Variant report

Variant	nsv894670
Chromosome Location	chr9:140503095-140526439
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1719)
CpG islands
(count:611)
Chromatin interactive
region (count:76)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1719 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140514701-140514718	K562	blood:	n/a	n/a
2	ARID3A	chr9:140512995-140513194	K562	blood:	n/a	n/a
3	ARID3A	chr9:140526287-140526304	HepG2	liver:	n/a	n/a
4	ATF1	chr9:140512908-140513272	K562	blood:	n/a	n/a
5	ATF2	chr9:140512882-140513291	GM12878	blood:	n/a	n/a
6	ATF2	chr9:140512599-140513361	GM12878	blood:	n/a	n/a
7	ATF2	chr9:140513019-140513356	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr9:140512846-140513342	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF3	chr9:140512941-140513477	K562	blood:	n/a	chr9:140513400-140513409
10	ATF3	chr9:140506242-140506580	K562	blood:	n/a	n/a
11	ATF3	chr9:140513089-140513438	A549	lung:	n/a	chr9:140513400-140513409
12	ATF3	chr9:140513079-140513492	K562	blood:	n/a	chr9:140513400-140513409
13	ATF3	chr9:140512666-140513485	A549	lung:	n/a	chr9:140513400-140513409
14	ATF3	chr9:140513263-140513470	GM12878	blood:	n/a	chr9:140513400-140513409
15	ATF3	chr9:140513192-140513485	HepG2	liver:	n/a	chr9:140513400-140513409
16	ATF3	chr9:140523164-140523326	GM12878	blood:	n/a	n/a
17	ATF3	chr9:140522958-140523491	GM12878	blood:	n/a	n/a
18	ATF3	chr9:140513171-140513459	H1-hESC	embryonic stem cell:	n/a	chr9:140513400-140513409
19	ATF3	chr9:140506272-140506563	K562	blood:	n/a	n/a
20	BACH1	chr9:140512354-140512455	K562	blood:	n/a	n/a
21	BACH1	chr9:140523076-140523260	K562	blood:	n/a	n/a
22	BACH1	chr9:140506296-140506570	H1-hESC	embryonic stem cell:	n/a	n/a
23	BCL3	chr9:140512432-140513462	GM12878	blood:	n/a	n/a
24	BCL3	chr9:140505934-140508793	A549	lung:	n/a	n/a
25	BCL3	chr9:140512082-140513429	A549	lung:	n/a	n/a
26	BCL3	chr9:140506032-140508286	A549	lung:	n/a	n/a
27	BCL3	chr9:140512554-140513408	A549	lung:	n/a	n/a
28	BCLAF1	chr9:140512590-140513424	GM12878	blood:	n/a	n/a
29	BHLHE40	chr9:140513901-140514002	GM12878	blood:	n/a	n/a
30	BHLHE40	chr9:140506261-140506575	A549	lung:	n/a	n/a
31	BHLHE40	chr9:140506215-140506621	HepG2	liver:	n/a	n/a
32	BHLHE40	chr9:140512971-140513406	K562	blood:	n/a	n/a
33	BHLHE40	chr9:140523113-140523483	GM12878	blood:	n/a	n/a
34	BHLHE40	chr9:140519825-140520087	GM12878	blood:	n/a	n/a
35	BHLHE40	chr9:140506203-140506789	K562	blood:	n/a	n/a
36	BHLHE40	chr9:140512827-140513435	GM12878	blood:	n/a	n/a
37	BHLHE40	chr9:140513027-140513435	HepG2	liver:	n/a	n/a
38	BHLHE40	chr9:140523125-140523366	K562	blood:	n/a	n/a
39	BHLHE40	chr9:140506344-140506505	GM12878	blood:	n/a	n/a
40	BRCA1	chr9:140513152-140513282	HepG2	liver:	n/a	n/a
41	BRCA1	chr9:140506306-140506994	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr9:140512436-140512563	Hela-S3	cervix:	n/a	n/a
43	BRCA1	chr9:140513086-140513352	GM12878	blood:	n/a	n/a
44	BRCA1	chr9:140513909-140514238	Hela-S3	cervix:	n/a	n/a
45	BRCA1	chr9:140512934-140513450	Hela-S3	cervix:	n/a	n/a
46	BRCA1	chr9:140513844-140513980	HepG2	liver:	n/a	n/a
47	CBX3	chr9:140512733-140513293	K562	blood:	n/a	n/a
48	CBX3	chr9:140522900-140523416	K562	blood:	n/a	n/a
49	CCNT2	chr9:140509152-140509313	K562	blood:	n/a	n/a
50	CCNT2	chr9:140512723-140513535	K562	blood:	n/a	n/a

(count:611 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140512513-140512563	NB4	blood:	n/a
2	chr9:140512513-140512563	NB4	blood:	n/a
3	chr9:140525207-140525257	GM12892	blood:	n/a
4	chr9:140512815-140512865	HIPEpiC	eye:	n/a
5	chr9:140514016-140514066	SK-N-SH	brain:	n/a
6	chr9:140513113-140513163	CMK	blood:	n/a
7	chr9:140513215-140513265	GM12891	blood:	n/a
8	chr9:140515874-140515924	GM19239	blood:	n/a
9	chr9:140514393-140514443	SK-N-SH_RA	brain:	n/a
10	chr9:140514016-140514066	PANC-1	pancreas:	n/a
11	chr9:140514016-140514066	HUVEC	blood vessel:	n/a
12	chr9:140512815-140512865	HNPCEpiC	eye:	n/a
13	chr9:140513113-140513163	AG04449	skin:	fetal
14	chr9:140515874-140515924	MCF-7	breast:	n/a
15	chr9:140513215-140513265	SKMC	muscle:	n/a
16	chr9:140525207-140525257	SK-N-SH	brain:	n/a
17	chr9:140512455-140512505	HPAEpiC	pulmonary alveolar:	n/a
18	chr9:140512455-140512505	A549	lung:	n/a
19	chr9:140512815-140512865	GM12878	blood:	n/a
20	chr9:140515874-140515924	LNCaP	prostate:	n/a
21	chr9:140512513-140512563	NT2-D1	testis:	n/a
22	chr9:140513215-140513265	SAEC	small airway:	n/a
23	chr9:140525207-140525257	H1-hESC	embryonic stem cell:	embryo
24	chr9:140515874-140515924	ovcar-3	ovarian:	n/a
25	chr9:140515874-140515924	BJ	skin:	n/a
26	chr9:140514393-140514443	GM12892	blood:	n/a
27	chr9:140513113-140513163	HNPCEpiC	eye:	n/a
28	chr9:140512455-140512505	BJ	skin:	n/a
29	chr9:140513215-140513265	AoSMC	blood vessel:	n/a
30	chr9:140525207-140525257	GM12878	blood:	n/a
31	chr9:140525207-140525257	IMR90	lung:	fetal
32	chr9:140525207-140525257	HRE	kidney:	n/a
33	chr9:140513215-140513265	H1-hESC	embryonic stem cell:	embryo
34	chr9:140513113-140513163	PFSK-1	brain:	n/a
35	chr9:140525207-140525257	HNPCEpiC	eye:	n/a
36	chr9:140514393-140514443	Jurkat	blood:	n/a
37	chr9:140513113-140513163	GM19239	blood:	n/a
38	chr9:140514016-140514066	H1-hESC	embryonic stem cell:	embryo
39	chr9:140512513-140512563	HAEpiC	amniotic membrane:	n/a
40	chr9:140512815-140512865	IMR90	lung:	fetal
41	chr9:140525207-140525257	AG04449	skin:	fetal
42	chr9:140512815-140512865	MCF-7	breast:	n/a
43	chr9:140512815-140512865	AG10803	skin:	n/a
44	chr9:140525207-140525257	U87	brain:	n/a
45	chr9:140514393-140514443	BJ	skin:	n/a
46	chr9:140514016-140514066	HAEpiC	amniotic membrane:	n/a
47	chr9:140513113-140513163	RPTEC	kidney:	n/a
48	chr9:140514393-140514443	AG10803	skin:	n/a
49	chr9:140513113-140513163	MCF10A-Er-Src	breast:	n/a
50	chr9:140513215-140513265	ProgFib	skin:	n/a

(count:76 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:140498669..140500543-chr9:140525332..140527942,2	K562	blood:
2	chr9:140520368..140523590-chr9:140524404..140528000,5	K562	blood:
3	chr9:140519393..140522407-chr9:140523335..140527001,5	MCF-7	breast:
4	chr9:140470445..140476327-chr9:140498022..140503450,9	K562	blood:
5	chr9:140499757..140501674-chr9:140525440..140528295,2	MCF-7	breast:
6	chr17:73775349..73776145-chr9:140506201..140506865,3	Hela-S3	cervix:
7	chr9:140473487..140475608-chr9:140520167..140523048,2	K562	blood:
8	chr11:66609649..66612516-chr9:140514616..140517037,2	MCF-7	breast:
9	chr9:140511744..140514616-chr9:140522544..140524636,2	MCF-7	breast:
10	chr17:80817947..80820292-chr9:140513382..140515787,2	MCF-7	breast:
11	chr9:140512805..140515429-chr9:140522584..140524525,2	K562	blood:
12	chr9:140511122..140512699-chr9:140559780..140561959,2	MCF-7	breast:
13	chr9:140513993..140515601-chr9:140519538..140521041,2	K562	blood:
14	chr9:140506663..140509441-chr9:140522574..140524533,2	K562	blood:
15	chr14:102023934..102026552-chr9:140506731..140509354,2	MCF-7	breast:
16	chr9:140482616..140489091-chr9:140495925..140503345,17	MCF-7	breast:
17	chr9:140523195..140524833-chr9:140524940..140527470,2	MCF-7	breast:
18	chr15:80213455..80216232-chr9:140505941..140507985,2	MCF-7	breast:
19	chr9:140469278..140479132-chr9:140503165..140510984,27	MCF-7	breast:
20	chr9:140510301..140512347-chr9:140541289..140543188,2	MCF-7	breast:
21	chr9:140445002..140446703-chr9:140512317..140515053,2	MCF-7	breast:
22	chr9:140497528..140501786-chr9:140520931..140524888,6	K562	blood:
23	chr9:140519645..140523590-chr9:140526467..140528234,3	K562	blood:
24	chr17:33914034..33914731-chr9:140506382..140507316,2	HCT-116	colon:
25	chr9:140512840..140515056-chr9:140515180..140517797,2	K562	blood:
26	chr9:140510590..140512160-chr9:140570027..140572607,2	MCF-7	breast:
27	chr8:96085236..96087766-chr9:140513238..140514849,2	MCF-7	breast:
28	chr9:140504074..140505804-chr9:140564024..140565554,2	K562	blood:
29	chr9:140515440..140517099-chr9:140525922..140527990,2	K562	blood:
30	chr9:140481624..140488545-chr9:140511605..140516057,16	MCF-7	breast:
31	chr9:140509926..140512200-chr9:140526442..140528104,2	MCF-7	breast:
32	chr9:140482399..140489274-chr9:140503366..140510626,23	MCF-7	breast:
33	chr9:140511878..140514123-chr9:140514786..140517240,3	MCF-7	breast:
34	chr9:140467532..140470216-chr9:140512251..140515096,2	MCF-7	breast:
35	chr9:140119502..140121788-chr9:140512732..140514255,2	MCF-7	breast:
36	chr14:96967956..96969589-chr9:140512244..140513858,2	MCF-7	breast:
37	chr17:8059167..8059999-chr9:140506144..140506746,2	Hela-S3	cervix:
38	chr9:140512574..140516809-chr9:140521486..140524902,8	K562	blood:
39	chr9:140502977..140505532-chr9:140542543..140544949,2	MCF-7	breast:
40	chr9:140504875..140507464-chr9:140524494..140527189,3	MCF-7	breast:
41	chr9:140469283..140475998-chr9:140510945..140517022,12	K562	blood:
42	chr9:140481402..140486615-chr9:140511490..140514947,5	K562	blood:
43	chr12:72057222..72057844-chr9:140506717..140507309,2	Hela-S3	cervix:
44	chr9:140172197..140174221-chr9:140511916..140514176,2	K562	blood:
45	chr9:140444995..140447677-chr9:140508337..140511208,2	MCF-7	breast:
46	chr9:139980430..139982105-chr9:140507982..140509636,2	MCF-7	breast:
47	chr9:140441799..140446269-chr9:140505086..140508400,5	MCF-7	breast:
48	chr9:140117969..140119690-chr9:140505138..140507974,2	MCF-7	breast:
49	chr9:140429112..140429930-chr9:140506255..140506842,2	MCF-7	breast:
50	chr9:140481390..140486340-chr9:140509681..140515296,7	K562	blood:

No data

Variant related genes	Relation type
ARRDC1	TF binding region
EHMT1	TF binding region
C9orf37	TF binding region
ARRDC1	CpG island
EHMT1	CpG island
C9orf37	CpG island
ENSG00000179094	chromatin interactions
ENSG00000180953	chromatin interactions
ENSG00000258938	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000259642	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000141556	chromatin interactions
ENSG00000148399	chromatin interactions
ENSG00000134824	chromatin interactions
ENSG00000167716	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000244968	chromatin interactions
ENSG00000165724	chromatin interactions
ENSG00000090060	chromatin interactions
ENSG00000198113	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000130653	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000169957	chromatin interactions
ENSG00000133858	chromatin interactions
ENSG00000100916	chromatin interactions
ENSG00000268996	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000173653	chromatin interactions
ENSG00000113594	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000260806	chromatin interactions
ENSG00000257028	chromatin interactions
ENSG00000258498	chromatin interactions
ENSG00000177239	chromatin interactions

Extended variants
information (count: 1064 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:1064 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12551420	chr9:140503095-140503096	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs558291212	chr9:140503100-140503101	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs571810363	chr9:140503104-140503105	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs537145529	chr9:140503205-140503206	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs539604595	chr9:140503232-140503233	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs573936365	chr9:140503246-140503247	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs74435969	chr9:140503250-140503251	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs60441264	chr9:140503262-140503263	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs553223401	chr9:140503271-140503272	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs573105319	chr9:140503282-140503283	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs545158953	chr9:140503315-140503316	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs565130398	chr9:140503335-140503336	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs188175995	chr9:140503384-140503385	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs577716506	chr9:140503419-140503420	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs146398273	chr9:140503461-140503462	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs563308689	chr9:140503472-140503473	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs533453961	chr9:140503508-140503509	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs191511627	chr9:140503512-140503513	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs112181684	chr9:140503521-140503522	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs189498738	chr9:140503545-140503546	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs79146742	chr9:140503546-140503547	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs564719720	chr9:140503552-140503553	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs537585667	chr9:140503596-140503597	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs550764786	chr9:140503608-140503609	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs569609153	chr9:140503672-140503673	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs535118573	chr9:140503673-140503674	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs577449196	chr9:140503684-140503685	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs371388073	chr9:140503685-140503686	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs567675308	chr9:140503714-140503715	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs536206898	chr9:140503759-140503760	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs554950538	chr9:140503763-140503764	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs561504247	chr9:140503770-140503771	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs553262134	chr9:140503805-140503806	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs573245220	chr9:140503827-140503828	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs565622673	chr9:140503833-140503834	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs149639438	chr9:140503835-140503836	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs144359074	chr9:140503885-140503886	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs575712949	chr9:140503898-140503899	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs543524543	chr9:140503912-140503913	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs181767132	chr9:140503928-140503929	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs573588742	chr9:140503932-140503933	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs542684176	chr9:140503965-140503966	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs559387141	chr9:140504010-140504011	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs536239533	chr9:140504017-140504018	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs185667169	chr9:140504079-140504080	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs541569347	chr9:140504100-140504101	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs551685116	chr9:140504109-140504110	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs557821153	chr9:140504137-140504138	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs113963179	chr9:140504148-140504149	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs565105961	chr9:140504176-140504177	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:2000 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140500800-140503600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
2	chr9:140500800-140503600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
3	chr9:140500800-140504000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
4	chr9:140501400-140503600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr9:140501400-140508400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr9:140501600-140503200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr9:140501600-140503400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr9:140501600-140503400	Enhancers	Primary T cells fromperipheralblood	blood
9	chr9:140501600-140503400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr9:140501600-140503400	Enhancers	Fetal Heart	heart
11	chr9:140501600-140504600	Enhancers	Lung	lung
12	chr9:140501600-140505600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr9:140501600-140505600	Weak transcription	A549	lung
14	chr9:140501600-140505800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr9:140501600-140506000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr9:140501600-140506000	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr9:140501600-140506200	Weak transcription	Osteobl	bone
18	chr9:140501600-140506400	Weak transcription	HUVEC	blood vessel
19	chr9:140501600-140507800	Weak transcription	Aorta	Aorta
20	chr9:140501600-140508200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr9:140501800-140503400	Enhancers	Placenta	Placenta
22	chr9:140501800-140503600	Enhancers	Stomach Mucosa	stomach
23	chr9:140501800-140506000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr9:140501800-140506000	Weak transcription	HSMMtube	muscle
25	chr9:140501800-140506200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr9:140501800-140509400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr9:140501800-140510000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
28	chr9:140501800-140512200	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr9:140502000-140503400	Enhancers	Skeletal Muscle Female	skeletal muscle
30	chr9:140502000-140503600	Enhancers	Primary hematopoietic stem cells	blood
31	chr9:140502000-140503600	Enhancers	Primary T helper cells fromperipheralblood	blood
32	chr9:140502000-140503600	Enhancers	Left Ventricle	heart
33	chr9:140502000-140506200	Weak transcription	NH-A	brain
34	chr9:140502000-140507800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr9:140502000-140508600	Weak transcription	Ovary	ovary
36	chr9:140502200-140503200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr9:140502200-140503200	Weak transcription	Brain Inferior Temporal Lobe	brain
38	chr9:140502200-140503600	Genic enhancers	Fetal Intestine Small	intestine
39	chr9:140502200-140503600	Enhancers	Gastric	stomach
40	chr9:140502200-140503600	Enhancers	Pancreas	Pancrea
41	chr9:140502200-140503600	Enhancers	Right Ventricle	heart
42	chr9:140502200-140505600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
43	chr9:140502200-140505600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr9:140502200-140505600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr9:140502200-140505600	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr9:140502200-140505800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
47	chr9:140502200-140505800	Weak transcription	Small Intestine	intestine
48	chr9:140502200-140506000	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr9:140502200-140506000	Weak transcription	Brain Hippocampus Middle	brain
50	chr9:140502200-140506000	Weak transcription	HSMM	muscle

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