Variant report

Variant	nsv897200
Chromosome Location	chr11:33132864-33383085
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3830)
CpG islands
(count:2810)
Chromatin interactive
region (count:272)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:14)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33351286-33351649	K562	blood:	n/a	n/a
2	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
3	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:33351288-33351628	HepG2	liver:	n/a	n/a
8	ARID3A	chr11:33182607-33183285	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:33187666-33188187	K562	blood:	n/a	chr11:33188154-33188170
10	ARID3A	chr11:33342559-33342940	K562	blood:	n/a	n/a
11	ARID3A	chr11:33233161-33233450	HepG2	liver:	n/a	n/a
12	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
13	ARID3A	chr11:33204058-33204223	HepG2	liver:	n/a	n/a
14	ARID3A	chr11:33169179-33169315	K562	blood:	n/a	n/a
15	ARID3A	chr11:33364523-33364723	K562	blood:	n/a	n/a
16	ARID3A	chr11:33187786-33188158	HepG2	liver:	n/a	n/a
17	ARID3A	chr11:33182051-33183545	K562	blood:	n/a	n/a
18	ARID3A	chr11:33193183-33193188	K562	blood:	n/a	n/a
19	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
20	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
21	ARID3A	chr11:33201178-33201210	K562	blood:	n/a	n/a
22	ARID3A	chr11:33181198-33181511	K562	blood:	n/a	n/a
23	ARID3A	chr11:33229217-33229421	K562	blood:	n/a	n/a
24	ATF1	chr11:33181115-33181435	K562	blood:	n/a	n/a
25	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
26	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
27	ATF1	chr11:33190481-33190793	K562	blood:	n/a	n/a
28	ATF1	chr11:33351332-33351614	K562	blood:	n/a	n/a
29	ATF1	chr11:33182918-33183497	K562	blood:	n/a	n/a
30	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
31	ATF1	chr11:33342458-33342912	K562	blood:	n/a	n/a
32	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
33	ATF2	chr11:33182750-33183468	GM12878	blood:	n/a	chr11:33183172-33183183
34	ATF2	chr11:33182565-33183521	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
35	ATF2	chr11:33279927-33280370	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr11:33182564-33183612	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
37	ATF2	chr11:33279439-33280494	GM12878	blood:	n/a	n/a
38	ATF2	chr11:33182677-33183409	GM12878	blood:	n/a	chr11:33183172-33183183
39	ATF3	chr11:33249491-33249809	K562	blood:	n/a	n/a
40	ATF3	chr11:33382233-33382453	K562	blood:	n/a	chr11:33382358-33382372
41	ATF3	chr11:33182601-33183715	A549	lung:	n/a	chr11:33183174-33183181 chr11:33183174-33183182 chr11:33183170-33183185 chr11:33183172-33183185 chr11:33183172-33183183 chr11:33183151-33183160 chr11:33183171-33183182
42	ATF3	chr11:33279487-33279990	A549	lung:	n/a	n/a
43	ATF3	chr11:33342449-33342699	K562	blood:	n/a	n/a
44	ATF3	chr11:33182813-33183435	K562	blood:	n/a	chr11:33183174-33183181 chr11:33183174-33183182 chr11:33183170-33183185 chr11:33183172-33183185 chr11:33183172-33183183 chr11:33183151-33183160 chr11:33183171-33183182
45	ATF3	chr11:33279599-33280413	A549	lung:	n/a	n/a
46	BACH1	chr11:33189975-33189977	K562	blood:	n/a	n/a
47	BACH1	chr11:33183058-33183405	K562	blood:	n/a	n/a
48	BACH1	chr11:33279271-33279281	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr11:33279652-33280280	H1-hESC	embryonic stem cell:	n/a	n/a
50	BACH1	chr11:33182721-33183535	H1-hESC	embryonic stem cell:	n/a	n/a

(count:2810 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33229666-33229716	HCPEpiC	choroid plexus:	n/a
2	chr11:33278752-33278802	SK-N-MC	brain:	n/a
3	chr11:33346306-33346356	PANC-1	pancreas:	n/a
4	chr11:33185376-33185426	PANC-1	pancreas:	n/a
5	chr11:33229666-33229716	HCPEpiC	choroid plexus:	n/a
6	chr11:33278752-33278802	SK-N-MC	brain:	n/a
7	chr11:33346306-33346356	PANC-1	pancreas:	n/a
8	chr11:33185376-33185426	PANC-1	pancreas:	n/a
9	chr11:33317015-33317065	H1-hESC	embryonic stem cell:	embryo
10	chr11:33279087-33279137	HUVEC	blood vessel:	n/a
11	chr11:33282841-33282891	T-47D	breast:	n/a
12	chr11:33199839-33199889	T-47D	breast:	n/a
13	chr11:33185376-33185426	HepG2	liver:	n/a
14	chr11:33308345-33308395	Hepatocyte	liver:	n/a
15	chr11:33308269-33308319	HRPEpiC	eye:	n/a
16	chr11:33183001-33183051	HRCEpiC	kidney:	n/a
17	chr11:33334443-33334493	Hela-S3	cervix:	n/a
18	chr11:33280348-33280398	NB4	blood:	n/a
19	chr11:33183473-33183523	RPTEC	kidney:	n/a
20	chr11:33276523-33276573	HNPCEpiC	eye:	n/a
21	chr11:33183213-33183263	HEK293	kidney:	embryo
22	chr11:33265440-33265490	CMK	blood:	n/a
23	chr11:33375412-33375462	NHDF-neo	bronchial:	n/a
24	chr11:33182799-33182849	NHBE	bronchial:	n/a
25	chr11:33189542-33189592	MCF10A-Er-Src	breast:	n/a
26	chr11:33214297-33214347	ECC-1	luminal epithelium:	n/a
27	chr11:33317015-33317065	NHDF-neo	bronchial:	n/a
28	chr11:33317093-33317143	NH-A	brain:	n/a
29	chr11:33280157-33280207	BE2_C	brain:	n/a
30	chr11:33189542-33189592	Caco-2	colon:	n/a
31	chr11:33182890-33182940	AoSMC	blood vessel:	n/a
32	chr11:33280348-33280398	HNPCEpiC	eye:	n/a
33	chr11:33278679-33278729	HL-60	blood:	n/a
34	chr11:33183473-33183523	HNPCEpiC	eye:	n/a
35	chr11:33189542-33189592	H1-hESC	embryonic stem cell:	embryo
36	chr11:33209645-33209695	NT2-D1	testis:	n/a
37	chr11:33217195-33217245	GM19239	blood:	n/a
38	chr11:33199839-33199889	HL-60	blood:	n/a
39	chr11:33278186-33278236	AG10803	skin:	n/a
40	chr11:33375412-33375462	LNCaP	prostate:	n/a
41	chr11:33276523-33276573	BE2_C	brain:	n/a
42	chr11:33183473-33183523	NHDF-neo	bronchial:	n/a
43	chr11:33264842-33264892	H1-hESC	embryonic stem cell:	embryo
44	chr11:33317093-33317143	T-47D	breast:	n/a
45	chr11:33265440-33265490	HRCEpiC	kidney:	n/a
46	chr11:33308269-33308319	CMK	blood:	n/a
47	chr11:33217195-33217245	H1-hESC	embryonic stem cell:	embryo
48	chr11:33279136-33279186	Hela-S3	cervix:	n/a
49	chr11:33276523-33276573	HRPEpiC	eye:	n/a
50	chr11:33278679-33278729	HEEpiC	esophagus:	n/a

(count:272 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
2	chr11:33366273..33368343-chr11:33370196..33371959,2	K562	blood:
3	chr11:33277371..33280516-chr11:33349638..33353162,5	MCF-7	breast:
4	chr11:33277371..33280516-chr11:33349638..33353162,5	MCF-7	breast:
5	chr11:33154721..33157255-chr11:33279375..33281458,2	K562	blood:
6	chr11:33278726..33280450-chr11:33281351..33283602,2	MCF-7	breast:
7	chr11:33181310..33183473-chr11:33251484..33253503,2	K562	blood:
8	chr11:33277785..33280697-chr11:33298696..33301567,3	K562	blood:
9	chr11:33146192..33148602-chr11:33177101..33179018,2	K562	blood:
10	chr11:33131476..33135821-chr11:33137366..33139055,4	K562	blood:
11	chr11:33169593..33172505-chr11:33177595..33179412,2	K562	blood:
12	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
13	chr11:33262756..33265436-chr11:33277701..33280558,4	MCF-7	breast:
14	chr11:33303628..33306131-chr11:33323858..33326842,2	MCF-7	breast:
15	chr11:33152168..33154293-chr11:33162964..33164781,2	K562	blood:
16	chr11:33215749..33218318-chr11:33225000..33226573,2	K562	blood:
17	chr11:33133284..33135813-chr11:33138983..33141504,2	MCF-7	breast:
18	chr11:33277788..33280266-chr11:33314208..33316157,2	K562	blood:
19	chr11:33198554..33200197-chr11:33279365..33281352,2	K562	blood:
20	chr11:33308929..33311681-chr11:33352469..33354383,2	MCF-7	breast:
21	chr11:33279345..33279976-chr6:27861115..27861730,2	Hela-S3	cervix:
22	chr11:33353025..33355412-chr11:33355874..33357955,2	MCF-7	breast:
23	chr11:33343171..33345414-chr11:33349512..33351209,2	K562	blood:
24	chr11:33164729..33167048-chr11:33181551..33183084,3	K562	blood:
25	chr11:33187528..33188393-chr11:33341292..33341979,2	K562	blood:
26	chr11:33164859..33166687-chr11:33174794..33177697,2	K562	blood:
27	chr11:33161983..33167383-chr11:33177368..33180644,5	K562	blood:
28	chr11:33347406..33349145-chr11:33350262..33352793,2	MCF-7	breast:
29	chr11:33139857..33145009-chr11:33151477..33155774,5	K562	blood:
30	chr11:797886..798445-chr11:33182179..33183133,2	HCT-116	colon:
31	chr11:33279409..33279923-chr13:52026765..52027551,2	Hela-S3	cervix:
32	chr11:33164859..33166687-chr11:33174794..33177697,2	K562	blood:
33	chr11:33187786..33191779-chr11:33278023..33282064,7	MCF-7	breast:
34	chr11:33278689..33280532-chr11:33344460..33346639,2	K562	blood:
35	chr11:33142839..33144510-chr11:33145083..33148009,2	MCF-7	breast:
36	chr11:33171924..33174713-chr11:33176095..33179551,3	MCF-7	breast:
37	chr11:33345288..33347427-chr11:33347864..33349944,2	MCF-7	breast:
38	chr11:33345288..33347427-chr11:33347864..33349944,2	MCF-7	breast:
39	chr11:33267892..33269409-chr11:33276644..33279476,3	MCF-7	breast:
40	chr11:33277710..33282201-chr11:33292143..33296310,6	K562	blood:
41	chr11:33330031..33332498-chr11:33332591..33335075,2	MCF-7	breast:
42	chr11:33264545..33268685-chr11:33272682..33276323,4	MCF-7	breast:
43	chr11:33365715..33367217-chr11:33368914..33370934,2	K562	blood:
44	chr11:33154713..33156915-chr11:33157694..33159800,2	MCF-7	breast:
45	chr11:33187604..33188364-chr11:33351039..33351579,2	MCF-7	breast:
46	chr11:33366360..33368007-chr11:33376347..33377878,2	K562	blood:
47	chr11:33340003..33342699-chr11:33347574..33349225,2	K562	blood:
48	chr11:33181442..33182010-chr15:57615799..57616300,2	Hela-S3	cervix:
49	chr11:33267480..33271185-chr11:33277468..33280694,5	MCF-7	breast:
50	chr11:33181378..33183783-chr11:33345945..33349178,4	K562	blood:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP11L1-1	chr11:33211479-33213144	ENSG00000247151
2	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
3	lnc-TCP11L1-1	chr11:33210914-33211103	ENSG00000247151
4	lnc-CSTF3-3	chr11:33211608-33212049	NONHSAT018693
5	lnc-TCP11L1-1	chr11:33211479-33211840	ENSG00000247151
6	lnc-TCP11L1-1	chr11:33211479-33213142	NONHSAT018691
7	lnc-CSTF3-5	chr11:33222131-33222464	NONHSAT018696
8	lnc-CSTF3-4	chr11:33212346-33212446	NONHSAT018694
9	lnc-CSTF3-4	chr11:33212459-33213144	NONHSAT018694
10	lnc-TCP11L1-1	chr11:33210914-33211103	NONHSAT018691
11	lnc-TCP11L1-1	chr11:33183234-33183327	ENSG00000247151
12	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
13	lnc-TCP11L1-1	chr11:33210316-33210396	NONHSAT018691
14	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+
15	lnc-TCP11L1-1	chr11:33183203-33183327	ENSG00000247151
16	lnc-TCP11L1-1	chr11:33183203-33183327	NONHSAT018691
17	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151

No data

(count:14 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HIPK3	hsa-miR-106a-5p	chr11:33375245-33375267
2	HIPK3	hsa-miR-19b-3p	chr11:33375275-33375282
3	HIPK3	hsa-miR-19b-3p	chr11:33358682-33358704
4	HIPK3	hsa-miR-19b-3p	chr11:33375260-33375282
5	HIPK3	hsa-miR-92a-3p	chr11:33375388-33375409
6	HIPK3	hsa-miR-124-3p	chr11:33375663-33375670
7	HIPK3	hsa-miR-124-3p	chr11:33375651-33375670
8	HIPK3	hsa-miR-20b-5p	chr11:33375709-33375730
9	HIPK3	hsa-miR-92a-3p	chr11:33375228-33375234
10	HIPK3	hsa-miR-92a-3p	chr11:33375214-33375235
11	HIPK3	hsa-miR-20b-5p	chr11:33375245-33375267
12	HIPK3	hsa-miR-124-3p	chr11:33375376-33375395
13	HIPK3	hsa-miR-106a-5p	chr11:33375709-33375730
14	HIPK3	hsa-miR-335-5p	chr11:33375589-33375614

Variant related genes	Relation type
ENSG00000200485	TF binding region
ENSG00000206808	TF binding region
HIPK3	TF binding region
RPL29P23	TF binding region
CSTF3	TF binding region
ENSG00000241255	TF binding region
CSTF3-AS1	TF binding region
ENSG00000223134	TF binding region
ENSG00000200485	CpG island
ENSG00000206808	CpG island
HIPK3	CpG island
RPL29P23	CpG island
CSTF3	CpG island
ENSG00000241255	CpG island
CSTF3-AS1	CpG island
ENSG00000223134	CpG island
ENSG00000236778	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000223134	chromatin interactions
ENSG00000170899	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000108846	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000176148	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000207972	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000206573	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000272762	chromatin interactions
ENSG00000111669	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000128595	chromatin interactions
ENSG00000130066	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000248487	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000202198	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000141522	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000028528	chromatin interactions
ENSG00000177542	chromatin interactions
ENSG00000200485	chromatin interactions
NUP160	miRNA target sites
PSME3	miRNA target sites
ERI2	miRNA target sites
MICALL1	miRNA target sites
ARID2	miRNA target sites
YWHAZ	miRNA target sites

Extended variants
information (count: 8548 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:8548 , 50 per page) page: 1 2 3 4 5 6 7 ... 171

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3117655	chr11:33132864-33132865	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs547777256	chr11:33132866-33132867	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs35973270	chr11:33132871-33132872	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs115938129	chr11:33132912-33132913	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs536774720	chr11:33132956-33132957	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs548909940	chr11:33133016-33133017	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs550277332	chr11:33133122-33133123	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs570303819	chr11:33133124-33133125	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34330869	chr11:33133145-33133146	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs539231767	chr11:33133204-33133205	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs144254464	chr11:33133211-33133212	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566371376	chr11:33133256-33133257	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs77024572	chr11:33133301-33133302	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs553749699	chr11:33133305-33133306	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534465686	chr11:33133314-33133315	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs190599098	chr11:33133367-33133368	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs542344877	chr11:33133381-33133382	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs140771186	chr11:33133434-33133435	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs182202337	chr11:33133521-33133522	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs185242331	chr11:33133557-33133558	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs564892054	chr11:33133602-33133603	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs527601138	chr11:33133628-33133629	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs143113198	chr11:33133629-33133630	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs561363067	chr11:33133669-33133670	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs190837520	chr11:33133679-33133680	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs532558713	chr11:33133702-33133703	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs550344462	chr11:33133802-33133803	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs551071186	chr11:33133827-33133828	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs569227579	chr11:33133861-33133862	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs570166004	chr11:33133864-33133865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs147501752	chr11:33133922-33133923	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs537967858	chr11:33133930-33133931	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs111345967	chr11:33133940-33133941	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs374743632	chr11:33133941-33133942	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs552817832	chr11:33134048-33134049	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs140098988	chr11:33134109-33134110	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs117247924	chr11:33134120-33134121	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs554945632	chr11:33134195-33134196	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs145592072	chr11:33134250-33134251	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs151110798	chr11:33134259-33134260	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs140037810	chr11:33134279-33134280	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs575743285	chr11:33134351-33134352	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs544671662	chr11:33134414-33134415	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs149664567	chr11:33134474-33134475	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs183392791	chr11:33134488-33134489	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs542026484	chr11:33134516-33134517	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs7127994	chr11:33134546-33134547	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs529969139	chr11:33134571-33134572	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs376001171	chr11:33134582-33134583	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs553684149	chr11:33134583-33134584	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:6020 , 50 per page) page: 1 2 3 4 5 6 7 ... 121

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33087800-33138000	Weak transcription	Stomach Mucosa	stomach
2	chr11:33104800-33133600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr11:33113600-33161800	Weak transcription	Left Ventricle	heart
4	chr11:33119200-33165000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr11:33122600-33137800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr11:33122800-33144200	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:33123000-33134200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr11:33123000-33138000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr11:33123000-33138200	Weak transcription	Brain Substantia Nigra	brain
10	chr11:33123400-33134000	Weak transcription	Colon Smooth Muscle	Colon
11	chr11:33124000-33181800	Weak transcription	Esophagus	oesophagus
12	chr11:33124200-33136000	Weak transcription	NHLF	lung
13	chr11:33124200-33146600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr11:33124200-33147000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr11:33124400-33143200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:33124600-33137800	Weak transcription	HMEC	breast
17	chr11:33124600-33138000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr11:33124600-33138200	Weak transcription	Fetal Kidney	kidney
19	chr11:33124600-33140200	Weak transcription	HUVEC	blood vessel
20	chr11:33124600-33143200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr11:33124600-33156400	Weak transcription	Cortex derived primary cultured neurospheres	brain
22	chr11:33124600-33163400	Weak transcription	Brain Anterior Caudate	brain
23	chr11:33126200-33156200	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr11:33126200-33156200	Weak transcription	K562	blood
25	chr11:33126600-33136800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr11:33126600-33160800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr11:33126800-33146800	Weak transcription	Fetal Muscle Trunk	muscle
28	chr11:33126800-33155200	Weak transcription	Primary hematopoietic stem cells	blood
29	chr11:33127200-33146800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr11:33127200-33147000	Weak transcription	Primary B cells from cord blood	blood
31	chr11:33127200-33147600	Weak transcription	Dnd41	blood
32	chr11:33127200-33155800	Weak transcription	NHDF-Ad	bronchial
33	chr11:33127200-33156800	Weak transcription	NH-A	brain
34	chr11:33127400-33136200	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr11:33127400-33138200	Weak transcription	A549	lung
36	chr11:33127400-33146600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr11:33127400-33146600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr11:33127400-33146600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr11:33127400-33146600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr11:33127400-33159200	Weak transcription	Primary T helper cells PMA-I stimulated	--
41	chr11:33127600-33138000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr11:33127600-33140800	Weak transcription	Liver	Liver
43	chr11:33127600-33141000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr11:33127600-33146400	Weak transcription	HSMM	muscle
45	chr11:33127600-33155000	Weak transcription	Primary monocytes fromperipheralblood	blood
46	chr11:33127600-33161400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr11:33128400-33140600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr11:33128600-33138200	Weak transcription	HUES48 Cell Line	embryonic stem cell
49	chr11:33129000-33138000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr11:33129200-33146800	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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