Variant report

Variant	nsv894110
Chromosome Location	chr9:136512515-136542868
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:284)
CpG islands
(count:489)
Chromatin interactive
region (count:34)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:284 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:136523744-136523833	HepG2	liver:	n/a	n/a
2	BACH1	chr9:136523856-136524290	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr9:136534562-136534677	H1-hESC	embryonic stem cell:	n/a	n/a
4	BRCA1	chr9:136522095-136522108	HepG2	liver:	n/a	n/a
5	BRCA1	chr9:136512610-136512613	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr9:136524014-136524140	Hela-S3	cervix:	n/a	chr9:136524109-136524120
7	CEBPB	chr9:136523948-136524147	HepG2	liver:	n/a	chr9:136524109-136524120
8	CEBPD	chr9:136523381-136524320	HepG2	liver:	n/a	n/a
9	CHD2	chr9:136523633-136523998	HepG2	liver:	n/a	n/a
10	CHD2	chr9:136523850-136524056	Hela-S3	cervix:	n/a	n/a
11	CTBP2	chr9:136534359-136535043	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr9:136521652-136521882	HepG2	liver:	n/a	n/a
13	CTCF	chr9:136529755-136530185	MCF-7	breast:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
14	CTCF	chr9:136529922-136530043	Fibrobl	skin:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
15	CTCF	chr9:136529920-136530070	HA-sp	spinal cord:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
16	CTCF	chr9:136529882-136530092	MCF-7	breast:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
17	CTCF	chr9:136529900-136530050	HBMEC	blood vessel:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
18	CTCF	chr9:136529914-136530003	GM20000	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
19	CTCF	chr9:136529940-136530090	HFF-Myc	foreskin:	n/a	chr9:136529963-136529976
20	CTCF	chr9:136529959-136530025	Lung_OC	lung:	n/a	chr9:136529963-136529976
21	CTCF	chr9:136529894-136530071	Gliobla	brain:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
22	CTCF	chr9:136529900-136530050	HPAF	blood vessel:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
23	CTCF	chr9:136529880-136530030	GM12875	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
24	CTCF	chr9:136522540-136522712	Kidney_OC	kidney:	n/a	n/a
25	CTCF	chr9:136529900-136530050	BE2_C	brain:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
26	CTCF	chr9:136529955-136530017	GM13977	blood:	n/a	chr9:136529963-136529976
27	CTCF	chr9:136529880-136530030	BE2_C	brain:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
28	CTCF	chr9:136529906-136530079	H1-hESC	embryonic stem cell:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
29	CTCF	chr9:136529902-136530040	Hela-S3	cervix:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
30	CTCF	chr9:136529920-136530070	MCF-7	breast:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
31	CTCF	chr9:136529900-136530050	WERI-Rb-1	eye:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
32	CTCF	chr9:136529942-136529989	HepG2	liver:	n/a	chr9:136529963-136529976
33	CTCF	chr9:136521702-136521828	NHEK	skin:	n/a	n/a
34	CTCF	chr9:136529880-136530081	GM12892	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
35	CTCF	chr9:136529920-136530070	SK-N-SH_RA	brain:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
36	CTCF	chr9:136523000-136523150	BE2_C	brain:	n/a	n/a
37	CTCF	chr9:136529920-136530070	GM12878	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
38	CTCF	chr9:136529920-136530070	SAEC	small airway:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
39	CTCF	chr9:136529708-136530161	MCF-7	breast:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
40	CTCF	chr9:136521739-136521834	Spleen_OC	spleen:	n/a	n/a
41	CTCF	chr9:136529881-136530027	GM12878	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
42	CTCF	chr9:136529863-136530100	MCF-7	breast:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
43	CTCF	chr9:136529834-136530032	HepG2	liver:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
44	CTCF	chr9:136529840-136530130	GM12866	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
45	CTCF	chr9:136529891-136529925	K562	blood:	n/a	n/a
46	CTCF	chr9:136530000-136530150	GM12868	blood:	n/a	n/a
47	CTCF	chr9:136529860-136530010	AG09309	skin:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
48	CTCF	chr9:136529860-136530010	RPTEC	kidney:	n/a	chr9:136529963-136529976 chr9:136529939-136529947
49	CTCF	chr9:136521700-136521850	WERI-Rb-1	eye:	n/a	n/a
50	CTCF	chr9:136529877-136530077	GM12891	blood:	n/a	chr9:136529963-136529976 chr9:136529939-136529947

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:136539392-136539442	SK-N-SH	brain:	n/a
2	chr9:136539392-136539442	SK-N-SH	brain:	n/a
3	chr9:136537981-136538031	NH-A	brain:	n/a
4	chr9:136522927-136522977	NB4	blood:	n/a
5	chr9:136537981-136538031	HEK293	kidney:	embryo
6	chr9:136522662-136522712	NT2-D1	testis:	n/a
7	chr9:136539392-136539442	Jurkat	blood:	n/a
8	chr9:136537981-136538031	HRCEpiC	kidney:	n/a
9	chr9:136539392-136539442	Caco-2	colon:	n/a
10	chr9:136539392-136539442	NT2-D1	testis:	n/a
11	chr9:136539392-136539442	HPAEpiC	pulmonary alveolar:	n/a
12	chr9:136538372-136538422	HEEpiC	esophagus:	n/a
13	chr9:136539392-136539442	AoSMC	blood vessel:	n/a
14	chr9:136538372-136538422	HRCEpiC	kidney:	n/a
15	chr9:136537981-136538031	HCPEpiC	choroid plexus:	n/a
16	chr9:136538372-136538422	Caco-2	colon:	n/a
17	chr9:136537981-136538031	U87	brain:	n/a
18	chr9:136522716-136522766	GM12892	blood:	n/a
19	chr9:136522716-136522766	NH-A	brain:	n/a
20	chr9:136522927-136522977	A549	lung:	n/a
21	chr9:136522927-136522977	HEK293	kidney:	embryo
22	chr9:136516616-136516666	IMR90	lung:	fetal
23	chr9:136522662-136522712	ProgFib	skin:	n/a
24	chr9:136537981-136538031	AG10803	skin:	n/a
25	chr9:136537981-136538031	T-47D	breast:	n/a
26	chr9:136522716-136522766	HCM	heart:	n/a
27	chr9:136516616-136516666	SK-N-SH_RA	brain:	n/a
28	chr9:136522927-136522977	AoSMC	blood vessel:	n/a
29	chr9:136522716-136522766	HL-60	blood:	n/a
30	chr9:136537981-136538031	A549	lung:	n/a
31	chr9:136522927-136522977	AG09319	gingival:	n/a
32	chr9:136538372-136538422	HRE	kidney:	n/a
33	chr9:136520852-136520902	Hepatocyte	liver:	n/a
34	chr9:136537981-136538031	AG09309	skin:	n/a
35	chr9:136520852-136520902	HAEpiC	amniotic membrane:	n/a
36	chr9:136522662-136522712	CMK	blood:	n/a
37	chr9:136520852-136520902	BJ	skin:	n/a
38	chr9:136522662-136522712	AG10803	skin:	n/a
39	chr9:136516616-136516666	AG04450	lung:	fetal
40	chr9:136522927-136522977	GM12891	blood:	n/a
41	chr9:136539392-136539442	AG09309	skin:	n/a
42	chr9:136538372-136538422	PFSK-1	brain:	n/a
43	chr9:136520852-136520902	SAEC	small airway:	n/a
44	chr9:136522927-136522977	PANC-1	pancreas:	n/a
45	chr9:136522716-136522766	NB4	blood:	n/a
46	chr9:136522662-136522712	U87	brain:	n/a
47	chr9:136522716-136522766	ProgFib	skin:	n/a
48	chr9:136522662-136522712	HRPEpiC	eye:	n/a
49	chr9:136522927-136522977	NHBE	bronchial:	n/a
50	chr9:136538372-136538422	NH-A	brain:	n/a

(count:34 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:136524956..136527895-chr9:136529322..136531931,3	MCF-7	breast:
2	chr9:136514740..136517614-chr9:136519360..136521535,2	K562	blood:
3	chr9:136518974..136521399-chr9:136523004..136525968,3	K562	blood:
4	chr9:136521310..136521871-chr9:136591160..136591908,2	MCF-7	breast:
5	chr9:136528592..136530737-chr9:136533318..136534835,2	K562	blood:
6	chr9:136510698..136512936-chr9:136554635..136557267,2	MCF-7	breast:
7	chr9:136500673..136503407-chr9:136511410..136514325,2	MCF-7	breast:
8	chr9:136528532..136530062-chr9:136535645..136537164,2	K562	blood:
9	chr22:50714348..50715426-chr9:136539069..136540069,7	MCF-7	breast:
10	chr9:136397976..136398826-chr9:136528405..136529390,2	MCF-7	breast:
11	chr9:136528592..136530737-chr9:136533318..136534835,2	K562	blood:
12	chr9:136514740..136517614-chr9:136519360..136521535,2	K562	blood:
13	chr9:136528532..136530062-chr9:136535645..136537164,2	K562	blood:
14	chr9:136533491..136538951-chr9:136540367..136544630,5	MCF-7	breast:
15	chr9:136536158..136538637-chr9:136540445..136542494,2	K562	blood:
16	chr9:136523144..136526065-chr9:136527921..136530216,2	MCF-7	breast:
17	chr9:136523144..136526065-chr9:136527921..136530216,2	MCF-7	breast:
18	chr9:136531219..136533253-chr9:136536385..136539171,2	K562	blood:
19	chr9:136524956..136527895-chr9:136529322..136531931,3	MCF-7	breast:
20	chr9:136528562..136531390-chr9:136533335..136537164,3	K562	blood:
21	chr9:136492846..136495441-chr9:136522709..136525633,2	MCF-7	breast:
22	chr9:136528562..136531390-chr9:136533335..136537164,3	K562	blood:
23	chr9:136536158..136538637-chr9:136540445..136542494,2	K562	blood:
24	chr9:136533491..136538951-chr9:136540367..136544630,5	MCF-7	breast:
25	chr9:136520134..136522462-chr9:136523738..136526239,2	MCF-7	breast:
26	chr9:136541535..136544211-chr9:136557001..136558713,2	K562	blood:
27	chr9:136518974..136521399-chr9:136523004..136525968,3	K562	blood:
28	chr9:136541535..136543901-chr9:136557001..136558944,2	K562	blood:
29	chr9:136518974..136520647-chr9:136523004..136525968,2	K562	blood:
30	chr9:136518974..136520647-chr9:136523004..136525968,2	K562	blood:
31	chr9:136406344..136408415-chr9:136524304..136526688,2	MCF-7	breast:
32	chr9:136508750..136511596-chr9:136514989..136519879,4	K562	blood:
33	chr9:136514960..136517246-chr9:136545398..136548011,2	K562	blood:
34	chr9:136539587..136542544-chr9:136554397..136556598,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SARDH-1	chr9:136519317-136521659	NONHSAT135333
2	lnc-FAM163B-2	chr9:136531857-136532245	NONHSAT135335
3	lnc-SARDH-1	chr9:136522249-136522530	NR_102735
4	lnc-SARDH-1	chr9:136519709-136521659	NR_102735
5	lnc-SARDH-1	chr9:136519708-136521659	ENSG00000225756.1
6	lnc-SARDH-1	chr9:136522249-136522435	ENSG00000225756.1
7	lnc-SARDH-1	chr9:136519271-136521659	NONHSAT135332
8	lnc-SARDH-1	chr9:136519708-136522571	NONHSAT135334
9	lnc-FAM163B-2	chr9:136529094-136529136	NONHSAT135335
10	lnc-SARDH-1	chr9:136522249-136524916	NONHSAT135333
11	lnc-SARDH-1	chr9:136522216-136525145	NONHSAT135332
12	lnc-VAV2-4	chr9:136537139-136537213	NONHSAT135336
13	lnc-SARDH-1	chr9:136522611-136522653	NONHSAT135334

No data

Variant related genes	Relation type
DBH-AS1	TF binding region
SARDH	TF binding region
DBH-AS1	CpG island
SARDH	CpG island
ENSG00000123454	chromatin interactions
ENSG00000123453	chromatin interactions
ENSG00000225756	chromatin interactions

Extended variants
information (count: 1821 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:1821 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2797853	chr9:136512515-136512516	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs577693733	chr9:136512549-136512550	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs544589805	chr9:136512550-136512551	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs556579332	chr9:136512581-136512582	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs575531717	chr9:136512611-136512612	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs542868457	chr9:136512640-136512641	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs137940656	chr9:136512641-136512642	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs528653954	chr9:136512654-136512655	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs540496379	chr9:136512658-136512659	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs142419418	chr9:136512676-136512677	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs377200561	chr9:136512723-136512724	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs3025410	chr9:136512736-136512737	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs550988870	chr9:136512739-136512740	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs569226819	chr9:136512743-136512744	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs144653396	chr9:136512756-136512757	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs549225358	chr9:136512766-136512767	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs567470945	chr9:136512771-136512772	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs534794856	chr9:136512772-136512773	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs552927287	chr9:136512810-136512811	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs142937719	chr9:136512839-136512840	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs559490825	chr9:136512842-136512843	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs538394186	chr9:136512846-136512847	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs563876085	chr9:136512855-136512856	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs3025411	chr9:136512906-136512907	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs371329687	chr9:136512912-136512913	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs368526002	chr9:136512919-136512920	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs200156793	chr9:136512936-136512937	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs372914149	chr9:136512937-136512938	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs199926239	chr9:136512962-136512963	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs45439392	chr9:136512970-136512971	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs369664655	chr9:136512971-136512972	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs267606761	chr9:136512976-136512977	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs565384089	chr9:136512989-136512990	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs202213535	chr9:136512992-136512993	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs372772330	chr9:136512998-136512999	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs151174779	chr9:136513018-136513019	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs140171769	chr9:136513019-136513020	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs201759717	chr9:136513026-136513027	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs368994366	chr9:136513027-136513028	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs75215331	chr9:136513028-136513029	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs200103371	chr9:136513037-136513038	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs375806157	chr9:136513058-136513059	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs370974965	chr9:136513059-136513060	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs373518838	chr9:136513081-136513082	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs77984399	chr9:136513082-136513083	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs548319420	chr9:136513089-136513090	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs200281127	chr9:136513090-136513091	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs370844365	chr9:136513095-136513096	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs374568498	chr9:136513107-136513108	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs546771143	chr9:136513108-136513109	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Melanoma	18172304	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Kleefstra Syndrome	21538692	CNVD
Disorders of sex development	22290220	CNVD
Cancer	21183584	CNVD
Chronic myelomonocytic leukemia	16760666	CNVD
Abnormal phenotypes	18644119	CNVD
Ovarian cancer	21720365	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21364760	CNVD
Cancer	20581869	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Hepatocellular carcinoma	22174799	CNVD
Bladder cancer	21909424	CNVD
Cancer	17160897	CNVD
Ependymoma	20639864	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	20932292	CNVD
T-cell lymphomas	22341440	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:643 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136507600-136512600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr9:136508800-136514600	Weak transcription	Spleen	Spleen
3	chr9:136511400-136512800	Weak transcription	Pancreas	Pancrea
4	chr9:136512000-136512600	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr9:136512000-136512800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr9:136512000-136513400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr9:136512200-136513000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
8	chr9:136512400-136512600	Enhancers	Fetal Thymus	thymus
9	chr9:136512400-136512800	Enhancers	Primary T cells from cord blood	blood
10	chr9:136512400-136512800	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr9:136512600-136513000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
12	chr9:136513000-136513200	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr9:136513000-136513200	Enhancers	Pancreas	Pancrea
14	chr9:136513000-136513400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr9:136513200-136513400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
16	chr9:136513400-136513600	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr9:136513400-136514800	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr9:136513400-136516200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr9:136514400-136515400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr9:136514600-136515000	ZNF genes & repeats	Spleen	Spleen
21	chr9:136514800-136515000	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr9:136515000-136523400	Weak transcription	Spleen	Spleen
23	chr9:136516200-136516400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr9:136516200-136517000	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr9:136517000-136517200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr9:136517200-136520000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr9:136518400-136519000	Bivalent Enhancer	HepG2	liver
28	chr9:136518600-136518800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
29	chr9:136518600-136518800	Enhancers	Liver	Liver
30	chr9:136518600-136518800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
31	chr9:136518800-136519000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr9:136519600-136520200	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr9:136519600-136521200	Enhancers	Primary T cells from cord blood	blood
34	chr9:136520000-136521600	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr9:136520000-136522000	Bivalent Enhancer	Fetal Thymus	thymus
36	chr9:136520200-136520400	Enhancers	H9 Cell Line	embryonic stem cell
37	chr9:136520200-136520400	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
38	chr9:136520200-136520400	Bivalent Enhancer	HMEC	breast
39	chr9:136520200-136520600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr9:136520200-136520600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr9:136520200-136521000	Enhancers	H1 Cell Line	embryonic stem cell
42	chr9:136520200-136521800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
43	chr9:136520200-136521800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
44	chr9:136520200-136522400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr9:136520200-136522800	Enhancers	Brain Germinal Matrix	brain
46	chr9:136520200-136524200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
47	chr9:136520400-136520600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
48	chr9:136520400-136520600	Enhancers	Primary T helper naive cells from peripheral blood	blood
49	chr9:136520400-136520600	Enhancers	Primary T helper cells fromperipheralblood	blood
50	chr9:136520400-136521200	Bivalent Enhancer	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links