Variant report

Variant	nsv893607
Chromosome Location	chr9:99906545-99996548
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:979)
CpG islands
(count:488)
Chromatin interactive
region (count:3)
LncRNA
region (count:36)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:979 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr9:99982856-99984390	H1-hESC	embryonic stem cell:	n/a	n/a
2	ATF2	chr9:99984388-99985100	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr9:99977754-99978001	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr9:99981989-99982295	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr9:99976867-99977201	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr9:99981818-99984334	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr9:99955341-99955359	K562	blood:	n/a	n/a
8	BACH1	chr9:99983272-99983972	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr9:99995434-99995498	K562	blood:	n/a	n/a
10	BACH1	chr9:99995458-99995632	H1-hESC	embryonic stem cell:	n/a	n/a
11	BATF	chr9:99984465-99984697	GM12878	blood:	n/a	n/a
12	BATF	chr9:99987396-99987596	GM12878	blood:	n/a	n/a
13	BATF	chr9:99956088-99956460	GM12878	blood:	n/a	chr9:99956249-99956260 chr9:99956275-99956286
14	BATF	chr9:99928821-99929031	GM12878	blood:	n/a	n/a
15	BATF	chr9:99987390-99987620	GM12878	blood:	n/a	n/a
16	BATF	chr9:99987054-99987282	GM12878	blood:	n/a	n/a
17	BCL11A	chr9:99984110-99984374	GM12878	blood:	n/a	chr9:99984153-99984166
18	BCL11A	chr9:99984868-99985050	GM12878	blood:	n/a	chr9:99984918-99984927
19	BCL11A	chr9:99987379-99987600	GM12878	blood:	n/a	n/a
20	BCL11A	chr9:99984436-99984715	GM12878	blood:	n/a	n/a
21	BCL11A	chr9:99983942-99984126	GM12878	blood:	n/a	chr9:99983961-99983974
22	BCL11A	chr9:99987376-99987628	GM12878	blood:	n/a	n/a
23	BHLHE40	chr9:99930605-99930636	K562	blood:	n/a	n/a
24	BHLHE40	chr9:99938665-99938753	K562	blood:	n/a	n/a
25	BHLHE40	chr9:99983908-99984108	K562	blood:	n/a	n/a
26	CBX3	chr9:99994472-99995102	K562	blood:	n/a	n/a
27	CBX3	chr9:99983628-99983965	K562	blood:	n/a	n/a
28	CCNT2	chr9:99930594-99930784	K562	blood:	n/a	n/a
29	CCNT2	chr9:99983809-99984069	K562	blood:	n/a	n/a
30	CEBPB	chr9:99993512-99993703	K562	blood:	n/a	n/a
31	CEBPB	chr9:99980574-99980786	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr9:99991860-99991890	K562	blood:	n/a	n/a
33	CEBPB	chr9:99941985-99942301	MCF-7	breast:	n/a	n/a
34	CEBPB	chr9:99991853-99991985	HepG2	liver:	n/a	chr9:99991894-99991905
35	CEBPB	chr9:99994400-99994971	K562	blood:	n/a	chr9:99994608-99994619
36	CEBPB	chr9:99912920-99913060	HepG2	liver:	n/a	chr9:99912955-99912966
37	CEBPB	chr9:99994431-99994716	HepG2	liver:	n/a	chr9:99994608-99994619
38	CEBPB	chr9:99941827-99942208	MCF-7	breast:	n/a	n/a
39	CEBPB	chr9:99941817-99942075	K562	blood:	n/a	n/a
40	CEBPB	chr9:99993532-99993734	HepG2	liver:	n/a	n/a
41	CEBPB	chr9:99994509-99994781	A549	lung:	n/a	chr9:99994608-99994619
42	CEBPB	chr9:99994424-99994811	K562	blood:	n/a	chr9:99994608-99994619
43	CEBPB	chr9:99994430-99994777	A549	lung:	n/a	chr9:99994608-99994619
44	CEBPB	chr9:99938608-99938672	K562	blood:	n/a	n/a
45	CEBPB	chr9:99994520-99994739	A549	lung:	n/a	chr9:99994608-99994619
46	CEBPD	chr9:99930342-99930881	K562	blood:	n/a	n/a
47	CEBPD	chr9:99994407-99995152	K562	blood:	n/a	n/a
48	CEBPD	chr9:99930459-99930728	K562	blood:	n/a	n/a
49	CHD1	chr9:99976860-99977170	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD1	chr9:99977420-99978139	H1-hESC	embryonic stem cell:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:99983156-99983206	HRE	kidney:	n/a
2	chr9:99984136-99984186	HEEpiC	esophagus:	n/a
3	chr9:99915901-99915951	HPAEpiC	pulmonary alveolar:	n/a
4	chr9:99984136-99984186	MCF-7	breast:	n/a
5	chr9:99983156-99983206	HEEpiC	esophagus:	n/a
6	chr9:99983156-99983206	GM12892	blood:	n/a
7	chr9:99963165-99963215	HPAEpiC	pulmonary alveolar:	n/a
8	chr9:99962350-99962400	GM12892	blood:	n/a
9	chr9:99963165-99963215	CMK	blood:	n/a
10	chr9:99984136-99984186	NHBE	bronchial:	n/a
11	chr9:99962039-99962089	A549	lung:	n/a
12	chr9:99962039-99962089	GM12878	blood:	n/a
13	chr9:99962350-99962400	AG04449	skin:	fetal
14	chr9:99983156-99983206	ProgFib	skin:	n/a
15	chr9:99984521-99984571	Hepatocyte	liver:	n/a
16	chr9:99962039-99962089	HepG2	liver:	n/a
17	chr9:99963165-99963215	U87	brain:	n/a
18	chr9:99963165-99963215	LNCaP	prostate:	n/a
19	chr9:99983156-99983206	LNCaP	prostate:	n/a
20	chr9:99984521-99984571	AG04449	skin:	fetal
21	chr9:99984521-99984571	GM19239	blood:	n/a
22	chr9:99962039-99962089	HPAEpiC	pulmonary alveolar:	n/a
23	chr9:99963165-99963215	HMEC	breast:	n/a
24	chr9:99962039-99962089	AoSMC	blood vessel:	n/a
25	chr9:99962039-99962089	HIPEpiC	eye:	n/a
26	chr9:99984136-99984186	NB4	blood:	n/a
27	chr9:99962350-99962400	GM12878	blood:	n/a
28	chr9:99983211-99983261	HRCEpiC	kidney:	n/a
29	chr9:99984136-99984186	AG10803	skin:	n/a
30	chr9:99984521-99984571	ovcar-3	ovarian:	n/a
31	chr9:99915901-99915951	HRE	kidney:	n/a
32	chr9:99983211-99983261	ECC-1	luminal epithelium:	n/a
33	chr9:99983211-99983261	HCPEpiC	choroid plexus:	n/a
34	chr9:99962350-99962400	NH-A	brain:	n/a
35	chr9:99983211-99983261	PrEC	prostate:	n/a
36	chr9:99983211-99983261	GM12878	blood:	n/a
37	chr9:99962350-99962400	HepG2	liver:	n/a
38	chr9:99962350-99962400	HCT-116	colon:	n/a
39	chr9:99984136-99984186	ECC-1	luminal epithelium:	n/a
40	chr9:99983156-99983206	GM12891	blood:	n/a
41	chr9:99963165-99963215	NHDF-neo	bronchial:	n/a
42	chr9:99984136-99984186	SAEC	small airway:	n/a
43	chr9:99962039-99962089	SAEC	small airway:	n/a
44	chr9:99962350-99962400	Jurkat	blood:	n/a
45	chr9:99915901-99915951	A549	lung:	n/a
46	chr9:99984136-99984186	AG04450	lung:	fetal
47	chr9:99983156-99983206	GM06990	blood:	n/a
48	chr9:99962350-99962400	BE2_C	brain:	n/a
49	chr9:99983211-99983261	NT2-D1	testis:	n/a
50	chr9:99962350-99962400	SK-N-SH_RA	brain:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:99985067..99987314-chr9:99998375..100001266,2	K562	blood:
2	chr9:99994043..99996478-chr9:99999503..100002032,3	K562	blood:
3	chr9:99983881..99984841-chr9:100149024..100149576,2	MCF-7	breast:

(count:36 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTSL2-5	chr9:99917886-99918005	NONHSAT133483
2	lnc-C9orf174-1	chr9:99995483-99995633	XLOC_007483
3	lnc-CTSL2-3	chr9:99957633-99957872	ENSG00000242375.1
4	lnc-CTSL2-4	chr9:99973655-99973769	ENSG00000159712.9
5	lnc-CTSL2-4	chr9:99954013-99954080	ENSG00000159712.9
6	lnc-CTSL2-4	chr9:99924037-99924248	ENSG00000159712.9
7	lnc-CTSL2-6	chr9:99910243-99911530	NONHSAT133477
8	lnc-CTSL2-4	chr9:99947724-99947797	ENSG00000159712.9
9	lnc-CTSL2-4	chr9:99983312-99983538	ENSG00000159712.9
10	lnc-CTSL2-6	chr9:99906742-99907022	NONHSAT133477
11	lnc-CTSL2-4	chr9:99922464-99922684	ENSG00000159712.9
12	lnc-C9orf174-2	chr9:99973941-99974529	NONHSAT133490
13	lnc-CTSL2-5	chr9:99924037-99924230	NONHSAT133483
14	lnc-CTSL2-5	chr9:99916172-99916337	NONHSAT133483
15	lnc-CTSL2-3	chr9:99957620-99958989	NONHSAT133488
16	lnc-CTSL2-5	chr9:99973655-99973769	ENSG00000203279.3
17	lnc-CTSL2-3	chr9:99959802-99959969	ENSG00000242375.1
18	lnc-CTSL2-6	chr9:99906923-99907022	NONHSAT133476
19	lnc-CTSL2-5	chr9:99920066-99920111	NONHSAT133483
20	lnc-CTSL2-4	chr9:99942283-99943198	ENSG00000159712.9
21	lnc-CTSL2-4	chr9:99918175-99918867	ENSG00000159712.9
22	lnc-CTSL2-5	chr9:99915509-99916020	NONHSAT133483
23	lnc-CTSL2-3	chr9:99958811-99958876	ENSG00000242375.1
24	lnc-CTSL2-4	chr9:99932889-99933018	ENSG00000159712.9
25	lnc-CTSL2-4	chr9:99962741-99962847	ENSG00000159712.9
26	lnc-CTSL2-4	chr9:99956985-99957122	ENSG00000159712.9
27	lnc-CTSL2-4	chr9:99940546-99940695	ENSG00000159712.9
28	lnc-CTSL2-5	chr9:99962757-99962847	ENSG00000203279.3
29	lnc-CTSL2-4	chr9:99967143-99967316	ENSG00000159712.9
30	lnc-CTSL2-5	chr9:99918814-99918867	NONHSAT133483
31	lnc-C9orf174-2	chr9:99974685-99974721	NONHSAT133490
32	lnc-CTSL2-4	chr9:99935228-99935342	ENSG00000159712.9
33	lnc-CTSL2-4	chr9:99924847-99925128	ENSG00000159712.9
34	lnc-CTSL2-5	chr9:99922464-99922684	NONHSAT133483
35	lnc-CTSL2-4	chr9:99949736-99949789	ENSG00000159712.9
36	lnc-CTSL2-6	chr9:99910243-99911530	NONHSAT133476

No data

Variant related genes	Relation type
RNU6-798P	TF binding region
ZNF322P1	TF binding region
ENSG00000242375	TF binding region
ENSG00000254876	TF binding region
ENSG00000255036	TF binding region
CCDC180	TF binding region
ENSG00000235494	TF binding region
ANKRD18CP	TF binding region
ENSG00000254483	TF binding region
RNU6-798P	CpG island
ZNF322P1	CpG island
ENSG00000242375	CpG island
ENSG00000254876	CpG island
ENSG00000255036	CpG island
CCDC180	CpG island
ENSG00000235494	CpG island
ANKRD18CP	CpG island
ENSG00000254483	CpG island
ENSG00000197816	chromatin interactions
ENSG00000254876	chromatin interactions
ENSG00000203279	chromatin interactions
ENSG00000254483	chromatin interactions
CHIC2	miRNA target sites

Extended variants
information (count: 3243 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:3243 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs13299950	chr9:99906545-99906546	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs71487309	chr9:99906563-99906564	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs138306105	chr9:99906583-99906584	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs142883844	chr9:99906622-99906623	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs576972602	chr9:99906645-99906646	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541119001	chr9:99906657-99906658	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs111334110	chr9:99906658-99906659	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs368926975	chr9:99906691-99906692	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs548202084	chr9:99906692-99906693	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs73543068	chr9:99906714-99906715	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs532053563	chr9:99906794-99906795	Strong transcription Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs550058548	chr9:99906826-99906827	Strong transcription Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
13	rs571514067	chr9:99906877-99906878	Strong transcription Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs538886003	chr9:99906947-99906948	Strong transcription Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs547480789	chr9:99906953-99906954	Strong transcription Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
16	rs186913750	chr9:99907095-99907096	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs139136108	chr9:99907136-99907137	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs371400008	chr9:99907243-99907244	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs566599476	chr9:99907279-99907280	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs73543070	chr9:99907311-99907312	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs550024157	chr9:99907320-99907321	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs149520077	chr9:99907325-99907326	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs78856187	chr9:99907356-99907357	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs537361455	chr9:99907413-99907414	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs200268177	chr9:99907417-99907418	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs147949442	chr9:99907426-99907427	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs144056873	chr9:99907470-99907471	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs577109718	chr9:99907483-99907484	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs541255973	chr9:99907575-99907576	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs559474760	chr9:99907596-99907597	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs552973439	chr9:99907630-99907631	Genic enhancers Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs541433860	chr9:99907730-99907731	Genic enhancers Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs563298242	chr9:99907771-99907772	Genic enhancers Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs13301185	chr9:99907786-99907787	Genic enhancers Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs191602035	chr9:99907841-99907842	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs538157530	chr9:99907866-99907867	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs565282402	chr9:99907900-99907901	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs184115354	chr9:99907951-99907952	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs547602475	chr9:99907999-99908000	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs187339425	chr9:99908017-99908018	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs530218025	chr9:99908057-99908058	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs146662292	chr9:99908133-99908134	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs59536270	chr9:99908255-99908256	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs7041241	chr9:99908268-99908269	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs558871251	chr9:99908322-99908323	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs571538260	chr9:99908329-99908330	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs71499999	chr9:99908352-99908353	Genic enhancers Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs201665636	chr9:99908450-99908451	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs570793903	chr9:99908453-99908454	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs192999150	chr9:99908458-99908459	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
overgrowth syndrome	16570072	CNVD
Neurodevelopmental disorder	22521361	CNVD
Nicotine dependence	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:738 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:99889400-99908200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr9:99897800-99907600	Strong transcription	HUES48 Cell Line	embryonic stem cell
3	chr9:99898400-99908600	Strong transcription	HUES6 Cell Line	embryonic stem cell
4	chr9:99898800-99908000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
5	chr9:99900600-99908800	Strong transcription	H1 Cell Line	embryonic stem cell
6	chr9:99901000-99921000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr9:99901600-99907200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr9:99901600-99907400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr9:99901600-99907600	Weak transcription	Pancreas	Pancrea
10	chr9:99902200-99908800	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr9:99903400-99908200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
12	chr9:99904200-99908200	Strong transcription	HUES64 Cell Line	embryonic stem cell
13	chr9:99904600-99907600	Strong transcription	ES-I3 Cell Line	embryonic stem cell
14	chr9:99904600-99909400	Weak transcription	HepG2	liver
15	chr9:99905400-99907200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr9:99906200-99907200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr9:99906600-99908800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr9:99907200-99907400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr9:99907200-99907800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr9:99907200-99908200	Enhancers	Fetal Intestine Large	intestine
21	chr9:99907200-99908400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr9:99907200-99909200	Genic enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr9:99907400-99907600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr9:99907400-99907800	Enhancers	Ovary	ovary
25	chr9:99907400-99908600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
26	chr9:99907400-99912000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr9:99907600-99907800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr9:99907600-99907800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr9:99907600-99907800	Enhancers	Pancreas	Pancrea
30	chr9:99907600-99908000	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr9:99907600-99908400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr9:99907600-99908600	Genic enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr9:99907600-99913400	Genic enhancers	HUES48 Cell Line	embryonic stem cell
34	chr9:99907800-99908400	Enhancers	Primary B cells from peripheral blood	blood
35	chr9:99907800-99909000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr9:99907800-99911800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr9:99908000-99908600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr9:99908000-99909800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr9:99908200-99908400	Enhancers	Fetal Intestine Small	intestine
40	chr9:99908200-99908600	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr9:99908200-99908600	Weak transcription	Fetal Intestine Large	intestine
42	chr9:99908200-99908800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
43	chr9:99908200-99910000	Genic enhancers	iPS-20b Cell Line	embryonic stem cell
44	chr9:99908400-99911600	Weak transcription	Fetal Intestine Small	intestine
45	chr9:99908600-99909000	Genic enhancers	HUES64 Cell Line	embryonic stem cell
46	chr9:99908600-99909400	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr9:99908600-99909400	Genic enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr9:99908600-99909600	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chr9:99908600-99913000	Genic enhancers	HUES6 Cell Line	embryonic stem cell
50	chr9:99908600-99913600	Enhancers	Fetal Intestine Large	intestine

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