Variant report

Variant	nsv894809
Chromosome Location	chr10:5696482-5711220
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:790)
CpG islands
(count:734)
Chromatin interactive
region (count:75)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:790 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:5707453-5707725	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:5701790-5702333	HepG2	liver:	n/a	n/a
3	ARID3A	chr10:5710369-5710645	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:5705962-5706115	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:5701164-5701572	HepG2	liver:	n/a	n/a
6	ATF3	chr10:5708504-5708755	HepG2	liver:	n/a	n/a
7	ATF3	chr10:5708448-5708805	K562	blood:	n/a	n/a
8	ATF3	chr10:5701787-5702111	K562	blood:	n/a	n/a
9	ATF3	chr10:5708602-5709006	A549	lung:	n/a	n/a
10	ATF3	chr10:5701883-5702096	K562	blood:	n/a	n/a
11	BACH1	chr10:5707878-5708540	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr10:5701623-5702127	GM12878	blood:	n/a	n/a
13	BCL3	chr10:5708804-5709189	GM12878	blood:	n/a	n/a
14	BCL3	chr10:5708858-5709224	GM12878	blood:	n/a	n/a
15	BHLHE40	chr10:5701989-5702001	A549	lung:	n/a	n/a
16	BHLHE40	chr10:5701799-5702319	K562	blood:	n/a	n/a
17	BHLHE40	chr10:5707876-5708313	K562	blood:	n/a	n/a
18	BHLHE40	chr10:5701024-5702625	HepG2	liver:	n/a	n/a
19	BHLHE40	chr10:5707938-5708371	HepG2	liver:	n/a	n/a
20	BHLHE40	chr10:5708587-5709192	K562	blood:	n/a	n/a
21	BHLHE40	chr10:5708641-5709243	HepG2	liver:	n/a	n/a
22	BRCA1	chr10:5708541-5708817	H1-hESC	embryonic stem cell:	n/a	n/a
23	BRCA1	chr10:5708655-5708931	HepG2	liver:	n/a	n/a
24	BRCA1	chr10:5701399-5701533	HepG2	liver:	n/a	n/a
25	CCNT2	chr10:5707836-5708803	K562	blood:	n/a	n/a
26	CEBPB	chr10:5701840-5702057	K562	blood:	n/a	n/a
27	CEBPB	chr10:5707691-5708547	MCF-7	breast:	n/a	n/a
28	CEBPB	chr10:5707621-5708410	K562	blood:	n/a	chr10:5707632-5707643
29	CEBPB	chr10:5707612-5708432	MCF-7	breast:	n/a	chr10:5707632-5707643
30	CEBPB	chr10:5707615-5708380	A549	lung:	n/a	chr10:5707632-5707643
31	CEBPB	chr10:5707682-5708415	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr10:5707691-5708058	ECC-1	luminal epithelium:	n/a	n/a
33	CEBPB	chr10:5707648-5708400	A549	lung:	n/a	n/a
34	CEBPB	chr10:5707556-5708606	A549	lung:	n/a	chr10:5707632-5707643
35	CEBPB	chr10:5701679-5702306	MCF-7	breast:	n/a	n/a
36	CEBPB	chr10:5701736-5702164	A549	lung:	n/a	n/a
37	CEBPB	chr10:5701763-5702154	IMR90	lung:	n/a	n/a
38	CEBPB	chr10:5707794-5708710	HepG2	liver:	n/a	n/a
39	CEBPB	chr10:5701386-5702563	MCF-7	breast:	n/a	n/a
40	CEBPB	chr10:5707740-5708291	HepG2	liver:	n/a	n/a
41	CEBPB	chr10:5701757-5702148	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr10:5707616-5708530	ECC-1	luminal epithelium:	n/a	chr10:5707632-5707643
43	CEBPB	chr10:5708092-5708346	ECC-1	luminal epithelium:	n/a	n/a
44	CEBPB	chr10:5701770-5702115	HepG2	liver:	n/a	n/a
45	CEBPB	chr10:5707600-5708378	K562	blood:	n/a	chr10:5707632-5707643
46	CEBPB	chr10:5701201-5702210	HepG2	liver:	n/a	n/a
47	CEBPB	chr10:5707642-5708393	IMR90	lung:	n/a	n/a
48	CEBPB	chr10:5707396-5708828	Hela-S3	cervix:	n/a	chr10:5707632-5707643
49	CEBPB	chr10:5701805-5702140	K562	blood:	n/a	n/a
50	CEBPB	chr10:5701682-5702234	A549	lung:	n/a	n/a

(count:734 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:5708797-5708847	NT2-D1	testis:	n/a
2	chr10:5705038-5705088	HMEC	breast:	n/a
3	chr10:5708797-5708847	NT2-D1	testis:	n/a
4	chr10:5705038-5705088	HMEC	breast:	n/a
5	chr10:5710888-5710938	HUVEC	blood vessel:	n/a
6	chr10:5708674-5708724	A549	lung:	n/a
7	chr10:5708765-5708815	ProgFib	skin:	n/a
8	chr10:5708825-5708875	HUVEC	blood vessel:	n/a
9	chr10:5707799-5707849	HPAEpiC	pulmonary alveolar:	n/a
10	chr10:5708797-5708847	BE2_C	brain:	n/a
11	chr10:5702083-5702133	LNCaP	prostate:	n/a
12	chr10:5708797-5708847	BJ	skin:	n/a
13	chr10:5708825-5708875	Caco-2	colon:	n/a
14	chr10:5708327-5708377	LNCaP	prostate:	n/a
15	chr10:5708731-5708781	GM19239	blood:	n/a
16	chr10:5707981-5708031	Hela-S3	cervix:	n/a
17	chr10:5707799-5707849	GM06990	blood:	n/a
18	chr10:5705038-5705088	NH-A	brain:	n/a
19	chr10:5708327-5708377	U87	brain:	n/a
20	chr10:5708674-5708724	Hela-S3	cervix:	n/a
21	chr10:5708674-5708724	AG10803	skin:	n/a
22	chr10:5707799-5707849	GM19239	blood:	n/a
23	chr10:5708327-5708377	RPTEC	kidney:	n/a
24	chr10:5708797-5708847	GM19239	blood:	n/a
25	chr10:5705038-5705088	HL-60	blood:	n/a
26	chr10:5707981-5708031	GM06990	blood:	n/a
27	chr10:5705038-5705088	AG04450	lung:	fetal
28	chr10:5708881-5708931	SAEC	small airway:	n/a
29	chr10:5702083-5702133	T-47D	breast:	n/a
30	chr10:5710888-5710938	HepG2	liver:	n/a
31	chr10:5708674-5708724	GM06990	blood:	n/a
32	chr10:5708825-5708875	HIPEpiC	eye:	n/a
33	chr10:5708327-5708377	MCF-7	breast:	n/a
34	chr10:5708825-5708875	BJ	skin:	n/a
35	chr10:5702083-5702133	GM12892	blood:	n/a
36	chr10:5708881-5708931	AG09319	gingival:	n/a
37	chr10:5707799-5707849	GM12892	blood:	n/a
38	chr10:5707981-5708031	HUVEC	blood vessel:	n/a
39	chr10:5707981-5708031	BE2_C	brain:	n/a
40	chr10:5707981-5708031	AoSMC	blood vessel:	n/a
41	chr10:5707799-5707849	SAEC	small airway:	n/a
42	chr10:5708731-5708781	PANC-1	pancreas:	n/a
43	chr10:5702083-5702133	GM12878	blood:	n/a
44	chr10:5707981-5708031	HepG2	liver:	n/a
45	chr10:5705038-5705088	AG09319	gingival:	n/a
46	chr10:5710888-5710938	Hepatocyte	liver:	n/a
47	chr10:5708731-5708781	HAEpiC	amniotic membrane:	n/a
48	chr10:5708731-5708781	HCM	heart:	n/a
49	chr10:5708825-5708875	NHBE	bronchial:	n/a
50	chr10:5707981-5708031	NB4	blood:	n/a

(count:75 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:5696053..5698803-chr10:5727232..5729360,2	K562	blood:
2	chr10:5530065..5530714-chr10:5701918..5702531,2	MCF-7	breast:
3	chr10:5695046..5697803-chr10:5701163..5704178,3	K562	blood:
4	chr10:5538340..5538886-chr10:5701563..5702107,2	MCF-7	breast:
5	chr10:5531913..5535728-chr10:5700662..5705651,7	MCF-7	breast:
6	chr10:5534278..5536175-chr10:5709413..5711333,2	MCF-7	breast:
7	chr10:5682936..5684955-chr10:5707223..5709652,2	MCF-7	breast:
8	chr10:5687724..5689255-chr10:5700903..5703551,2	K562	blood:
9	chr10:5538241..5539151-chr10:5701948..5702819,3	MCF-7	breast:
10	chr10:5694967..5699050-chr10:5700246..5704500,5	K562	blood:
11	chr10:5541719..5543881-chr10:5694869..5697799,2	MCF-7	breast:
12	chr10:5694251..5695909-chr10:5704918..5707656,2	K562	blood:
13	chr10:5544303..5545827-chr10:5700862..5703154,2	MCF-7	breast:
14	chr10:5691710..5696017-chr10:5704918..5709884,5	K562	blood:
15	chr10:5538324..5539171-chr10:5702082..5702946,2	MCF-7	breast:
16	chr10:5672469..5675172-chr10:5707074..5708649,2	K562	blood:
17	chr10:5630058..5631900-chr10:5703072..5705315,2	MCF-7	breast:
18	chr10:5535856..5541549-chr10:5699267..5704336,7	MCF-7	breast:
19	chr10:5545895..5548212-chr10:5700604..5703501,2	MCF-7	breast:
20	chr10:5553621..5555160-chr10:5697721..5700140,2	MCF-7	breast:
21	chr10:5702044..5704701-chr10:5733681..5735975,2	K562	blood:
22	chr10:5691590..5694071-chr10:5702854..5705399,2	K562	blood:
23	chr10:5691457..5694675-chr10:5697614..5700530,3	K562	blood:
24	chr10:5587706..5590617-chr10:5700904..5703703,3	MCF-7	breast:
25	chr10:5708283..5708927-chr16:31470241..31471151,2	Hela-S3	cervix:
26	chr10:5694643..5697426-chr10:5716773..5718834,2	K562	blood:
27	chr10:5679007..5681831-chr10:5698087..5699825,2	MCF-7	breast:
28	chr10:5595300..5599425-chr10:5700368..5703903,3	MCF-7	breast:
29	chr10:5488284..5491202-chr10:5703456..5706141,2	MCF-7	breast:
30	chr10:5701483..5702862-chr10:5726891..5727808,8	MCF-7	breast:
31	chr10:5704732..5708288-chr10:5710770..5713628,5	K562	blood:
32	chr10:5667938..5668510-chr10:5701995..5702827,2	MCF-7	breast:
33	chr10:5538649..5539248-chr10:5701936..5702495,2	MCF-7	breast:
34	chr10:5701947..5704230-chr10:5929629..5932716,3	MCF-7	breast:
35	chr10:5539704..5542101-chr10:5707355..5709721,2	MCF-7	breast:
36	chr10:5704182..5707347-chr10:5769975..5772596,3	MCF-7	breast:
37	chr10:5701551..5702862-chr10:5726765..5727808,8	MCF-7	breast:
38	chr10:5702205..5703969-chr10:5719361..5720928,2	K562	blood:
39	chr10:5707157..5710880-chr10:5853405..5856185,3	K562	blood:
40	chr10:5538295..5539248-chr10:5701936..5702508,5	MCF-7	breast:
41	chr10:5685269..5687615-chr10:5700766..5703664,2	K562	blood:
42	chr10:5708731..5711725-chr10:5733293..5735227,2	MCF-7	breast:
43	chr10:5486439..5489849-chr10:5706503..5709188,4	MCF-7	breast:
44	chr10:5706900..5709374-chr10:5740250..5741979,2	MCF-7	breast:
45	chr10:5586583..5591953-chr10:5698330..5703488,13	MCF-7	breast:
46	chr10:5589918..5590450-chr10:5701824..5702522,2	MCF-7	breast:
47	chr10:5708441..5709982-chr10:5853880..5856185,2	K562	blood:
48	chr10:5704732..5708288-chr10:5710770..5713628,5	K562	blood:
49	chr10:5708098..5708636-chr5:43483746..43484576,2	Hela-S3	cervix:
50	chr10:5696591..5698219-chr10:5706106..5707832,2	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM208B-4	chr10:5707186-5707298	l_247_chr10:5707185-5708703_testes
2	lnc-GDI2-4	chr10:5698831-5699156	NONHSAT011172
3	lnc-GDI2-4	chr10:5699270-5699369	NONHSAT011172
4	lnc-FAM208B-4	chr10:5707823-5708703	l_247_chr10:5707185-5708703_testes
5	lnc-FAM208B-4	chr10:5707302-5707309	l_247_chr10:5707185-5708703_testes
6	lnc-GDI2-4	chr10:5699900-5700130	NONHSAT011172

No data

Variant related genes	Relation type
ASB13	TF binding region
ASB13	CpG island
ENSG00000226471	chromatin interactions
ENSG00000108021	chromatin interactions
ENSG00000057608	chromatin interactions
ENSG00000249492	chromatin interactions
ENSG00000240577	chromatin interactions
ENSG00000173848	chromatin interactions
ENSG00000226647	chromatin interactions
ENSG00000272764	chromatin interactions
ENSG00000228951	chromatin interactions
ENSG00000140691	chromatin interactions
ENSG00000196372	chromatin interactions
ENSG00000134461	chromatin interactions
ENSG00000134452	chromatin interactions
ENSG00000100219	chromatin interactions
ENSG00000151881	chromatin interactions
ENSG00000178372	chromatin interactions
ENSG00000260267	chromatin interactions

Extended variants
information (count: 608 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:608 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3750640	chr10:5696482-5696483	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs3750639	chr10:5696488-5696489	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs533517314	chr10:5696493-5696494	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs3750638	chr10:5696494-5696495	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs567231697	chr10:5696525-5696526	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs187894592	chr10:5696529-5696530	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs556332165	chr10:5696649-5696650	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs527758965	chr10:5696713-5696714	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs577776545	chr10:5696787-5696788	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs545300021	chr10:5696810-5696811	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs554016625	chr10:5696830-5696831	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs572420203	chr10:5696834-5696835	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs113453314	chr10:5696885-5696886	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs561478786	chr10:5696890-5696891	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs531702120	chr10:5696907-5696908	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs7904109	chr10:5696925-5696926	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs71479734	chr10:5696951-5696952	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs192371251	chr10:5696969-5696970	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs551712516	chr10:5696973-5696974	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs376636416	chr10:5696989-5696990	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs527454665	chr10:5697066-5697067	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs75163537	chr10:5697080-5697081	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs527313555	chr10:5697083-5697084	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs146486474	chr10:5697093-5697094	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs184351411	chr10:5697104-5697105	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs140571249	chr10:5697136-5697137	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs537558923	chr10:5697165-5697166	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs74755983	chr10:5697202-5697203	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs571530339	chr10:5697226-5697227	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs372396019	chr10:5697252-5697253	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs538814241	chr10:5697291-5697292	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs138188022	chr10:5697338-5697339	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs541305502	chr10:5697379-5697380	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs373816426	chr10:5697419-5697420	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs572647309	chr10:5697428-5697429	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs536691280	chr10:5697442-5697443	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs554675457	chr10:5697506-5697507	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs149131912	chr10:5697514-5697515	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs543954644	chr10:5697560-5697561	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs200867061	chr10:5697571-5697572	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs189337266	chr10:5697627-5697628	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs34808256	chr10:5697650-5697651	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs554053471	chr10:5697678-5697679	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs192733666	chr10:5697700-5697701	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs143254038	chr10:5697705-5697706	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs553903368	chr10:5697706-5697707	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs144580881	chr10:5697721-5697722	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs572124979	chr10:5697790-5697791	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs11257228	chr10:5697823-5697824	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs549221272	chr10:5697836-5697837	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Cancer	21129771	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
lymphocytic leukemia	21291569	CNVD
Urothelial cell carcinoma	18451213	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Ovarian cancer	22355333	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:994 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5665600-5698600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr10:5672000-5701600	Weak transcription	NH-A	brain
3	chr10:5672400-5698600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr10:5677600-5705600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr10:5679400-5698600	Weak transcription	K562	blood
6	chr10:5681000-5698600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr10:5682400-5700800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr10:5682400-5701200	Weak transcription	Small Intestine	intestine
9	chr10:5682600-5701400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr10:5682800-5700800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:5683000-5701400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:5683000-5701600	Weak transcription	Osteobl	bone
13	chr10:5683600-5701600	Weak transcription	HMEC	breast
14	chr10:5683800-5698800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
15	chr10:5684000-5697000	Weak transcription	Primary T cells from cord blood	blood
16	chr10:5684000-5700800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr10:5684000-5701600	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr10:5684000-5701600	Weak transcription	NHEK	skin
19	chr10:5684200-5700800	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr10:5684200-5700800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr10:5684200-5701600	Weak transcription	A549	lung
22	chr10:5684200-5707600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr10:5684400-5707400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr10:5686200-5700800	Weak transcription	Fetal Lung	lung
25	chr10:5687600-5707400	Weak transcription	Fetal Kidney	kidney
26	chr10:5688200-5701400	Weak transcription	NHDF-Ad	bronchial
27	chr10:5688400-5701000	Weak transcription	Psoas Muscle	Psoas
28	chr10:5688600-5698200	Weak transcription	Primary B cells from peripheral blood	blood
29	chr10:5688800-5707600	Weak transcription	Aorta	Aorta
30	chr10:5689000-5707200	Weak transcription	Primary hematopoietic stem cells	blood
31	chr10:5689800-5696600	Weak transcription	Primary T helper cells PMA-I stimulated	--
32	chr10:5690200-5700800	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr10:5690800-5700800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr10:5690800-5701400	Weak transcription	Hela-S3	cervix
35	chr10:5691000-5700800	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr10:5691000-5702800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
37	chr10:5691200-5697000	Weak transcription	Rectal Smooth Muscle	rectum
38	chr10:5691200-5699400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr10:5691200-5701600	Weak transcription	Muscle Satellite Cultured Cells	--
40	chr10:5691200-5701800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr10:5691200-5705800	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr10:5691400-5700800	Weak transcription	HUES64 Cell Line	embryonic stem cell
43	chr10:5692400-5697000	Weak transcription	Primary T helper cells fromperipheralblood	blood
44	chr10:5692400-5698000	Enhancers	Stomach Mucosa	stomach
45	chr10:5692400-5701200	Weak transcription	Brain Germinal Matrix	brain
46	chr10:5692800-5701400	Weak transcription	NHLF	lung
47	chr10:5693000-5704200	Enhancers	Liver	Liver
48	chr10:5693200-5707400	Weak transcription	Brain Substantia Nigra	brain
49	chr10:5693400-5697200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
50	chr10:5693400-5697200	Weak transcription	Fetal Brain Female	brain

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