Variant report

Variant	nsv894665
Chromosome Location	chr9:140469600-140523429
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4204)
CpG islands
(count:2139)
Chromatin interactive
region (count:168)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4204 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140514701-140514718	K562	blood:	n/a	n/a
2	ARID3A	chr9:140476704-140476869	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:140476767-140476847	K562	blood:	n/a	n/a
4	ARID3A	chr9:140512995-140513194	K562	blood:	n/a	n/a
5	ARID3A	chr9:140473271-140473827	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:140473269-140473545	K562	blood:	n/a	n/a
7	ATF1	chr9:140512908-140513272	K562	blood:	n/a	n/a
8	ATF1	chr9:140485031-140485339	K562	blood:	n/a	n/a
9	ATF1	chr9:140469909-140470724	K562	blood:	n/a	n/a
10	ATF2	chr9:140473015-140473621	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr9:140512846-140513342	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr9:140473265-140473580	GM12878	blood:	n/a	n/a
13	ATF2	chr9:140512882-140513291	GM12878	blood:	n/a	n/a
14	ATF2	chr9:140473133-140473657	GM12878	blood:	n/a	n/a
15	ATF2	chr9:140512599-140513361	GM12878	blood:	n/a	n/a
16	ATF2	chr9:140513019-140513356	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF3	chr9:140522958-140523491	GM12878	blood:	n/a	n/a
18	ATF3	chr9:140512666-140513485	A549	lung:	n/a	chr9:140513400-140513409
19	ATF3	chr9:140513171-140513459	H1-hESC	embryonic stem cell:	n/a	chr9:140513400-140513409
20	ATF3	chr9:140473293-140473650	K562	blood:	n/a	n/a
21	ATF3	chr9:140523164-140523326	GM12878	blood:	n/a	n/a
22	ATF3	chr9:140513089-140513438	A549	lung:	n/a	chr9:140513400-140513409
23	ATF3	chr9:140500314-140500576	K562	blood:	n/a	n/a
24	ATF3	chr9:140513192-140513485	HepG2	liver:	n/a	chr9:140513400-140513409
25	ATF3	chr9:140499555-140499816	K562	blood:	n/a	chr9:140499631-140499640
26	ATF3	chr9:140473017-140473719	A549	lung:	n/a	chr9:140473065-140473074
27	ATF3	chr9:140513263-140513470	GM12878	blood:	n/a	chr9:140513400-140513409
28	ATF3	chr9:140512941-140513477	K562	blood:	n/a	chr9:140513400-140513409
29	ATF3	chr9:140473135-140473716	A549	lung:	n/a	n/a
30	ATF3	chr9:140506272-140506563	K562	blood:	n/a	n/a
31	ATF3	chr9:140506242-140506580	K562	blood:	n/a	n/a
32	ATF3	chr9:140473254-140473601	K562	blood:	n/a	n/a
33	ATF3	chr9:140513079-140513492	K562	blood:	n/a	chr9:140513400-140513409
34	BACH1	chr9:140523076-140523260	K562	blood:	n/a	n/a
35	BACH1	chr9:140512354-140512455	K562	blood:	n/a	n/a
36	BACH1	chr9:140506296-140506570	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr9:140474840-140475003	K562	blood:	n/a	n/a
38	BACH1	chr9:140485179-140485711	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr9:140473308-140473703	H1-hESC	embryonic stem cell:	n/a	n/a
40	BATF	chr9:140473252-140473530	GM12878	blood:	n/a	n/a
41	BCL11A	chr9:140473285-140473555	GM12878	blood:	n/a	n/a
42	BCL3	chr9:140473015-140473655	GM12878	blood:	n/a	chr9:140473056-140473069
43	BCL3	chr9:140512432-140513462	GM12878	blood:	n/a	n/a
44	BCL3	chr9:140473114-140473744	A549	lung:	n/a	n/a
45	BCL3	chr9:140506032-140508286	A549	lung:	n/a	n/a
46	BCL3	chr9:140512082-140513429	A549	lung:	n/a	n/a
47	BCL3	chr9:140505934-140508793	A549	lung:	n/a	n/a
48	BCL3	chr9:140512554-140513408	A549	lung:	n/a	n/a
49	BCL3	chr9:140472964-140473771	A549	lung:	n/a	chr9:140473056-140473069
50	BCLAF1	chr9:140472999-140473658	K562	blood:	n/a	chr9:140473056-140473069

(count:2139 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140502926-140502976	MCF-7	breast:	n/a
2	chr9:140481498-140481548	Hepatocyte	liver:	n/a
3	chr9:140499397-140499447	GM06990	blood:	n/a
4	chr9:140485596-140485646	RPTEC	kidney:	n/a
5	chr9:140502926-140502976	MCF-7	breast:	n/a
6	chr9:140481498-140481548	Hepatocyte	liver:	n/a
7	chr9:140499397-140499447	GM06990	blood:	n/a
8	chr9:140485596-140485646	RPTEC	kidney:	n/a
9	chr9:140513113-140513163	RPTEC	kidney:	n/a
10	chr9:140473184-140473234	Hepatocyte	liver:	n/a
11	chr9:140499623-140499673	HEEpiC	esophagus:	n/a
12	chr9:140500037-140500087	Hela-S3	cervix:	n/a
13	chr9:140476961-140477011	HepG2	liver:	n/a
14	chr9:140473875-140473925	GM12878	blood:	n/a
15	chr9:140500037-140500087	AG10803	skin:	n/a
16	chr9:140473875-140473925	HEK293	kidney:	embryo
17	chr9:140500037-140500087	GM19239	blood:	n/a
18	chr9:140473606-140473656	SKMC	muscle:	n/a
19	chr9:140502926-140502976	HEEpiC	esophagus:	n/a
20	chr9:140499132-140499182	NH-A	brain:	n/a
21	chr9:140500813-140500863	IMR90	lung:	fetal
22	chr9:140515874-140515924	HUVEC	blood vessel:	n/a
23	chr9:140500813-140500863	HRCEpiC	kidney:	n/a
24	chr9:140500037-140500087	SKMC	muscle:	n/a
25	chr9:140483477-140483527	NHBE	bronchial:	n/a
26	chr9:140513113-140513163	HCF	heart:	n/a
27	chr9:140485596-140485646	AG09309	skin:	n/a
28	chr9:140500813-140500863	Jurkat	blood:	n/a
29	chr9:140500680-140500730	HCM	heart:	n/a
30	chr9:140501305-140501355	SAEC	small airway:	n/a
31	chr9:140499132-140499182	ovcar-3	ovarian:	n/a
32	chr9:140484847-140484897	MCF10A-Er-Src	breast:	n/a
33	chr9:140476961-140477011	GM12892	blood:	n/a
34	chr9:140500037-140500087	SK-N-MC	brain:	n/a
35	chr9:140512455-140512505	H1-hESC	embryonic stem cell:	embryo
36	chr9:140473184-140473234	Caco-2	colon:	n/a
37	chr9:140514016-140514066	U87	brain:	n/a
38	chr9:140500813-140500863	NHBE	bronchial:	n/a
39	chr9:140500208-140500258	ProgFib	skin:	n/a
40	chr9:140473184-140473234	IMR90	lung:	fetal
41	chr9:140513215-140513265	SK-N-SH_RA	brain:	n/a
42	chr9:140514016-140514066	HCT-116	colon:	n/a
43	chr9:140500208-140500258	A549	lung:	n/a
44	chr9:140484977-140485027	HUVEC	blood vessel:	n/a
45	chr9:140514016-140514066	H1-hESC	embryonic stem cell:	embryo
46	chr9:140473704-140473754	RPTEC	kidney:	n/a
47	chr9:140484977-140485027	AG04450	lung:	fetal
48	chr9:140483477-140483527	SK-N-SH	brain:	n/a
49	chr9:140515874-140515924	IMR90	lung:	fetal
50	chr9:140477134-140477184	HCM	heart:	n/a

(count:168 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:140482399..140489274-chr9:140503366..140510626,23	MCF-7	breast:
2	chr9:140444243..140447461-chr9:140473220..140477204,4	MCF-7	breast:
3	chr9:140443433..140448155-chr9:140497818..140502870,8	MCF-7	breast:
4	chr9:140473863..140476150-chr9:140498487..140501335,2	K562	blood:
5	chr9:140481402..140486615-chr9:140511490..140514947,5	K562	blood:
6	chr9:140512988..140515143-chr9:140515432..140518984,3	K562	blood:
7	chr9:140491597..140495041-chr9:140507018..140509391,3	MCF-7	breast:
8	chr9:140473487..140475608-chr9:140520167..140523048,2	K562	blood:
9	chr9:140477211..140479524-chr9:140496943..140498868,3	K562	blood:
10	chr9:140470526..140476841-chr9:140479974..140487037,14	MCF-7	breast:
11	chr9:140445084..140447863-chr9:140480393..140482885,2	MCF-7	breast:
12	chr9:140119502..140121788-chr9:140512732..140514255,2	MCF-7	breast:
13	chr9:140172197..140174221-chr9:140511916..140514176,2	K562	blood:
14	chr9:140513124..140515573-chr9:140519172..140522575,5	K562	blood:
15	chr9:140471797..140473910-chr9:140767835..140770122,2	K562	blood:
16	chr9:140443475..140446294-chr9:140484220..140486836,3	MCF-7	breast:
17	chr10:74033371..74034211-chr9:140484641..140485198,2	Hela-S3	cervix:
18	chr9:140463229..140465776-chr9:140474685..140477530,2	MCF-7	breast:
19	chr9:140470445..140476327-chr9:140498022..140503450,9	K562	blood:
20	chr9:140488494..140491209-chr9:140491658..140493363,3	MCF-7	breast:
21	chr9:140470600..140473358-chr9:140498484..140501413,2	K562	blood:
22	chr9:140470852..140475352-chr9:140511735..140515041,9	MCF-7	breast:
23	chr9:140353049..140355083-chr9:140500607..140502657,2	K562	blood:
24	chr9:140473011..140477060-chr9:140511720..140517022,6	K562	blood:
25	chr9:140444557..140448587-chr9:140470804..140473699,6	MCF-7	breast:
26	chr9:140443274..140446260-chr9:140471876..140474598,3	K562	blood:
27	chr9:140483300..140485633-chr9:140485903..140489005,3	MCF-7	breast:
28	chr9:140520368..140523590-chr9:140524404..140528000,5	K562	blood:
29	chr11:66609649..66612516-chr9:140514616..140517037,2	MCF-7	breast:
30	chr17:8059167..8059999-chr9:140506144..140506746,2	Hela-S3	cervix:
31	chr9:140487259..140491195-chr9:140511184..140515704,4	K562	blood:
32	chr2:219433435..219434245-chr9:140499709..140500590,2	Hela-S3	cervix:
33	chr9:140487365..140489362-chr9:140508586..140511499,3	K562	blood:
34	chr14:102023934..102026552-chr9:140506731..140509354,2	MCF-7	breast:
35	chr9:140487600..140490866-chr9:140491246..140493751,4	MCF-7	breast:
36	chr9:140481185..140483242-chr9:140565190..140566987,2	K562	blood:
37	chr9:140487223..140489967-chr9:140490391..140493317,2	K562	blood:
38	chr9:140488494..140491209-chr9:140491658..140493363,3	MCF-7	breast:
39	chr9:140512840..140515056-chr9:140515180..140517797,2	K562	blood:
40	chr9:140470864..140473169-chr9:140508209..140510262,2	K562	blood:
41	chr9:140469283..140475998-chr9:140510945..140517022,12	K562	blood:
42	chr17:56707742..56709303-chr9:140500647..140503505,2	MCF-7	breast:
43	chr9:140470445..140476327-chr9:140498022..140503450,9	K562	blood:
44	chr9:140491452..140494377-chr9:140498511..140500095,2	K562	blood:
45	chr9:140513748..140516192-chr9:140572995..140575836,2	MCF-7	breast:
46	chr9:140500723..140503070-chr9:140566116..140568927,3	K562	blood:
47	chr9:140515440..140517099-chr9:140525922..140527990,2	K562	blood:
48	chr9:140444055..140447780-chr9:140498087..140502451,7	MCF-7	breast:
49	chr14:67826020..67826820-chr9:140484636..140485558,2	Hela-S3	cervix:
50	chr9:140475531..140477283-chr9:140490504..140492982,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARRDC1-1	chr9:140477241-140479475	NONHSAT135743

No data

Variant related genes	Relation type
ZMYND19	TF binding region
ARRDC1	TF binding region
DPH7	TF binding region
EHMT1	TF binding region
C9orf37	TF binding region
ZMYND19	CpG island
ARRDC1	CpG island
DPH7	CpG island
EHMT1	CpG island
C9orf37	CpG island
ENSG00000263933	chromatin interactions
ENSG00000134001	chromatin interactions
ENSG00000141556	chromatin interactions
ENSG00000130653	chromatin interactions
ENSG00000173653	chromatin interactions
ENSG00000259642	chromatin interactions
ENSG00000100916	chromatin interactions
ENSG00000244968	chromatin interactions
ENSG00000169957	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000257028	chromatin interactions
ENSG00000113594	chromatin interactions
ENSG00000165802	chromatin interactions
ENSG00000226308	chromatin interactions
ENSG00000188986	chromatin interactions
ENSG00000239705	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000268996	chromatin interactions
ENSG00000090060	chromatin interactions
ENSG00000180953	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000258938	chromatin interactions
ENSG00000260806	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000134824	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000258498	chromatin interactions
ENSG00000167716	chromatin interactions
ENSG00000133858	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000044574	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000203987	chromatin interactions
ENSG00000148399	chromatin interactions
ENSG00000144580	chromatin interactions
ENSG00000165724	chromatin interactions
ENSG00000101144	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000176623	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000100554	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000198961	chromatin interactions
ENSG00000179094	chromatin interactions
ENSG00000177239	chromatin interactions
ENSG00000198113	chromatin interactions

Extended variants
information (count: 2325 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:2325 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2149561	chr9:140469600-140469601	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs572397257	chr9:140469601-140469602	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs77363400	chr9:140469620-140469621	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs558200130	chr9:140469639-140469640	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs578241072	chr9:140469687-140469688	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs544052325	chr9:140469733-140469734	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs563824767	chr9:140469735-140469736	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs576213081	chr9:140469806-140469807	Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs541984727	chr9:140469859-140469860	Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs199986927	chr9:140469927-140469928	Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs375265911	chr9:140469979-140469980	Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs186234063	chr9:140469991-140469992	Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs115293070	chr9:140470007-140470008	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs554932113	chr9:140470054-140470055	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs548262343	chr9:140470071-140470072	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs564247354	chr9:140470102-140470103	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs863701	chr9:140470119-140470120	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs549575338	chr9:140470138-140470139	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs190361518	chr9:140470152-140470153	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs374124993	chr9:140470173-140470174	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs181765268	chr9:140470179-140470180	Strong transcription Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs138385240	chr9:140470204-140470205	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs540682533	chr9:140470293-140470294	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs549767821	chr9:140470319-140470320	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs566148152	chr9:140470354-140470355	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs534723918	chr9:140470403-140470404	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
27	rs558104364	chr9:140470406-140470407	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
28	rs35636291	chr9:140470439-140470440	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs372395063	chr9:140470479-140470480	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
30	rs186458605	chr9:140470494-140470495	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs537697095	chr9:140470495-140470496	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs821315	chr9:140470497-140470498	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs574329558	chr9:140470520-140470521	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs148810716	chr9:140470548-140470549	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
35	rs145464883	chr9:140470549-140470550	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs3763611	chr9:140470564-140470565	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs147660025	chr9:140470597-140470598	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
38	rs377675012	chr9:140470603-140470604	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
39	rs139694147	chr9:140470607-140470608	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs563701329	chr9:140470608-140470609	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
41	rs138520650	chr9:140470637-140470638	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
42	rs376340762	chr9:140470647-140470648	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
43	rs144080263	chr9:140470658-140470659	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
44	rs370814331	chr9:140470668-140470669	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
45	rs183105278	chr9:140470669-140470670	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
46	rs529088460	chr9:140470673-140470674	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
47	rs549125337	chr9:140470680-140470681	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs186262224	chr9:140470685-140470686	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
49	rs528538970	chr9:140470699-140470700	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs371193848	chr9:140470729-140470730	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:4242 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140447200-140470200	Weak transcription	Stomach Mucosa	stomach
2	chr9:140447200-140471800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr9:140447400-140471800	Weak transcription	Small Intestine	intestine
4	chr9:140453000-140471400	Weak transcription	Fetal Brain Male	brain
5	chr9:140463000-140469800	Strong transcription	Liver	Liver
6	chr9:140463000-140469800	Strong transcription	Duodenum Mucosa	Duodenum
7	chr9:140463000-140469800	Strong transcription	Fetal Muscle Trunk	muscle
8	chr9:140463000-140470000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr9:140463000-140470000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr9:140463000-140470000	Strong transcription	Fetal Stomach	stomach
11	chr9:140463000-140471000	Strong transcription	H9 Cell Line	embryonic stem cell
12	chr9:140463000-140471000	Strong transcription	Fetal Intestine Small	intestine
13	chr9:140463000-140471400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr9:140463000-140471400	Strong transcription	Cortex derived primary cultured neurospheres	brain
15	chr9:140463000-140471600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr9:140463000-140471600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr9:140463200-140470400	Strong transcription	Primary T helper cells PMA-I stimulated	--
18	chr9:140463200-140470600	Strong transcription	Fetal Brain Female	brain
19	chr9:140463200-140471200	Strong transcription	A549	lung
20	chr9:140463200-140471600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr9:140463600-140470400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr9:140464200-140471000	Strong transcription	Thymus	Thymus
23	chr9:140464400-140470400	Strong transcription	HepG2	liver
24	chr9:140464600-140469800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr9:140464600-140469800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr9:140464600-140470200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr9:140464600-140471200	Strong transcription	Fetal Intestine Large	intestine
28	chr9:140464600-140471600	Strong transcription	HUES6 Cell Line	embryonic stem cell
29	chr9:140464600-140471600	Strong transcription	HUES64 Cell Line	embryonic stem cell
30	chr9:140464800-140469800	Strong transcription	NHEK	skin
31	chr9:140464800-140470000	Strong transcription	Placenta	Placenta
32	chr9:140464800-140470400	Strong transcription	HMEC	breast
33	chr9:140464800-140470600	Strong transcription	Gastric	stomach
34	chr9:140464800-140470800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr9:140464800-140470800	Strong transcription	Fetal Thymus	thymus
36	chr9:140464800-140470800	Strong transcription	Rectal Smooth Muscle	rectum
37	chr9:140464800-140471000	Strong transcription	H1 Cell Line	embryonic stem cell
38	chr9:140464800-140471000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr9:140464800-140471000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr9:140464800-140471000	Strong transcription	Rectal Mucosa Donor 31	rectum
41	chr9:140464800-140471200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr9:140464800-140471600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr9:140465000-140470200	Strong transcription	Spleen	Spleen
44	chr9:140465000-140471000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr9:140465000-140471200	Strong transcription	HUES48 Cell Line	embryonic stem cell
46	chr9:140465200-140470800	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr9:140465200-140471000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
48	chr9:140465400-140470800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
49	chr9:140465800-140471000	Strong transcription	Sigmoid Colon	Sigmoid Colon
50	chr9:140466000-140470200	Strong transcription	Adipose Nuclei	Adipose

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