Variant report

Variant	nsv893595
Chromosome Location	chr9:97268182-97330693
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:828)
CpG islands
(count:61)
Chromatin interactive
region (count:32)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:828 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:97269975-97270547	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:97316828-97317415	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:97315560-97315747	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:97295254-97295834	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:97273781-97274194	HepG2	liver:	n/a	n/a
6	ATF1	chr9:97326371-97326372	K562	blood:	n/a	n/a
7	ATF2	chr9:97316673-97317135	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr9:97316593-97317233	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr9:97316667-97316977	H1-hESC	embryonic stem cell:	n/a	n/a
10	BHLHE40	chr9:97316492-97317057	K562	blood:	n/a	n/a
11	BRCA1	chr9:97316748-97317370	Hela-S3	cervix:	n/a	n/a
12	BRCA1	chr9:97316650-97317300	H1-hESC	embryonic stem cell:	n/a	n/a
13	BRCA1	chr9:97316794-97316973	HepG2	liver:	n/a	n/a
14	CBX3	chr9:97316658-97317103	K562	blood:	n/a	n/a
15	CCNT2	chr9:97316782-97316973	K562	blood:	n/a	n/a
16	CEBPB	chr9:97270166-97270600	MCF-7	breast:	n/a	n/a
17	CEBPB	chr9:97316685-97317057	K562	blood:	n/a	chr9:97316884-97316895
18	CEBPB	chr9:97307897-97307916	A549	lung:	n/a	n/a
19	CEBPB	chr9:97316653-97317274	MCF-7	breast:	n/a	chr9:97316884-97316895
20	CEBPB	chr9:97279663-97279825	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr9:97270183-97270535	HepG2	liver:	n/a	n/a
22	CEBPB	chr9:97270257-97270424	HepG2	liver:	n/a	n/a
23	CEBPB	chr9:97316730-97317018	K562	blood:	n/a	chr9:97316884-97316895
24	CEBPB	chr9:97316689-97317077	K562	blood:	n/a	chr9:97316884-97316895
25	CEBPB	chr9:97316697-97317044	H1-hESC	embryonic stem cell:	n/a	chr9:97316884-97316895
26	CEBPB	chr9:97279585-97279790	HepG2	liver:	n/a	n/a
27	CEBPB	chr9:97316700-97317276	ECC-1	luminal epithelium:	n/a	chr9:97316884-97316895
28	CEBPB	chr9:97316779-97316925	HepG2	liver:	n/a	chr9:97316884-97316895
29	CEBPB	chr9:97315429-97315642	HepG2	liver:	n/a	n/a
30	CEBPB	chr9:97315576-97315645	K562	blood:	n/a	n/a
31	CEBPB	chr9:97316739-97317051	HepG2	liver:	n/a	chr9:97316884-97316895
32	CEBPB	chr9:97279633-97279875	K562	blood:	n/a	n/a
33	CEBPB	chr9:97270146-97270540	HepG2	liver:	n/a	n/a
34	CEBPB	chr9:97315504-97315656	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr9:97315349-97315821	MCF-7	breast:	n/a	n/a
36	CEBPB	chr9:97276813-97277321	HepG2	liver:	n/a	n/a
37	CEBPB	chr9:97315445-97315761	HepG2	liver:	n/a	n/a
38	CEBPB	chr9:97316733-97317111	Hela-S3	cervix:	n/a	chr9:97316884-97316895
39	CEBPB	chr9:97295489-97295823	HepG2	liver:	n/a	n/a
40	CEBPD	chr9:97317000-97317220	HepG2	liver:	n/a	n/a
41	CEBPD	chr9:97316984-97317225	HepG2	liver:	n/a	n/a
42	CHD1	chr9:97316774-97317575	H1-hESC	embryonic stem cell:	n/a	n/a
43	CHD2	chr9:97316491-97317373	Hela-S3	cervix:	n/a	n/a
44	CHD2	chr9:97315483-97315610	HepG2	liver:	n/a	n/a
45	CHD2	chr9:97316757-97317614	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD2	chr9:97316691-97317240	HepG2	liver:	n/a	n/a
47	CREB1	chr9:97316994-97317206	A549	lung:	n/a	n/a
48	CREB1	chr9:97316541-97317412	HepG2	liver:	n/a	n/a
49	CREB1	chr9:97316575-97317433	H1-hESC	embryonic stem cell:	n/a	n/a
50	CREB1	chr9:97316620-97317234	A549	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:97317179-97317229	HCT-116	colon:	n/a
2	chr9:97317179-97317229	HUVEC	blood vessel:	n/a
3	chr9:97317179-97317229	MCF10A-Er-Src	breast:	n/a
4	chr9:97317179-97317229	BJ	skin:	n/a
5	chr9:97317179-97317229	Hepatocyte	liver:	n/a
6	chr9:97317179-97317229	HRE	kidney:	n/a
7	chr9:97317179-97317229	NHDF-neo	bronchial:	n/a
8	chr9:97317179-97317229	AoSMC	blood vessel:	n/a
9	chr9:97317179-97317229	HAEpiC	amniotic membrane:	n/a
10	chr9:97317179-97317229	HepG2	liver:	n/a
11	chr9:97317179-97317229	HRCEpiC	kidney:	n/a
12	chr9:97317179-97317229	GM06990	blood:	n/a
13	chr9:97317179-97317229	GM19239	blood:	n/a
14	chr9:97317179-97317229	Hela-S3	cervix:	n/a
15	chr9:97317179-97317229	SK-N-MC	brain:	n/a
16	chr9:97317179-97317229	NB4	blood:	n/a
17	chr9:97317179-97317229	AG04450	lung:	fetal
18	chr9:97317179-97317229	HCF	heart:	n/a
19	chr9:97317179-97317229	GM12891	blood:	n/a
20	chr9:97317179-97317229	BE2_C	brain:	n/a
21	chr9:97317179-97317229	HPAEpiC	pulmonary alveolar:	n/a
22	chr9:97317179-97317229	IMR90	lung:	fetal
23	chr9:97317179-97317229	K562	blood:	n/a
24	chr9:97317179-97317229	AG10803	skin:	n/a
25	chr9:97317179-97317229	HEK293	kidney:	embryo
26	chr9:97317179-97317229	SK-N-SH	brain:	n/a
27	chr9:97317179-97317229	Caco-2	colon:	n/a
28	chr9:97317179-97317229	PFSK-1	brain:	n/a
29	chr9:97317179-97317229	SK-N-SH_RA	brain:	n/a
30	chr9:97317179-97317229	MCF-7	breast:	n/a
31	chr9:97317179-97317229	H1-hESC	embryonic stem cell:	embryo
32	chr9:97317179-97317229	ProgFib	skin:	n/a
33	chr9:97317179-97317229	HMEC	breast:	n/a
34	chr9:97317179-97317229	ovcar-3	ovarian:	n/a
35	chr9:97317179-97317229	PrEC	prostate:	n/a
36	chr9:97317179-97317229	CMK	blood:	n/a
37	chr9:97317179-97317229	SKMC	muscle:	n/a
38	chr9:97317179-97317229	GM12878	blood:	n/a
39	chr9:97317179-97317229	HRPEpiC	eye:	n/a
40	chr9:97317179-97317229	RPTEC	kidney:	n/a
41	chr9:97317179-97317229	HIPEpiC	eye:	n/a
42	chr9:97317179-97317229	HL-60	blood:	n/a
43	chr9:97317179-97317229	HCM	heart:	n/a
44	chr9:97317179-97317229	U87	brain:	n/a
45	chr9:97317179-97317229	NH-A	brain:	n/a
46	chr9:97317179-97317229	HCPEpiC	choroid plexus:	n/a
47	chr9:97317179-97317229	T-47D	breast:	n/a
48	chr9:97317179-97317229	Jurkat	blood:	n/a
49	chr9:97317179-97317229	GM12892	blood:	n/a
50	chr9:97317179-97317229	AG09319	gingival:	n/a

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:97321525..97323509-chr9:97323790..97326441,2	MCF-7	breast:
2	chr9:97309308..97311468-chr9:97313942..97316861,2	MCF-7	breast:
3	chr7:100806149..100807853-chr9:97276402..97278973,2	MCF-7	breast:
4	chr9:97316436..97317261-chr9:97893369..97894207,2	K562	blood:
5	chr9:97308118..97310790-chr9:97312751..97314524,2	MCF-7	breast:
6	chr9:97315622..97318478-chr9:97321080..97323173,2	MCF-7	breast:
7	chr9:97321525..97323509-chr9:97323790..97326441,2	MCF-7	breast:
8	chr9:97325572..97327725-chr9:97393482..97394985,2	MCF-7	breast:
9	chr9:97324459..97327231-chr9:97329020..97331716,2	MCF-7	breast:
10	chr9:97316341..97317245-chr9:97365199..97365958,5	K562	blood:
11	chr9:97316907..97318477-chr9:97323350..97325979,2	MCF-7	breast:
12	chr9:97322497..97324885-chr9:97327603..97329721,3	K562	blood:
13	chr9:97316090..97317268-chr9:97365275..97366675,11	MCF-7	breast:
14	chr9:96827496..96828018-chr9:97299004..97299583,2	K562	blood:
15	chr9:97291272..97293465-chr9:97298151..97299892,2	K562	blood:
16	chr9:97270387..97272574-chr9:97275358..97278004,2	MCF-7	breast:
17	chr9:97308189..97310804-chr9:97316799..97318658,2	K562	blood:
18	chr9:97311721..97313513-chr9:97315633..97318443,2	MCF-7	breast:
19	chr9:97268511..97271349-chr9:97272265..97274587,2	K562	blood:
20	chr9:97328083..97332343-chr9:97333788..97336577,4	MCF-7	breast:
21	chr9:97308118..97310790-chr9:97312751..97314524,2	MCF-7	breast:
22	chr9:97315606..97318346-chr9:97888439..97891401,2	MCF-7	breast:
23	chr9:97322497..97324885-chr9:97327603..97329721,3	K562	blood:
24	chr9:97322900..97325527-chr9:97331742..97334023,2	MCF-7	breast:
25	chr9:97291272..97293465-chr9:97298151..97299892,2	K562	blood:
26	chr9:97324459..97327231-chr9:97329020..97331716,2	MCF-7	breast:
27	chr9:97309308..97311468-chr9:97313942..97316861,2	MCF-7	breast:
28	chr9:97270387..97272574-chr9:97275358..97278004,2	MCF-7	breast:
29	chr9:97308189..97309860-chr9:97315997..97318299,2	K562	blood:
30	chr9:97316754..97318987-chr9:97400777..97403144,3	MCF-7	breast:
31	chr9:97316005..97317970-chr9:97766242..97767931,2	MCF-7	breast:
32	chr9:97314619..97316650-chr9:97365797..97368541,2	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FBP2-3	chr9:97273822-97273860	NONHSAT133317
2	lnc-FBP2-2	chr9:97304188-97304269	NONHSAT133324
3	lnc-HIATL1-11	chr9:97280751-97281438	NONHSAT133322
4	lnc-HIATL1-12	chr9:97284317-97285679	NONHSAT133323
5	lnc-FBP2-2	chr9:97307553-97307654	NONHSAT133324
6	lnc-HIATL1-11	chr9:97282721-97283330	NONHSAT133322
7	lnc-HIATL1-11	chr9:97281876-97281926	NONHSAT133322
8	lnc-FBP2-2	chr9:97307784-97307855	NONHSAT133324
9	lnc-HIATL1-12	chr9:97285819-97288385	NONHSAT133323

No data

Variant related genes	Relation type
PCAT7	TF binding region
RNU6-669P	TF binding region
PCAT7	CpG island
RNU6-669P	CpG island
ENSG00000231806	chromatin interactions
ENSG00000202445	chromatin interactions
ENSG00000148120	chromatin interactions
ENSG00000158169	chromatin interactions
ENSG00000165140	chromatin interactions

Extended variants
information (count: 2855 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:2855 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7853182	chr9:97268182-97268183	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs540604801	chr9:97268184-97268185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs562081286	chr9:97268185-97268186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs574142173	chr9:97268227-97268228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs117494787	chr9:97268260-97268261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs149344731	chr9:97268268-97268269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs188758890	chr9:97268271-97268272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs78454754	chr9:97268278-97268279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs147492558	chr9:97268311-97268312	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs560814476	chr9:97268361-97268362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs116684774	chr9:97268370-97268371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs557621058	chr9:97268409-97268410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs566929655	chr9:97268431-97268432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs113297685	chr9:97268459-97268460	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs549844654	chr9:97268470-97268471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs571293896	chr9:97268479-97268480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs538810539	chr9:97268514-97268515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368037203	chr9:97268527-97268528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs553707649	chr9:97268534-97268535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs143899743	chr9:97268618-97268619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs35547968	chr9:97268660-97268661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs34981692	chr9:97268669-97268670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs536559729	chr9:97268671-97268672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs62348730	chr9:97268692-97268693	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs62578662	chr9:97268708-97268709	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs574081561	chr9:97268711-97268712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs148444520	chr9:97268729-97268730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs543932367	chr9:97268732-97268733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs578056260	chr9:97268733-97268734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs35426529	chr9:97268734-97268735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs1728868	chr9:97268735-97268736	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs545552950	chr9:97268774-97268775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs10124792	chr9:97268781-97268782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs527936373	chr9:97268790-97268791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs34684266	chr9:97268799-97268800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs34401957	chr9:97268804-97268805	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs542915304	chr9:97268821-97268822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs35831325	chr9:97268822-97268823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs9782656	chr9:97268837-97268838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs72652305	chr9:97268865-97268866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs72652306	chr9:97268866-97268867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs77438957	chr9:97268873-97268874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs561293031	chr9:97268880-97268881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs531197399	chr9:97268901-97268902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549545070	chr9:97268913-97268914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs76469536	chr9:97268917-97268918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs78513482	chr9:97268918-97268919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs76564210	chr9:97268921-97268922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs36137807	chr9:97268936-97268937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs571297149	chr9:97268937-97268938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Microcephaly	18830227	CNVD
overgrowth syndrome	16570072	CNVD
Effusion lymphoma	18079361	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Breast cancer	22522925	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:318 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:97261200-97272600	Weak transcription	Pancreas	Pancrea
2	chr9:97269800-97271200	Enhancers	HepG2	liver
3	chr9:97270400-97270600	Enhancers	Gastric	stomach
4	chr9:97270600-97272800	Weak transcription	Gastric	stomach
5	chr9:97271200-97272800	Weak transcription	HepG2	liver
6	chr9:97272600-97272800	Enhancers	Pancreas	Pancrea
7	chr9:97272800-97273200	Weak transcription	Pancreas	Pancrea
8	chr9:97272800-97273800	Enhancers	Gastric	stomach
9	chr9:97272800-97274800	Enhancers	HepG2	liver
10	chr9:97273200-97273800	Enhancers	Pancreas	Pancrea
11	chr9:97273400-97274600	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr9:97273400-97275200	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr9:97273800-97274000	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr9:97273800-97274600	Enhancers	Liver	Liver
15	chr9:97274600-97276600	Weak transcription	Liver	Liver
16	chr9:97274800-97276200	Weak transcription	HepG2	liver
17	chr9:97275200-97276000	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr9:97275600-97276000	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr9:97275600-97276200	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr9:97275600-97276400	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr9:97275800-97276200	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr9:97275800-97276400	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr9:97276200-97278000	Enhancers	HepG2	liver
24	chr9:97276400-97277400	Weak transcription	HUES64 Cell Line	embryonic stem cell
25	chr9:97276600-97277200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr9:97276600-97278000	Enhancers	Liver	Liver
27	chr9:97277200-97277800	Enhancers	Fetal Kidney	kidney
28	chr9:97277400-97277600	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr9:97278000-97279800	Weak transcription	HepG2	liver
30	chr9:97278000-97295200	Weak transcription	Liver	Liver
31	chr9:97279800-97281200	Enhancers	HepG2	liver
32	chr9:97293800-97296200	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr9:97295000-97295200	Enhancers	HepG2	liver
34	chr9:97295000-97297200	Enhancers	Fetal Intestine Large	intestine
35	chr9:97295000-97297200	Enhancers	Fetal Intestine Small	intestine
36	chr9:97295200-97295400	Enhancers	Rectal Mucosa Donor 29	rectum
37	chr9:97295200-97296200	Flanking Active TSS	HepG2	liver
38	chr9:97295200-97296400	Enhancers	Liver	Liver
39	chr9:97295200-97297200	Enhancers	Fetal Kidney	kidney
40	chr9:97295400-97295800	Active TSS	Duodenum Mucosa	Duodenum
41	chr9:97295400-97295800	Active TSS	Rectal Mucosa Donor 29	rectum
42	chr9:97295400-97295800	Enhancers	Rectal Mucosa Donor 31	rectum
43	chr9:97295400-97296000	Enhancers	Pancreas	Pancrea
44	chr9:97295400-97296000	Enhancers	A549	lung
45	chr9:97295400-97296200	Enhancers	Stomach Mucosa	stomach
46	chr9:97295800-97296000	Flanking Active TSS	Duodenum Mucosa	Duodenum
47	chr9:97295800-97296000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
48	chr9:97295800-97296200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr9:97295800-97297400	Enhancers	Rectal Mucosa Donor 29	rectum
50	chr9:97296000-97297200	Enhancers	Rectal Mucosa Donor 31	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links