	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs187321889	chr9:84955584-84955585	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs372649113	chr9:84955669-84955670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs190876105	chr9:84955726-84955727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs569251413	chr9:84955824-84955825	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs530304275	chr9:84955825-84955826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs548869145	chr9:84955860-84955861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs183023743	chr9:84955874-84955875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs534160947	chr9:84955877-84955878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs558225977	chr9:84955906-84955907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs570239496	chr9:84955908-84955909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs537431778	chr9:84955914-84955915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs80211498	chr9:84955931-84955932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs138399020	chr9:84955999-84956000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs2788107	chr9:84956004-84956005	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs554076276	chr9:84956060-84956061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs572268273	chr9:84956082-84956083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs187227561	chr9:84956113-84956114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs112852661	chr9:84956140-84956141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190109693	chr9:84956151-84956152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs149251406	chr9:84956225-84956226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs542087751	chr9:84956239-84956240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs544742766	chr9:84956289-84956290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs145314721	chr9:84956327-84956328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs534141347	chr9:84956363-84956364	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Urothelial cell carcinoma	18451213	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Renal cell carcinoma	18765545	CNVD
Astrocytoma	22246337	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Epilepsy	20502679	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:443 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:84949400-84963800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr9:84953600-84955000	Enhancers	Muscle Satellite Cultured Cells	--
3	chr9:84953600-84955200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr9:84953600-84955600	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr9:84953600-84955600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr9:84953800-84955400	Enhancers	Dnd41	blood
7	chr9:84954000-84954600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr9:84954000-84954800	Enhancers	HUVEC	blood vessel
9	chr9:84954200-84954600	Enhancers	Osteobl	bone
10	chr9:84954200-84954800	Enhancers	Fetal Lung	lung
11	chr9:84954200-84955600	Enhancers	Primary hematopoietic stem cells	blood
12	chr9:84954400-84955000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr9:84954800-84955400	Weak transcription	Fetal Lung	lung
14	chr9:84955000-84955600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr9:84955000-84957000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr9:84955200-84957000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr9:84955400-84955600	Enhancers	Fetal Lung	lung
18	chr9:84955600-84956800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr9:84955600-84957800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr9:84956800-84957600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr9:84957000-84957200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr9:84957000-84957400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr9:84957200-84957400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr9:84957200-84961200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr9:84957800-84958400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr9:84961000-84961800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr9:84961000-84962200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr9:84961200-84961800	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr9:84963800-84964200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr9:84964200-84968000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr9:84967400-84970000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr9:84967800-84971600	Enhancers	HMEC	breast
33	chr9:84968000-84972200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr9:84968200-84970400	Enhancers	Osteobl	bone
35	chr9:84968200-84972200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr9:84968200-84972200	Enhancers	NHEK	skin
37	chr9:84968400-84972200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr9:84968600-84970200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr9:84968600-84970200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr9:84968600-84970400	Enhancers	NH-A	brain
41	chr9:84968600-84970800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr9:84968600-84971000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr9:84968600-84971400	Enhancers	Muscle Satellite Cultured Cells	--
44	chr9:84968800-84970200	Enhancers	HSMM	muscle
45	chr9:84969000-84969200	Enhancers	HSMMtube	muscle
46	chr9:84969000-84970000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr9:84969000-84970000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr9:84969000-84970600	Enhancers	NHDF-Ad	bronchial
49	chr9:84969600-84970000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr9:84969600-84970000	Enhancers	NHLF	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links