Variant report

Variant	nsv895367
Chromosome Location	chr10:49333754-49491047
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1197)
CpG islands
(count:1160)
Chromatin interactive
region (count:55)
LncRNA
region (count:11)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1197 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:49402930-49403171	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:49395850-49396192	HepG2	liver:	n/a	n/a
3	ATF1	chr10:49433149-49433416	K562	blood:	n/a	n/a
4	ATF2	chr10:49486941-49487901	GM12878	blood:	n/a	n/a
5	ATF2	chr10:49439298-49440117	GM12878	blood:	n/a	n/a
6	ATF2	chr10:49490835-49491395	GM12878	blood:	n/a	n/a
7	ATF2	chr10:49490829-49491340	GM12878	blood:	n/a	n/a
8	ATF2	chr10:49486865-49488015	GM12878	blood:	n/a	n/a
9	BATF	chr10:49486980-49487476	GM12878	blood:	n/a	n/a
10	BATF	chr10:49417399-49417601	GM12878	blood:	n/a	n/a
11	BATF	chr10:49480732-49481076	GM12878	blood:	n/a	n/a
12	BATF	chr10:49474596-49474854	GM12878	blood:	n/a	n/a
13	BATF	chr10:49439308-49439566	GM12878	blood:	n/a	n/a
14	BATF	chr10:49417356-49417630	GM12878	blood:	n/a	n/a
15	BATF	chr10:49414016-49414278	GM12878	blood:	n/a	chr10:49414164-49414174
16	BATF	chr10:49474491-49474913	GM12878	blood:	n/a	n/a
17	BATF	chr10:49490920-49491270	GM12878	blood:	n/a	n/a
18	BATF	chr10:49480801-49481052	GM12878	blood:	n/a	n/a
19	BATF	chr10:49414070-49414325	GM12878	blood:	n/a	chr10:49414164-49414174
20	BATF	chr10:49486983-49487492	GM12878	blood:	n/a	n/a
21	BATF	chr10:49487504-49487868	GM12878	blood:	n/a	n/a
22	BATF	chr10:49490859-49491377	GM12878	blood:	n/a	n/a
23	BCL11A	chr10:49487004-49487709	GM12878	blood:	n/a	n/a
24	BCL11A	chr10:49490880-49491363	GM12878	blood:	n/a	n/a
25	BCL11A	chr10:49487048-49487421	GM12878	blood:	n/a	n/a
26	BCL11A	chr10:49491010-49491334	GM12878	blood:	n/a	n/a
27	BCL11A	chr10:49439692-49440093	GM12878	blood:	n/a	n/a
28	BCL3	chr10:49487002-49487402	GM12878	blood:	n/a	n/a
29	BCL3	chr10:49486950-49487924	GM12878	blood:	n/a	n/a
30	BCLAF1	chr10:49490826-49491321	GM12878	blood:	n/a	n/a
31	BCLAF1	chr10:49486925-49487605	GM12878	blood:	n/a	n/a
32	BCLAF1	chr10:49487006-49487512	GM12878	blood:	n/a	n/a
33	BHLHE40	chr10:49464070-49464101	K562	blood:	n/a	n/a
34	BHLHE40	chr10:49490913-49491483	GM12878	blood:	n/a	n/a
35	BHLHE40	chr10:49486921-49487764	GM12878	blood:	n/a	n/a
36	BHLHE40	chr10:49423560-49423845	GM12878	blood:	n/a	n/a
37	BRCA1	chr10:49440180-49440230	GM12878	blood:	n/a	n/a
38	BRCA1	chr10:49423544-49423673	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr10:49435560-49435564	GM12878	blood:	n/a	n/a
40	CEBPB	chr10:49395819-49396192	HepG2	liver:	n/a	n/a
41	CEBPB	chr10:49448853-49448934	HepG2	liver:	n/a	chr10:49448913-49448924
42	CEBPB	chr10:49480965-49481230	K562	blood:	n/a	chr10:49481108-49481119
43	CEBPB	chr10:49484362-49484594	IMR90	lung:	n/a	chr10:49484442-49484453 chr10:49484442-49484455
44	CEBPB	chr10:49333603-49334066	K562	blood:	n/a	n/a
45	CEBPB	chr10:49333760-49333984	K562	blood:	n/a	n/a
46	CEBPB	chr10:49333765-49333979	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr10:49475926-49475958	K562	blood:	n/a	n/a
48	CEBPB	chr10:49484299-49484611	HepG2	liver:	n/a	chr10:49484442-49484453 chr10:49484442-49484455
49	CEBPB	chr10:49448772-49449059	K562	blood:	n/a	chr10:49448913-49448924
50	CEBPB	chr10:49421408-49421558	A549	lung:	n/a	n/a

(count:1160 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:49483356-49483406	NHDF-neo	bronchial:	n/a
2	chr10:49483356-49483406	NHDF-neo	bronchial:	n/a
3	chr10:49382153-49382203	ovcar-3	ovarian:	n/a
4	chr10:49482695-49482745	HAEpiC	amniotic membrane:	n/a
5	chr10:49460154-49460204	AG10803	skin:	n/a
6	chr10:49483356-49483406	HRE	kidney:	n/a
7	chr10:49482695-49482745	MCF10A-Er-Src	breast:	n/a
8	chr10:49381591-49381641	AG09319	gingival:	n/a
9	chr10:49388054-49388104	IMR90	lung:	fetal
10	chr10:49459949-49459999	MCF-7	breast:	n/a
11	chr10:49381591-49381641	HRE	kidney:	n/a
12	chr10:49482695-49482745	A549	lung:	n/a
13	chr10:49381591-49381641	HL-60	blood:	n/a
14	chr10:49459800-49459850	IMR90	lung:	fetal
15	chr10:49482826-49482876	GM12878	blood:	n/a
16	chr10:49459800-49459850	PFSK-1	brain:	n/a
17	chr10:49483700-49483750	HNPCEpiC	eye:	n/a
18	chr10:49482826-49482876	IMR90	lung:	fetal
19	chr10:49482723-49482773	ovcar-3	ovarian:	n/a
20	chr10:49483356-49483406	MCF-7	breast:	n/a
21	chr10:49382153-49382203	SKMC	muscle:	n/a
22	chr10:49482695-49482745	SKMC	muscle:	n/a
23	chr10:49459800-49459850	MCF10A-Er-Src	breast:	n/a
24	chr10:49482826-49482876	ProgFib	skin:	n/a
25	chr10:49459800-49459850	AoSMC	blood vessel:	n/a
26	chr10:49482695-49482745	H1-hESC	embryonic stem cell:	embryo
27	chr10:49382153-49382203	LNCaP	prostate:	n/a
28	chr10:49460249-49460299	HRE	kidney:	n/a
29	chr10:49388054-49388104	SAEC	small airway:	n/a
30	chr10:49482767-49482817	HEK293	kidney:	embryo
31	chr10:49460249-49460299	HepG2	liver:	n/a
32	chr10:49460249-49460299	RPTEC	kidney:	n/a
33	chr10:49387924-49387974	A549	lung:	n/a
34	chr10:49482826-49482876	Hela-S3	cervix:	n/a
35	chr10:49459949-49459999	Hepatocyte	liver:	n/a
36	chr10:49378921-49378971	Hepatocyte	liver:	n/a
37	chr10:49459800-49459850	BJ	skin:	n/a
38	chr10:49348564-49348614	HMEC	breast:	n/a
39	chr10:49381591-49381641	Caco-2	colon:	n/a
40	chr10:49348564-49348614	GM12892	blood:	n/a
41	chr10:49483700-49483750	HEK293	kidney:	embryo
42	chr10:49388054-49388104	Hepatocyte	liver:	n/a
43	chr10:49387924-49387974	AG10803	skin:	n/a
44	chr10:49381591-49381641	PrEC	prostate:	n/a
45	chr10:49387924-49387974	HMEC	breast:	n/a
46	chr10:49482871-49482921	HCM	heart:	n/a
47	chr10:49387924-49387974	SK-N-SH	brain:	n/a
48	chr10:49365197-49365247	HMEC	breast:	n/a
49	chr10:49460249-49460299	SK-N-MC	brain:	n/a
50	chr10:49378921-49378971	NH-A	brain:	n/a

(count:55 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:49433973..49437325-chr10:49440787..49445569,4	K562	blood:
2	chr10:49398931..49401255-chr10:49429672..49432086,2	K562	blood:
3	chr10:49396249..49398668-chr10:49400189..49401830,2	K562	blood:
4	chr10:49419791..49421477-chr10:49492128..49494569,2	K562	blood:
5	chr10:49414468..49419005-chr10:49423679..49427949,4	K562	blood:
6	chr10:49423127..49424126-chr10:49497102..49498218,5	MCF-7	breast:
7	chr10:49423481..49424232-chr10:49497847..49498349,2	K562	blood:
8	chr10:49475447..49477971-chr10:49480331..49482798,2	K562	blood:
9	chr10:49391698..49393919-chr10:49395498..49398261,2	K562	blood:
10	chr10:49455171..49459058-chr10:49459196..49462154,3	K562	blood:
11	chr10:49402150..49404815-chr10:49405998..49407981,2	K562	blood:
12	chr10:49422440..49425186-chr10:49494550..49500073,5	MCF-7	breast:
13	chr10:49461805..49464340-chr10:49481362..49483137,2	K562	blood:
14	chr10:49455241..49456959-chr10:49462949..49465290,2	MCF-7	breast:
15	chr10:49390312..49393030-chr10:49413165..49415155,2	K562	blood:
16	chr10:49433973..49437325-chr10:49440787..49445569,4	K562	blood:
17	chr10:49415578..49417989-chr16:3671827..3674383,2	MCF-7	breast:
18	chr10:49414750..49417091-chr10:49417343..49420422,3	K562	blood:
19	chr10:49438438..49440728-chr10:49443853..49445839,2	K562	blood:
20	chr10:49423270..49424166-chr10:49714289..49715192,4	K562	blood:
21	chr10:49430760..49432504-chr10:49497937..49500737,2	K562	blood:
22	chr10:49414750..49417091-chr10:49417343..49420422,3	K562	blood:
23	chr10:49460728..49464367-chr10:49465892..49469453,3	K562	blood:
24	chr10:49423310..49424126-chr10:49540299..49540827,2	MCF-7	breast:
25	chr10:49460728..49464367-chr10:49465892..49469453,3	K562	blood:
26	chr10:49459652..49462139-chr10:49513267..49515617,2	K562	blood:
27	chr10:49390312..49393030-chr10:49413165..49415155,2	K562	blood:
28	chr10:49488285..49491107-chr10:49498371..49500631,2	MCF-7	breast:
29	chr10:49401868..49404679-chr10:49725799..49728201,2	K562	blood:
30	chr10:49423144..49424160-chr10:49497116..49498379,10	MCF-7	breast:
31	chr10:49489462..49491590-chr10:49496144..49498930,2	MCF-7	breast:
32	chr10:49455241..49456959-chr10:49462949..49465290,2	MCF-7	breast:
33	chr10:49438433..49440728-chr10:49443022..49446570,3	K562	blood:
34	chr10:49414468..49419005-chr10:49423679..49427949,4	K562	blood:
35	chr10:49441878..49444791-chr10:49513078..49515110,2	K562	blood:
36	chr10:49462023..49464427-chr10:49493283..49495844,2	MCF-7	breast:
37	chr10:49423588..49424151-chr10:49714065..49715162,3	MCF-7	breast:
38	chr10:49398931..49401255-chr10:49429672..49432086,2	K562	blood:
39	chr10:49455171..49457750-chr10:49459859..49462154,2	K562	blood:
40	chr10:49391698..49393919-chr10:49395498..49398261,2	K562	blood:
41	chr10:49396249..49398668-chr10:49400189..49401830,2	K562	blood:
42	chr10:49414468..49418793-chr10:49423679..49426769,3	K562	blood:
43	chr10:49455171..49457750-chr10:49459859..49462154,2	K562	blood:
44	chr10:49475447..49477972-chr10:49481298..49483019,2	K562	blood:
45	chr10:49438438..49440728-chr10:49443853..49445839,2	K562	blood:
46	chr10:49402150..49404815-chr10:49405998..49407981,2	K562	blood:
47	chr10:49438433..49440728-chr10:49443022..49446570,3	K562	blood:
48	chr10:49391985..49393913-chr10:49401403..49403869,2	K562	blood:
49	chr10:49451828..49454602-chr10:49458352..49460279,2	K562	blood:
50	chr10:49464368..49465891-chr10:49470466..49472102,2	MCF-7	breast:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PTPN20C-2	chr10:49407711-49407889	ENSG00000248306.1
2	lnc-PTPN20C-1	chr10:49364136-49364177	ENSG00000232462.1
3	lnc-PTPN20C-6	chr10:49387910-49389727	ucscGeneNc_uc001jgx_1
4	lnc-PTPN20C-2	chr10:49409271-49409697	ENSG00000248306.1
5	lnc-PTPN20C-3	chr10:49357092-49357245	ucscGeneNc_uc001jgw_2
6	lnc-PTPN20C-1	chr10:49363368-49363746	ENSG00000232462.1
7	lnc-PTPN20C-3	chr10:49346057-49347865	ucscGeneNc_uc001jgw_2
8	lnc-MAPK8-4	chr10:49456119-49456389	NONHSAT013262
9	lnc-MAPK8-4	chr10:49455216-49455941	NONHSAT013262
10	lnc-PTPN20C-7	chr10:49456586-49457221	NONHSAT013263
11	lnc-PTPN20C-7	chr10:49459609-49459654	NONHSAT013263

No data

Variant related genes	Relation type
ENSG00000232462	TF binding region
FRMPD2	TF binding region
ENSG00000232462	CpG island
FRMPD2	CpG island
ENSG00000107643	chromatin interactions
ENSG00000170324	chromatin interactions
ENSG00000128805	chromatin interactions

Extended variants
information (count: 4503 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:4503 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200715493	chr10:49356448-49356449	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs558727551	chr10:49356449-49356450	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs577160422	chr10:49356588-49356589	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs544586439	chr10:49356593-49356594	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs2652380	chr10:49356643-49356644	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs113546753	chr10:49356681-49356682	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs562794432	chr10:49356683-49356684	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs199535545	chr10:49356892-49356893	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs530250677	chr10:49357187-49357188	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs79291408	chr10:49361001-49361002	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs529233455	chr10:49361002-49361003	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs80138496	chr10:49361003-49361004	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs368365827	chr10:49361004-49361005	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs575351710	chr10:49361036-49361037	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs2564790	chr10:49361037-49361038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs2564789	chr10:49361039-49361040	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs185806110	chr10:49361055-49361056	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs558804802	chr10:49361091-49361092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs191105385	chr10:49361092-49361093	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs537932056	chr10:49361097-49361098	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs2564788	chr10:49361116-49361117	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs556164552	chr10:49361152-49361153	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs574486673	chr10:49361196-49361197	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs535789051	chr10:49361234-49361235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs61840017	chr10:49361305-49361306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs572557201	chr10:49361312-49361313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs546352867	chr10:49361341-49361342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs187924480	chr10:49361403-49361404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs191201101	chr10:49361404-49361405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs543522031	chr10:49361471-49361472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs561713282	chr10:49361506-49361507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs377554672	chr10:49361507-49361508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs528853313	chr10:49361656-49361657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112523180	chr10:49361657-49361658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369951265	chr10:49361678-49361679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs138206983	chr10:49361679-49361680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs546028463	chr10:49361694-49361695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs551584334	chr10:49361700-49361701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs569727412	chr10:49361707-49361708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs537994426	chr10:49361761-49361762	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs549855968	chr10:49361795-49361796	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs568126654	chr10:49361803-49361804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs535412724	chr10:49361813-49361814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs554191881	chr10:49361881-49361882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs572666326	chr10:49361905-49361906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs539731209	chr10:49361966-49361967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs560345940	chr10:49362029-49362030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs372316412	chr10:49362030-49362031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs370629725	chr10:49362068-49362069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs280620	chr10:49362075-49362076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Breast cancer	21785460	CNVD
Intellectual disability	21948486	CNVD
Schizophrenia	23813976	CNVD
Acute myeloid leukemia	19651601	CNVD
Breast cancer	20409316	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Rett syndrome	21593744	CNVD
Glioblastoma multiforme	22286061	CNVD
Neuroblastoma	21899760	CNVD
Intellectual disability	22045946	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Autism	21948486	CNVD
cleft palate	21948486	CNVD
Encephalopathy	21948486	CNVD
Lung cancer	18438408	CNVD
T-cell primary immunodeficiency	21948486	CNVD
Autism	22543975	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
skeletal anomalies	21948486	CNVD
speech delay	21948486	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:521 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49356400-49357000	Enhancers	Dnd41	blood
2	chr10:49361000-49361200	Enhancers	Fetal Thymus	thymus
3	chr10:49361200-49362200	Weak transcription	Fetal Thymus	thymus
4	chr10:49362200-49363000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:49362200-49363200	Enhancers	Fetal Thymus	thymus
6	chr10:49362800-49363600	Enhancers	Dnd41	blood
7	chr10:49378400-49379000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr10:49379000-49380400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr10:49380400-49381000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr10:49380400-49381800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr10:49380600-49381000	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr10:49380600-49381000	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr10:49380800-49381000	Enhancers	Brain Substantia Nigra	brain
14	chr10:49381000-49390400	Weak transcription	Brain Substantia Nigra	brain
15	chr10:49390400-49390800	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chr10:49390400-49391000	Enhancers	Brain Inferior Temporal Lobe	brain
17	chr10:49390400-49391200	Enhancers	Brain Substantia Nigra	brain
18	chr10:49390400-49391400	Enhancers	Brain Anterior Caudate	brain
19	chr10:49390600-49390800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr10:49390600-49391000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr10:49390600-49391200	Enhancers	Brain Hippocampus Middle	brain
22	chr10:49390800-49391000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr10:49390800-49395800	Weak transcription	Cortex derived primary cultured neurospheres	brain
24	chr10:49391000-49396200	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr10:49393600-49393800	Enhancers	Fetal Brain Male	brain
26	chr10:49393800-49400000	Weak transcription	Fetal Brain Male	brain
27	chr10:49394200-49395800	Weak transcription	Brain Anterior Caudate	brain
28	chr10:49394600-49394800	Bivalent/Poised TSS	K562	blood
29	chr10:49394800-49395000	Flanking Bivalent TSS/Enh	K562	blood
30	chr10:49394800-49398000	Enhancers	Fetal Intestine Large	intestine
31	chr10:49395000-49395400	Flanking Active TSS	K562	blood
32	chr10:49395000-49395800	Enhancers	HepG2	liver
33	chr10:49395200-49396000	Enhancers	Right Atrium	heart
34	chr10:49395200-49397000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
35	chr10:49395200-49398000	Enhancers	Fetal Intestine Small	intestine
36	chr10:49395400-49396000	Enhancers	K562	blood
37	chr10:49395800-49396000	Enhancers	Brain Anterior Caudate	brain
38	chr10:49395800-49396400	Enhancers	Fetal Lung	lung
39	chr10:49395800-49396600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr10:49395800-49396600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr10:49395800-49396600	Enhancers	Fetal Muscle Leg	muscle
42	chr10:49395800-49396600	Enhancers	Left Ventricle	heart
43	chr10:49395800-49397000	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr10:49395800-49397000	Flanking Active TSS	HepG2	liver
45	chr10:49396000-49396600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr10:49396000-49396800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
47	chr10:49396000-49397000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr10:49396000-49420800	Weak transcription	Brain Anterior Caudate	brain
49	chr10:49396200-49396600	Enhancers	Brain Hippocampus Middle	brain
50	chr10:49396200-49397000	Enhancers	Brain Inferior Temporal Lobe	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links