Variant report

Variant	nsv894666
Chromosome Location	chr9:140470564-140518576
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4073)
CpG islands
(count:2138)
Chromatin interactive
region (count:153)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4073 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140473269-140473545	K562	blood:	n/a	n/a
2	ARID3A	chr9:140514701-140514718	K562	blood:	n/a	n/a
3	ARID3A	chr9:140476767-140476847	K562	blood:	n/a	n/a
4	ARID3A	chr9:140473271-140473827	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:140476704-140476869	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:140512995-140513194	K562	blood:	n/a	n/a
7	ATF1	chr9:140512908-140513272	K562	blood:	n/a	n/a
8	ATF1	chr9:140485031-140485339	K562	blood:	n/a	n/a
9	ATF1	chr9:140469909-140470724	K562	blood:	n/a	n/a
10	ATF2	chr9:140512846-140513342	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr9:140512882-140513291	GM12878	blood:	n/a	n/a
12	ATF2	chr9:140473265-140473580	GM12878	blood:	n/a	n/a
13	ATF2	chr9:140513019-140513356	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr9:140473015-140473621	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr9:140473133-140473657	GM12878	blood:	n/a	n/a
16	ATF2	chr9:140512599-140513361	GM12878	blood:	n/a	n/a
17	ATF3	chr9:140473135-140473716	A549	lung:	n/a	n/a
18	ATF3	chr9:140513089-140513438	A549	lung:	n/a	chr9:140513400-140513409
19	ATF3	chr9:140506242-140506580	K562	blood:	n/a	n/a
20	ATF3	chr9:140513079-140513492	K562	blood:	n/a	chr9:140513400-140513409
21	ATF3	chr9:140506272-140506563	K562	blood:	n/a	n/a
22	ATF3	chr9:140473254-140473601	K562	blood:	n/a	n/a
23	ATF3	chr9:140512666-140513485	A549	lung:	n/a	chr9:140513400-140513409
24	ATF3	chr9:140500314-140500576	K562	blood:	n/a	n/a
25	ATF3	chr9:140512941-140513477	K562	blood:	n/a	chr9:140513400-140513409
26	ATF3	chr9:140499555-140499816	K562	blood:	n/a	chr9:140499631-140499640
27	ATF3	chr9:140513263-140513470	GM12878	blood:	n/a	chr9:140513400-140513409
28	ATF3	chr9:140513192-140513485	HepG2	liver:	n/a	chr9:140513400-140513409
29	ATF3	chr9:140513171-140513459	H1-hESC	embryonic stem cell:	n/a	chr9:140513400-140513409
30	ATF3	chr9:140473293-140473650	K562	blood:	n/a	n/a
31	ATF3	chr9:140473017-140473719	A549	lung:	n/a	chr9:140473065-140473074
32	BACH1	chr9:140474840-140475003	K562	blood:	n/a	n/a
33	BACH1	chr9:140473308-140473703	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr9:140485179-140485711	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr9:140512354-140512455	K562	blood:	n/a	n/a
36	BACH1	chr9:140506296-140506570	H1-hESC	embryonic stem cell:	n/a	n/a
37	BATF	chr9:140473252-140473530	GM12878	blood:	n/a	n/a
38	BCL11A	chr9:140473285-140473555	GM12878	blood:	n/a	n/a
39	BCL3	chr9:140472964-140473771	A549	lung:	n/a	chr9:140473056-140473069
40	BCL3	chr9:140512432-140513462	GM12878	blood:	n/a	n/a
41	BCL3	chr9:140512082-140513429	A549	lung:	n/a	n/a
42	BCL3	chr9:140473015-140473655	GM12878	blood:	n/a	chr9:140473056-140473069
43	BCL3	chr9:140512554-140513408	A549	lung:	n/a	n/a
44	BCL3	chr9:140473114-140473744	A549	lung:	n/a	n/a
45	BCL3	chr9:140506032-140508286	A549	lung:	n/a	n/a
46	BCL3	chr9:140505934-140508793	A549	lung:	n/a	n/a
47	BCLAF1	chr9:140473010-140473659	GM12878	blood:	n/a	chr9:140473056-140473069
48	BCLAF1	chr9:140473078-140473697	K562	blood:	n/a	n/a
49	BCLAF1	chr9:140472999-140473658	K562	blood:	n/a	chr9:140473056-140473069
50	BCLAF1	chr9:140473000-140473748	GM12878	blood:	n/a	chr9:140473056-140473069

(count:2138 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140501305-140501355	U87	brain:	n/a
2	chr9:140513113-140513163	H1-hESC	embryonic stem cell:	embryo
3	chr9:140510480-140510530	AG04449	skin:	fetal
4	chr9:140501305-140501355	U87	brain:	n/a
5	chr9:140513113-140513163	H1-hESC	embryonic stem cell:	embryo
6	chr9:140510480-140510530	AG04449	skin:	fetal
7	chr9:140487898-140487948	HIPEpiC	eye:	n/a
8	chr9:140514016-140514066	IMR90	lung:	fetal
9	chr9:140483477-140483527	HCT-116	colon:	n/a
10	chr9:140485720-140485770	LNCaP	prostate:	n/a
11	chr9:140473606-140473656	AG04449	skin:	fetal
12	chr9:140487898-140487948	GM12892	blood:	n/a
13	chr9:140514016-140514066	NHBE	bronchial:	n/a
14	chr9:140484847-140484897	NB4	blood:	n/a
15	chr9:140512513-140512563	T-47D	breast:	n/a
16	chr9:140502926-140502976	Hepatocyte	liver:	n/a
17	chr9:140477134-140477184	NH-A	brain:	n/a
18	chr9:140513113-140513163	AG04450	lung:	fetal
19	chr9:140485720-140485770	NHDF-neo	bronchial:	n/a
20	chr9:140476961-140477011	GM06990	blood:	n/a
21	chr9:140499623-140499673	HIPEpiC	eye:	n/a
22	chr9:140512455-140512505	Jurkat	blood:	n/a
23	chr9:140477134-140477184	NHDF-neo	bronchial:	n/a
24	chr9:140473704-140473754	Hepatocyte	liver:	n/a
25	chr9:140514393-140514443	NHDF-neo	bronchial:	n/a
26	chr9:140499623-140499673	LNCaP	prostate:	n/a
27	chr9:140500208-140500258	PrEC	prostate:	n/a
28	chr9:140487898-140487948	T-47D	breast:	n/a
29	chr9:140473184-140473234	PrEC	prostate:	n/a
30	chr9:140499132-140499182	T-47D	breast:	n/a
31	chr9:140501305-140501355	AG04450	lung:	fetal
32	chr9:140500208-140500258	AG10803	skin:	n/a
33	chr9:140473545-140473595	LNCaP	prostate:	n/a
34	chr9:140514016-140514066	MCF-7	breast:	n/a
35	chr9:140485596-140485646	GM12892	blood:	n/a
36	chr9:140512815-140512865	HepG2	liver:	n/a
37	chr9:140512513-140512563	SAEC	small airway:	n/a
38	chr9:140513113-140513163	PFSK-1	brain:	n/a
39	chr9:140499623-140499673	AG09309	skin:	n/a
40	chr9:140512815-140512865	HRCEpiC	kidney:	n/a
41	chr9:140513113-140513163	HCT-116	colon:	n/a
42	chr9:140512513-140512563	PFSK-1	brain:	n/a
43	chr9:140484220-140484270	HEK293	kidney:	embryo
44	chr9:140514393-140514443	HPAEpiC	pulmonary alveolar:	n/a
45	chr9:140513113-140513163	HIPEpiC	eye:	n/a
46	chr9:140501305-140501355	AG09309	skin:	n/a
47	chr9:140484847-140484897	AG10803	skin:	n/a
48	chr9:140477134-140477184	BJ	skin:	n/a
49	chr9:140484847-140484897	SK-N-SH_RA	brain:	n/a
50	chr9:140512815-140512865	ECC-1	luminal epithelium:	n/a

(count:153 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:140511122..140512699-chr9:140559780..140561959,2	MCF-7	breast:
2	chr9:140473011..140477060-chr9:140511720..140517022,6	K562	blood:
3	chr9:140510252..140513201-chr9:140591330..140593988,2	MCF-7	breast:
4	chr9:140488494..140491209-chr9:140491658..140493363,3	MCF-7	breast:
5	chr9:140172197..140174221-chr9:140511916..140514176,2	K562	blood:
6	chr9:140512988..140515143-chr9:140515432..140518984,3	K562	blood:
7	chr9:140477224..140480187-chr9:140511285..140514759,4	MCF-7	breast:
8	chr14:96967956..96969589-chr9:140512244..140513858,2	MCF-7	breast:
9	chr9:140485234..140487017-chr9:140490927..140493336,2	MCF-7	breast:
10	chr9:140470600..140473358-chr9:140498484..140501413,2	K562	blood:
11	chr9:140482103..140484736-chr9:140493235..140494793,2	MCF-7	breast:
12	chr9:140135182..140137272-chr9:140472466..140474673,2	K562	blood:
13	chr10:60027871..60028772-chr9:140513692..140514235,2	Hela-S3	cervix:
14	chr9:140457953..140460745-chr9:140471921..140474546,2	K562	blood:
15	chr9:140481390..140486340-chr9:140509681..140515296,7	K562	blood:
16	chr17:8059167..8059999-chr9:140506144..140506746,2	Hela-S3	cervix:
17	chr9:140472065..140474628-chr9:140492745..140495141,2	MCF-7	breast:
18	chr9:140463229..140465776-chr9:140474685..140477530,2	MCF-7	breast:
19	chr9:140444995..140447677-chr9:140508337..140511208,2	MCF-7	breast:
20	chr9:140488494..140491209-chr9:140491658..140493363,3	MCF-7	breast:
21	chr9:140469278..140479132-chr9:140503165..140510984,27	MCF-7	breast:
22	chr9:140492027..140494879-chr9:140495137..140497726,4	K562	blood:
23	chr9:140443475..140446294-chr9:140484220..140486836,3	MCF-7	breast:
24	chr9:140444557..140448587-chr9:140470804..140473699,6	MCF-7	breast:
25	chr9:140476961..140479679-chr9:140498930..140501296,2	K562	blood:
26	chr9:140470852..140475352-chr9:140511735..140515041,9	MCF-7	breast:
27	chr17:56707742..56709303-chr9:140500647..140503505,2	MCF-7	breast:
28	chr9:140513748..140516192-chr9:140572995..140575836,2	MCF-7	breast:
29	chr9:140512926..140516965-chr9:140518236..140522251,5	MCF-7	breast:
30	chr9:140473011..140477060-chr9:140511720..140517022,6	K562	blood:
31	chr9:140513993..140515601-chr9:140519538..140521041,2	K562	blood:
32	chr16:30537615..30538179-chr9:140506214..140507038,2	Hela-S3	cervix:
33	chr9:140470526..140476841-chr9:140479974..140487037,14	MCF-7	breast:
34	chr9:128002978..128003976-chr9:140484864..140485791,2	Hela-S3	cervix:
35	chr9:140475531..140477283-chr9:140490504..140492982,2	K562	blood:
36	chr9:140443479..140444983-chr9:140499290..140501657,2	K562	blood:
37	chr9:140491597..140495041-chr9:140507018..140509391,3	MCF-7	breast:
38	chr10:74033371..74034211-chr9:140484641..140485198,2	Hela-S3	cervix:
39	chr9:140138222..140140007-chr9:140479470..140482098,2	K562	blood:
40	chr9:140444055..140447780-chr9:140498087..140502451,7	MCF-7	breast:
41	chr9:140147652..140150242-chr9:140468793..140471743,2	MCF-7	breast:
42	chr12:72057222..72057844-chr9:140506717..140507309,2	Hela-S3	cervix:
43	chr9:140510301..140512347-chr9:140541289..140543188,2	MCF-7	breast:
44	chr9:140482616..140489091-chr9:140495925..140503345,17	MCF-7	breast:
45	chr9:140444420..140448721-chr9:140471876..140474832,3	K562	blood:
46	chr17:73775349..73776145-chr9:140506201..140506865,3	Hela-S3	cervix:
47	chr9:140444844..140447325-chr9:140474749..140476683,2	MCF-7	breast:
48	chr14:67826020..67826820-chr9:140484636..140485558,2	Hela-S3	cervix:
49	chr9:140487223..140489967-chr9:140490391..140493317,2	K562	blood:
50	chr9:140492027..140494879-chr9:140495137..140497726,4	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARRDC1-1	chr9:140477241-140479475	NONHSAT135743

No data

Variant related genes	Relation type
ZMYND19	TF binding region
ARRDC1	TF binding region
EHMT1	TF binding region
C9orf37	TF binding region
DPH7	TF binding region
ZMYND19	CpG island
ARRDC1	CpG island
EHMT1	CpG island
C9orf37	CpG island
DPH7	CpG island
ENSG00000263933	chromatin interactions
ENSG00000180953	chromatin interactions
ENSG00000176623	chromatin interactions
ENSG00000100554	chromatin interactions
ENSG00000226308	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000134001	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000101144	chromatin interactions
ENSG00000169957	chromatin interactions
ENSG00000258498	chromatin interactions
ENSG00000239705	chromatin interactions
ENSG00000133858	chromatin interactions
ENSG00000198961	chromatin interactions
ENSG00000165802	chromatin interactions
ENSG00000148399	chromatin interactions
ENSG00000260806	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000179094	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000090060	chromatin interactions
ENSG00000188986	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000100916	chromatin interactions
ENSG00000268996	chromatin interactions
ENSG00000144580	chromatin interactions
ENSG00000244968	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000259642	chromatin interactions
ENSG00000165724	chromatin interactions
ENSG00000177239	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000044574	chromatin interactions
ENSG00000257028	chromatin interactions
ENSG00000141556	chromatin interactions
ENSG00000173653	chromatin interactions
ENSG00000198113	chromatin interactions
ENSG00000203987	chromatin interactions
ENSG00000258938	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000113594	chromatin interactions
ENSG00000167716	chromatin interactions
ENSG00000134824	chromatin interactions
ENSG00000130653	chromatin interactions

Extended variants
information (count: 2116 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:2116 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3763611	chr9:140470564-140470565	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
2	rs147660025	chr9:140470597-140470598	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
3	rs377675012	chr9:140470603-140470604	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
4	rs139694147	chr9:140470607-140470608	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
5	rs563701329	chr9:140470608-140470609	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
6	rs138520650	chr9:140470637-140470638	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
7	rs376340762	chr9:140470647-140470648	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
8	rs144080263	chr9:140470658-140470659	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
9	rs370814331	chr9:140470668-140470669	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
10	rs183105278	chr9:140470669-140470670	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
11	rs529088460	chr9:140470673-140470674	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
12	rs549125337	chr9:140470680-140470681	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
13	rs186262224	chr9:140470685-140470686	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
14	rs528538970	chr9:140470699-140470700	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs371193848	chr9:140470729-140470730	Strong transcription Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs374562652	chr9:140470834-140470835	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs551494446	chr9:140470889-140470890	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
18	rs571707078	chr9:140470901-140470902	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
19	rs537437341	chr9:140470972-140470973	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
20	rs532566663	chr9:140470997-140470998	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
21	rs373321725	chr9:140470998-140470999	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
22	rs13296380	chr9:140471023-140471024	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs191558541	chr9:140471049-140471050	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
24	rs567942731	chr9:140471072-140471073	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
25	rs552871204	chr9:140471080-140471081	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
26	rs574938465	chr9:140471081-140471082	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
27	rs569915065	chr9:140471098-140471099	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
28	rs182537353	chr9:140471099-140471100	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
29	rs569429978	chr9:140471137-140471138	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
30	rs557428856	chr9:140471176-140471177	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs577247987	chr9:140471215-140471216	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs821316	chr9:140471245-140471246	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs147306989	chr9:140471246-140471247	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs543959725	chr9:140471255-140471256	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs529158232	chr9:140471258-140471259	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs542460173	chr9:140471291-140471292	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs188054196	chr9:140471317-140471318	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs35318970	chr9:140471331-140471332	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs551895756	chr9:140471342-140471343	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs571745299	chr9:140471358-140471359	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs530960671	chr9:140471404-140471405	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs116820114	chr9:140471413-140471414	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
43	rs567965182	chr9:140471419-140471420	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs373056968	chr9:140471435-140471436	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
45	rs536912852	chr9:140471488-140471489	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
46	rs548595174	chr9:140471489-140471490	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
47	rs377364437	chr9:140471505-140471506	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
48	rs76977835	chr9:140471518-140471519	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
49	rs567100725	chr9:140471536-140471537	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
50	rs141490381	chr9:140471598-140471599	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:3903 , 50 per page) page: 1 2 3 4 5 6 7 ... 79

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140447200-140471800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr9:140447400-140471800	Weak transcription	Small Intestine	intestine
3	chr9:140453000-140471400	Weak transcription	Fetal Brain Male	brain
4	chr9:140463000-140471000	Strong transcription	H9 Cell Line	embryonic stem cell
5	chr9:140463000-140471000	Strong transcription	Fetal Intestine Small	intestine
6	chr9:140463000-140471400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr9:140463000-140471400	Strong transcription	Cortex derived primary cultured neurospheres	brain
8	chr9:140463000-140471600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr9:140463000-140471600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr9:140463200-140470600	Strong transcription	Fetal Brain Female	brain
11	chr9:140463200-140471200	Strong transcription	A549	lung
12	chr9:140463200-140471600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr9:140464200-140471000	Strong transcription	Thymus	Thymus
14	chr9:140464600-140471200	Strong transcription	Fetal Intestine Large	intestine
15	chr9:140464600-140471600	Strong transcription	HUES6 Cell Line	embryonic stem cell
16	chr9:140464600-140471600	Strong transcription	HUES64 Cell Line	embryonic stem cell
17	chr9:140464800-140470600	Strong transcription	Gastric	stomach
18	chr9:140464800-140470800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr9:140464800-140470800	Strong transcription	Fetal Thymus	thymus
20	chr9:140464800-140470800	Strong transcription	Rectal Smooth Muscle	rectum
21	chr9:140464800-140471000	Strong transcription	H1 Cell Line	embryonic stem cell
22	chr9:140464800-140471000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:140464800-140471000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr9:140464800-140471000	Strong transcription	Rectal Mucosa Donor 31	rectum
25	chr9:140464800-140471200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr9:140464800-140471600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr9:140465000-140471000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr9:140465000-140471200	Strong transcription	HUES48 Cell Line	embryonic stem cell
29	chr9:140465200-140470800	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr9:140465200-140471000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
31	chr9:140465400-140470800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr9:140465800-140471000	Strong transcription	Sigmoid Colon	Sigmoid Colon
33	chr9:140466000-140470800	Strong transcription	Lung	lung
34	chr9:140466000-140471000	Strong transcription	Rectal Mucosa Donor 29	rectum
35	chr9:140466200-140470600	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr9:140466200-140470800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr9:140466200-140470800	Strong transcription	Duodenum Smooth Muscle	Duodenum
38	chr9:140466400-140470600	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr9:140466400-140470600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
40	chr9:140466400-140470600	Strong transcription	Muscle Satellite Cultured Cells	--
41	chr9:140466400-140470600	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr9:140466400-140470600	Strong transcription	Ovary	ovary
43	chr9:140466400-140470600	Strong transcription	Osteobl	bone
44	chr9:140466400-140470800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr9:140466400-140470800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr9:140466400-140471000	Strong transcription	Fetal Lung	lung
47	chr9:140466400-140471400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr9:140466400-140471400	Strong transcription	Primary T cells from cord blood	blood
49	chr9:140466400-140471600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
50	chr9:140466600-140470600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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