Variant report

Variant	nsv894653
Chromosome Location	chr9:140228092-140343189
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3619)
CpG islands
(count:4585)
Chromatin interactive
region (count:261)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3619 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140339748-140340324	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:140317508-140317871	K562	blood:	n/a	n/a
3	ARID3A	chr9:140317481-140317856	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:140301574-140301620	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:140336023-140336143	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:140339716-140339973	K562	blood:	n/a	n/a
7	ARID3A	chr9:140299979-140300230	K562	blood:	n/a	n/a
8	ARID3A	chr9:140316511-140316534	K562	blood:	n/a	n/a
9	ATF2	chr9:140317460-140317812	GM12878	blood:	n/a	n/a
10	ATF2	chr9:140302365-140302686	GM12878	blood:	n/a	n/a
11	ATF2	chr9:140306068-140306562	GM12878	blood:	n/a	n/a
12	ATF2	chr9:140339754-140340081	GM12878	blood:	n/a	n/a
13	ATF2	chr9:140339651-140340225	GM12878	blood:	n/a	n/a
14	ATF2	chr9:140335825-140336079	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr9:140317505-140317818	GM12878	blood:	n/a	n/a
16	ATF3	chr9:140324693-140324963	K562	blood:	n/a	n/a
17	ATF3	chr9:140317476-140317812	A549	lung:	n/a	chr9:140317720-140317729
18	ATF3	chr9:140330418-140330732	K562	blood:	n/a	n/a
19	ATF3	chr9:140319258-140319566	K562	blood:	n/a	chr9:140319424-140319433
20	ATF3	chr9:140339735-140340110	K562	blood:	n/a	n/a
21	ATF3	chr9:140317441-140317859	A549	lung:	n/a	chr9:140317720-140317729 chr9:140317446-140317455
22	ATF3	chr9:140306189-140306420	K562	blood:	n/a	n/a
23	ATF3	chr9:140306174-140306476	K562	blood:	n/a	n/a
24	ATF3	chr9:140330483-140330784	K562	blood:	n/a	n/a
25	ATF3	chr9:140339807-140340056	K562	blood:	n/a	n/a
26	BACH1	chr9:140301407-140301714	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:140300108-140300335	K562	blood:	n/a	chr9:140300194-140300208
28	BACH1	chr9:140335816-140336283	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:140317583-140317735	K562	blood:	n/a	n/a
30	BACH1	chr9:140277702-140277850	K562	blood:	n/a	n/a
31	BACH1	chr9:140317451-140317819	H1-hESC	embryonic stem cell:	n/a	n/a
32	BATF	chr9:140296574-140296769	GM12878	blood:	n/a	n/a
33	BATF	chr9:140339767-140340162	GM12878	blood:	n/a	n/a
34	BATF	chr9:140317557-140317813	GM12878	blood:	n/a	n/a
35	BATF	chr9:140306168-140306457	GM12878	blood:	n/a	n/a
36	BATF	chr9:140339791-140340143	GM12878	blood:	n/a	n/a
37	BATF	chr9:140249872-140250240	GM12878	blood:	n/a	n/a
38	BATF	chr9:140306192-140306339	GM12878	blood:	n/a	n/a
39	BCL11A	chr9:140306200-140306373	GM12878	blood:	n/a	n/a
40	BCL11A	chr9:140306194-140306473	GM12878	blood:	n/a	n/a
41	BCL11A	chr9:140302297-140302669	GM12878	blood:	n/a	chr9:140302333-140302342 chr9:140302350-140302359
42	BCL11A	chr9:140317564-140317705	GM12878	blood:	n/a	n/a
43	BCL11A	chr9:140301658-140301984	GM12878	blood:	n/a	chr9:140301745-140301758 chr9:140301743-140301756 chr9:140301742-140301755
44	BCL11A	chr9:140249823-140250213	GM12878	blood:	n/a	n/a
45	BCL3	chr9:140306157-140306593	A549	lung:	n/a	n/a
46	BCL3	chr9:140301284-140301915	GM12878	blood:	n/a	chr9:140301745-140301758 chr9:140301743-140301756 chr9:140301742-140301755 chr9:140301448-140301457
47	BCL3	chr9:140301532-140302088	A549	lung:	n/a	chr9:140301745-140301758 chr9:140301743-140301756 chr9:140301742-140301755
48	BCL3	chr9:140317410-140317871	GM12878	blood:	n/a	chr9:140317721-140317730
49	BCL3	chr9:140317382-140317934	A549	lung:	n/a	chr9:140317721-140317730
50	BCL3	chr9:140317480-140317887	A549	lung:	n/a	chr9:140317721-140317730

(count:4585 , 50 per page) page: 1 2 3 4 5 6 7 ... 92

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140262499-140262549	Hela-S3	cervix:	n/a
2	chr9:140301079-140301129	HEEpiC	esophagus:	n/a
3	chr9:140275263-140275313	BJ	skin:	n/a
4	chr9:140272991-140273041	HIPEpiC	eye:	n/a
5	chr9:140265575-140265625	HNPCEpiC	eye:	n/a
6	chr9:140333139-140333189	HRCEpiC	kidney:	n/a
7	chr9:140333805-140333855	ProgFib	skin:	n/a
8	chr9:140325583-140325633	AG04449	skin:	fetal
9	chr9:140261971-140262021	NHBE	bronchial:	n/a
10	chr9:140333139-140333189	GM19239	blood:	n/a
11	chr9:140262499-140262549	Hela-S3	cervix:	n/a
12	chr9:140301079-140301129	HEEpiC	esophagus:	n/a
13	chr9:140275263-140275313	BJ	skin:	n/a
14	chr9:140272991-140273041	HIPEpiC	eye:	n/a
15	chr9:140265575-140265625	HNPCEpiC	eye:	n/a
16	chr9:140333139-140333189	HRCEpiC	kidney:	n/a
17	chr9:140333805-140333855	ProgFib	skin:	n/a
18	chr9:140325583-140325633	AG04449	skin:	fetal
19	chr9:140261971-140262021	NHBE	bronchial:	n/a
20	chr9:140333139-140333189	GM19239	blood:	n/a
21	chr9:140265575-140265625	AG04449	skin:	fetal
22	chr9:140248465-140248515	U87	brain:	n/a
23	chr9:140312446-140312496	HUVEC	blood vessel:	n/a
24	chr9:140248465-140248515	AG04449	skin:	fetal
25	chr9:140340778-140340828	IMR90	lung:	fetal
26	chr9:140248465-140248515	HRPEpiC	eye:	n/a
27	chr9:140327546-140327596	HPAEpiC	pulmonary alveolar:	n/a
28	chr9:140270145-140270195	HCF	heart:	n/a
29	chr9:140301493-140301543	HPAEpiC	pulmonary alveolar:	n/a
30	chr9:140247487-140247537	SK-N-SH_RA	brain:	n/a
31	chr9:140268681-140268731	Jurkat	blood:	n/a
32	chr9:140336654-140336704	SK-N-SH_RA	brain:	n/a
33	chr9:140312446-140312496	HPAEpiC	pulmonary alveolar:	n/a
34	chr9:140311437-140311487	AoSMC	blood vessel:	n/a
35	chr9:140312446-140312496	GM06990	blood:	n/a
36	chr9:140268639-140268689	AG04450	lung:	fetal
37	chr9:140308660-140308710	AG09319	gingival:	n/a
38	chr9:140293439-140293489	GM06990	blood:	n/a
39	chr9:140301825-140301875	SKMC	muscle:	n/a
40	chr9:140266057-140266107	BJ	skin:	n/a
41	chr9:140262499-140262549	HPAEpiC	pulmonary alveolar:	n/a
42	chr9:140336227-140336277	SK-N-SH	brain:	n/a
43	chr9:140302117-140302167	AG04450	lung:	fetal
44	chr9:140317011-140317061	BJ	skin:	n/a
45	chr9:140247365-140247415	MCF10A-Er-Src	breast:	n/a
46	chr9:140310081-140310131	PFSK-1	brain:	n/a
47	chr9:140293395-140293445	HCM	heart:	n/a
48	chr9:140297969-140298019	MCF-7	breast:	n/a
49	chr9:140291701-140291751	ProgFib	skin:	n/a
50	chr9:140340778-140340828	LNCaP	prostate:	n/a

(count:261 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr9:140188984..140190605-chr9:140340342..140342042,2	K562	blood:
2	chr9:140249177..140251029-chr9:140284557..140286815,2	K562	blood:
3	chr9:140276422..140278471-chr9:140280851..140285397,4	K562	blood:
4	chr9:140292227..140294943-chr9:140297243..140300289,3	K562	blood:
5	chr9:140298287..140300117-chr9:140302067..140304056,2	K562	blood:
6	chr9:140134622..140137147-chr9:140240208..140242718,2	K562	blood:
7	chr9:140266934..140268514-chr9:140308947..140311728,2	K562	blood:
8	chr9:140260305..140263599-chr9:140266800..140269315,4	K562	blood:
9	chr9:140301252..140303993-chr9:140309634..140311661,2	K562	blood:
10	chr9:140193770..140200081-chr9:140338433..140344074,9	MCF-7	breast:
11	chr9:140191868..140203757-chr9:140310976..140322315,40	MCF-7	breast:
12	chr9:140195549..140197799-chr9:140267401..140270327,3	MCF-7	breast:
13	chr9:140311851..140314312-chr9:140315022..140317602,2	MCF-7	breast:
14	chr9:140135352..140138332-chr9:140324812..140326408,2	K562	blood:
15	chr9:140336000..140341073-chr9:140346212..140348839,4	MCF-7	breast:
16	chr9:140317349..140318505-chr9:140339431..140340433,7	K562	blood:
17	chr9:140279815..140282526-chr9:140298583..140300271,2	K562	blood:
18	chr9:140278374..140279989-chr9:140322326..140324784,2	K562	blood:
19	chr9:140281259..140283408-chr9:140284559..140287258,2	K562	blood:
20	chr9:140301252..140303993-chr9:140309634..140311661,2	K562	blood:
21	chr9:140147330..140150552-chr9:140310655..140312947,3	MCF-7	breast:
22	chr9:140268197..140270089-chr9:140278301..140280885,2	K562	blood:
23	chr9:140193601..140195804-chr9:140241049..140242704,2	MCF-7	breast:
24	chr9:140317565..140318277-chr9:140339425..140340227,3	MCF-7	breast:
25	chr9:140272897..140276314-chr9:140277329..140281755,5	K562	blood:
26	chr9:140303031..140307861-chr9:140316040..140320637,6	MCF-7	breast:
27	chr9:140194156..140197751-chr9:140306166..140310593,5	K562	blood:
28	chr9:140277926..140279737-chr9:140291409..140293739,2	K562	blood:
29	chr9:140309612..140312121-chr9:140339396..140342305,2	K562	blood:
30	chr9:140263053..140266191-chr9:140266966..140270158,4	MCF-7	breast:
31	chr9:140189146..140192137-chr9:140333598..140337290,3	K562	blood:
32	chr9:140334848..140337277-chr9:140353292..140355105,2	MCF-7	breast:
33	chr9:139619134..139621860-chr9:140316424..140318668,2	MCF-7	breast:
34	chr9:140290070..140291826-chr9:140296490..140298015,2	MCF-7	breast:
35	chr9:140315974..140319216-chr9:140351199..140355551,4	MCF-7	breast:
36	chr9:140316449..140319245-chr9:140352297..140354187,2	K562	blood:
37	chr9:140189738..140190666-chr9:140339488..140340122,3	MCF-7	breast:
38	chr9:140283597..140286256-chr9:140289637..140291579,2	K562	blood:
39	chr9:140289782..140292547-chr9:140316829..140318339,2	K562	blood:
40	chr9:140191919..140194060-chr9:140241729..140243371,2	K562	blood:
41	chr9:140193656..140198673-chr9:140329050..140337375,14	K562	blood:
42	chr9:140281259..140283408-chr9:140284559..140287258,2	K562	blood:
43	chr9:140330654..140334741-chr9:140346905..140349971,3	MCF-7	breast:
44	chr9:140265240..140267406-chr9:140321956..140324007,2	MCF-7	breast:
45	chr17:33478168..33478671-chr9:140316687..140317207,2	MCF-7	breast:
46	chr9:140328603..140331524-chr9:140339859..140341815,2	MCF-7	breast:
47	chr9:140189163..140189728-chr9:140339137..140339973,2	MCF-7	breast:
48	chr9:140144114..140146469-chr9:140324868..140328806,3	K562	blood:
49	chr9:140187746..140203383-chr9:140313735..140333462,78	MCF-7	breast:
50	chr9:140173193..140177984-chr9:140338841..140345205,7	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ENTPD8-2	chr9:140271526-140271675	NONHSAT135724
2	lnc-ENTPD8-2	chr9:140268832-140269215	NONHSAT135724
3	lnc-NOXA1-1	chr9:140273461-140273976	NONHSAT135726
4	lnc-NOXA1-1	chr9:140273304-140273326	NONHSAT135726

No data

Variant related genes	Relation type
EXD3	TF binding region
ENSG00000272272	TF binding region
ENTPD8	TF binding region
NOXA1	TF binding region
EXD3	CpG island
ENSG00000272272	CpG island
ENTPD8	CpG island
NOXA1	CpG island
ENSG00000130653	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000101210	chromatin interactions
ENSG00000160932	chromatin interactions
ENSG00000110321	chromatin interactions
ENSG00000188986	chromatin interactions
ENSG00000165716	chromatin interactions
ENSG00000272272	chromatin interactions
ENSG00000260996	chromatin interactions
ENSG00000197768	chromatin interactions
ENSG00000202538	chromatin interactions
ENSG00000123975	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000270259	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000187609	chromatin interactions
ENSG00000137806	chromatin interactions
ENSG00000247317	chromatin interactions
ENSG00000198435	chromatin interactions
ENSG00000148842	chromatin interactions
ENSG00000165802	chromatin interactions
ENSG00000105778	chromatin interactions
ENSG00000233016	chromatin interactions
ENSG00000188747	chromatin interactions
ENSG00000188833	chromatin interactions

Extended variants
information (count: 5887 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:5887 , 50 per page) page: 1 2 3 4 5 6 7 ... 118

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs34352018	chr9:140228092-140228093	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs367626772	chr9:140228111-140228112	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs556663320	chr9:140228132-140228133	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs573713588	chr9:140228157-140228158	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs141426011	chr9:140228178-140228179	Weak transcription Enhancers Strong transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs553859916	chr9:140228230-140228231	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs112366701	chr9:140228285-140228286	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs573031161	chr9:140228286-140228287	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs368497695	chr9:140228298-140228299	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs544887323	chr9:140228312-140228313	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs565348380	chr9:140228363-140228364	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs111985592	chr9:140228365-140228366	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs544719621	chr9:140228381-140228382	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs181211498	chr9:140228423-140228424	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs530073256	chr9:140228435-140228436	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs539482188	chr9:140228440-140228441	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs560416672	chr9:140228452-140228453	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs564734757	chr9:140228461-140228462	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs532696752	chr9:140228485-140228486	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs558892673	chr9:140228486-140228487	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs552511094	chr9:140228514-140228515	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569463517	chr9:140228537-140228538	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs536734237	chr9:140228556-140228557	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs550735893	chr9:140228600-140228601	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs575858760	chr9:140228603-140228604	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs567267841	chr9:140228607-140228608	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs536260028	chr9:140228611-140228612	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs34468235	chr9:140228616-140228617	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs140779552	chr9:140228642-140228643	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs573071836	chr9:140228645-140228646	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs113818112	chr9:140228655-140228656	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs558443608	chr9:140228674-140228675	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs117910012	chr9:140228677-140228678	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs111377253	chr9:140228723-140228724	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs574922727	chr9:140228734-140228735	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs554689093	chr9:140228776-140228777	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs60268068	chr9:140228805-140228806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs540240784	chr9:140228877-140228878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs535948914	chr9:140228878-140228879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs35231800	chr9:140228879-140228880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs372386880	chr9:140228963-140228964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs560379689	chr9:140228989-140228990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs112991551	chr9:140228999-140229000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs73581514	chr9:140229067-140229068	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs188275546	chr9:140229068-140229069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs562931765	chr9:140229105-140229106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs140260371	chr9:140229189-140229190	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs550650745	chr9:140229204-140229205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs180685795	chr9:140229218-140229219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs529680819	chr9:140229251-140229252	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Breast cancer	17603634	CNVD
Oral cancer	21386901	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Melanoma	18172304	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Kleefstra Syndrome	21538692	CNVD
Disorders of sex development	22290220	CNVD
Cancer	21183584	CNVD
Chronic myelomonocytic leukemia	16760666	CNVD
Abnormal phenotypes	18644119	CNVD
Ovarian cancer	21720365	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Hepatocellular carcinoma	22174799	CNVD
Breast cancer	21364760	CNVD
Idiopathic chronic pancreatitis	21572526	CNVD
Kleefstra syndrome	22670141	CNVD
Schizophrenia	22241247	CNVD
9q deletion syndrome	16826528	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Non-small cell lung cancer	21829676	CNVD
Non-syndromic sensorineural hearing loss	19293338	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Mantle cell lymphoma	19029149	CNVD
Cancer	20164920	CNVD
Breast cancer	21509527	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:3813 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140211400-140230200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr9:140212000-140242200	Weak transcription	Fetal Brain Female	brain
3	chr9:140212400-140240800	Weak transcription	Pancreas	Pancrea
4	chr9:140215800-140240800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr9:140215800-140243200	Weak transcription	Colonic Mucosa	Colon
6	chr9:140216400-140237000	Weak transcription	Lung	lung
7	chr9:140216400-140241000	Weak transcription	Spleen	Spleen
8	chr9:140216800-140240800	Weak transcription	Right Ventricle	heart
9	chr9:140217400-140237000	Weak transcription	Aorta	Aorta
10	chr9:140222000-140230400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr9:140222600-140241200	Weak transcription	Brain Substantia Nigra	brain
12	chr9:140222600-140241400	Weak transcription	Brain Angular Gyrus	brain
13	chr9:140222800-140230400	Weak transcription	Colon Smooth Muscle	Colon
14	chr9:140222800-140230800	Weak transcription	Fetal Intestine Large	intestine
15	chr9:140223000-140238800	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr9:140223400-140239200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr9:140225200-140233800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr9:140225800-140238800	Weak transcription	Stomach Smooth Muscle	stomach
19	chr9:140226000-140230800	Weak transcription	Ovary	ovary
20	chr9:140226400-140237000	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr9:140227400-140228200	Strong transcription	Fetal Stomach	stomach
22	chr9:140227400-140228800	Strong transcription	Fetal Intestine Small	intestine
23	chr9:140227400-140233400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr9:140227600-140228200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr9:140227600-140228200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr9:140227600-140228200	Weak transcription	Right Atrium	heart
27	chr9:140227800-140228200	Bivalent Enhancer	K562	blood
28	chr9:140228000-140228200	Enhancers	HUVEC	blood vessel
29	chr9:140228200-140230400	Weak transcription	Fetal Stomach	stomach
30	chr9:140228200-140230600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr9:140228200-140230600	Weak transcription	Primary hematopoietic stem cells	blood
32	chr9:140228800-140230600	Weak transcription	Fetal Intestine Small	intestine
33	chr9:140228800-140238800	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr9:140229400-140240800	Weak transcription	Liver	Liver
35	chr9:140229800-140230400	Weak transcription	Adipose Nuclei	Adipose
36	chr9:140230200-140231800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
37	chr9:140230400-140230800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr9:140230400-140230800	ZNF genes & repeats	Colon Smooth Muscle	Colon
39	chr9:140230400-140231000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr9:140230400-140231000	ZNF genes & repeats	Adipose Nuclei	Adipose
41	chr9:140230400-140231200	ZNF genes & repeats	Fetal Stomach	stomach
42	chr9:140230600-140231000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr9:140230600-140231000	ZNF genes & repeats	Fetal Intestine Small	intestine
44	chr9:140230600-140231200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
45	chr9:140230600-140231800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr9:140230600-140240200	Weak transcription	Fetal Brain Male	brain
47	chr9:140230800-140231000	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
48	chr9:140230800-140231000	ZNF genes & repeats	Brain Germinal Matrix	brain
49	chr9:140230800-140231000	ZNF genes & repeats	Fetal Lung	lung
50	chr9:140230800-140231000	ZNF genes & repeats	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links