Variant report

Variant	nsv897201
Chromosome Location	chr11:33154678-33370884
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3595)
CpG islands
(count:2751)
Chromatin interactive
region (count:237)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:3595 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33342559-33342940	K562	blood:	n/a	n/a
2	ARID3A	chr11:33233161-33233450	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
4	ARID3A	chr11:33187786-33188158	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:33193183-33193188	K562	blood:	n/a	n/a
8	ARID3A	chr11:33169179-33169315	K562	blood:	n/a	n/a
9	ARID3A	chr11:33351286-33351649	K562	blood:	n/a	n/a
10	ARID3A	chr11:33351288-33351628	HepG2	liver:	n/a	n/a
11	ARID3A	chr11:33364523-33364723	K562	blood:	n/a	n/a
12	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
13	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
14	ARID3A	chr11:33187666-33188187	K562	blood:	n/a	chr11:33188154-33188170
15	ARID3A	chr11:33201178-33201210	K562	blood:	n/a	n/a
16	ARID3A	chr11:33229217-33229421	K562	blood:	n/a	n/a
17	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
18	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
19	ARID3A	chr11:33181198-33181511	K562	blood:	n/a	n/a
20	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
21	ARID3A	chr11:33182051-33183545	K562	blood:	n/a	n/a
22	ARID3A	chr11:33204058-33204223	HepG2	liver:	n/a	n/a
23	ARID3A	chr11:33182607-33183285	HepG2	liver:	n/a	n/a
24	ATF1	chr11:33181115-33181435	K562	blood:	n/a	n/a
25	ATF1	chr11:33351332-33351614	K562	blood:	n/a	n/a
26	ATF1	chr11:33342458-33342912	K562	blood:	n/a	n/a
27	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
28	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
29	ATF1	chr11:33182918-33183497	K562	blood:	n/a	n/a
30	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
31	ATF1	chr11:33190481-33190793	K562	blood:	n/a	n/a
32	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
33	ATF2	chr11:33182750-33183468	GM12878	blood:	n/a	chr11:33183172-33183183
34	ATF2	chr11:33182565-33183521	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
35	ATF2	chr11:33279439-33280494	GM12878	blood:	n/a	n/a
36	ATF2	chr11:33182677-33183409	GM12878	blood:	n/a	chr11:33183172-33183183
37	ATF2	chr11:33279927-33280370	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF2	chr11:33182564-33183612	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
39	ATF3	chr11:33182813-33183435	K562	blood:	n/a	chr11:33183174-33183181 chr11:33183174-33183182 chr11:33183170-33183185 chr11:33183172-33183185 chr11:33183172-33183183 chr11:33183151-33183160 chr11:33183171-33183182
40	ATF3	chr11:33279487-33279990	A549	lung:	n/a	n/a
41	ATF3	chr11:33182601-33183715	A549	lung:	n/a	chr11:33183174-33183181 chr11:33183174-33183182 chr11:33183170-33183185 chr11:33183172-33183185 chr11:33183172-33183183 chr11:33183151-33183160 chr11:33183171-33183182
42	ATF3	chr11:33279599-33280413	A549	lung:	n/a	n/a
43	ATF3	chr11:33342449-33342699	K562	blood:	n/a	n/a
44	ATF3	chr11:33249491-33249809	K562	blood:	n/a	n/a
45	BACH1	chr11:33279271-33279281	H1-hESC	embryonic stem cell:	n/a	n/a
46	BACH1	chr11:33189975-33189977	K562	blood:	n/a	n/a
47	BACH1	chr11:33182721-33183535	H1-hESC	embryonic stem cell:	n/a	n/a
48	BACH1	chr11:33364471-33364818	K562	blood:	n/a	n/a
49	BACH1	chr11:33183058-33183405	K562	blood:	n/a	n/a
50	BACH1	chr11:33279652-33280280	H1-hESC	embryonic stem cell:	n/a	n/a

(count:2751 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33182799-33182849	GM12892	blood:	n/a
2	chr11:33280348-33280398	SK-N-SH_RA	brain:	n/a
3	chr11:33264842-33264892	HRPEpiC	eye:	n/a
4	chr11:33163286-33163336	PFSK-1	brain:	n/a
5	chr11:33183108-33183158	HL-60	blood:	n/a
6	chr11:33229666-33229716	HNPCEpiC	eye:	n/a
7	chr11:33182799-33182849	GM12892	blood:	n/a
8	chr11:33280348-33280398	SK-N-SH_RA	brain:	n/a
9	chr11:33264842-33264892	HRPEpiC	eye:	n/a
10	chr11:33163286-33163336	PFSK-1	brain:	n/a
11	chr11:33183108-33183158	HL-60	blood:	n/a
12	chr11:33229666-33229716	HNPCEpiC	eye:	n/a
13	chr11:33182894-33182944	RPTEC	kidney:	n/a
14	chr11:33183473-33183523	AG10803	skin:	n/a
15	chr11:33317015-33317065	K562	blood:	n/a
16	chr11:33317039-33317089	A549	lung:	n/a
17	chr11:33317093-33317143	NHBE	bronchial:	n/a
18	chr11:33214297-33214347	GM19239	blood:	n/a
19	chr11:33211414-33211464	HUVEC	blood vessel:	n/a
20	chr11:33182894-33182944	GM12891	blood:	n/a
21	chr11:33278752-33278802	U87	brain:	n/a
22	chr11:33183213-33183263	K562	blood:	n/a
23	chr11:33229666-33229716	SK-N-SH	brain:	n/a
24	chr11:33308345-33308395	GM06990	blood:	n/a
25	chr11:33317093-33317143	IMR90	lung:	fetal
26	chr11:33278679-33278729	HRPEpiC	eye:	n/a
27	chr11:33278752-33278802	HCT-116	colon:	n/a
28	chr11:33308269-33308319	HNPCEpiC	eye:	n/a
29	chr11:33182787-33182837	PrEC	prostate:	n/a
30	chr11:33308345-33308395	SK-N-SH_RA	brain:	n/a
31	chr11:33278679-33278729	GM12892	blood:	n/a
32	chr11:33279091-33279141	ProgFib	skin:	n/a
33	chr11:33279091-33279141	HIPEpiC	eye:	n/a
34	chr11:33282841-33282891	ECC-1	luminal epithelium:	n/a
35	chr11:33182787-33182837	GM19239	blood:	n/a
36	chr11:33280012-33280062	HCPEpiC	choroid plexus:	n/a
37	chr11:33317015-33317065	H1-hESC	embryonic stem cell:	embryo
38	chr11:33211414-33211464	GM12891	blood:	n/a
39	chr11:33265440-33265490	MCF10A-Er-Src	breast:	n/a
40	chr11:33279252-33279302	HRPEpiC	eye:	n/a
41	chr11:33182890-33182940	HEEpiC	esophagus:	n/a
42	chr11:33279252-33279302	SK-N-MC	brain:	n/a
43	chr11:33183110-33183160	PFSK-1	brain:	n/a
44	chr11:33183001-33183051	NB4	blood:	n/a
45	chr11:33163286-33163336	K562	blood:	n/a
46	chr11:33308269-33308319	SK-N-MC	brain:	n/a
47	chr11:33278752-33278802	PrEC	prostate:	n/a
48	chr11:33183108-33183158	HAEpiC	amniotic membrane:	n/a
49	chr11:33182894-33182944	HCM	heart:	n/a
50	chr11:33280157-33280207	ECC-1	luminal epithelium:	n/a

(count:237 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr11:33154721..33157255-chr11:33279375..33281458,2	K562	blood:
2	chr11:33187528..33188393-chr11:33341292..33341979,2	K562	blood:
3	chr11:33181657..33184341-chr11:33279051..33282180,3	MCF-7	breast:
4	chr11:33209345..33211297-chr11:33213358..33214880,2	K562	blood:
5	chr11:33323694..33328844-chr11:33341332..33344470,4	K562	blood:
6	chr11:33360349..33362095-chr11:33370787..33373728,2	MCF-7	breast:
7	chr11:33277681..33279194-chr11:33330254..33333182,2	MCF-7	breast:
8	chr11:33259958..33264856-chr11:33277733..33283144,7	MCF-7	breast:
9	chr11:33187604..33188364-chr11:33351039..33351579,2	MCF-7	breast:
10	chr11:33182274..33183032-chr3:52007563..52008447,2	Hela-S3	cervix:
11	chr11:33360581..33362754-chr11:33365388..33367285,2	K562	blood:
12	chr11:33345288..33347427-chr11:33347864..33349944,2	MCF-7	breast:
13	chr11:33295510..33298168-chr11:33350276..33353237,2	K562	blood:
14	chr11:33165074..33167895-chr11:33168095..33170897,3	K562	blood:
15	chr11:33183085..33184714-chr11:33357286..33359018,2	K562	blood:
16	chr11:33352566..33355131-chr11:33757100..33758985,2	MCF-7	breast:
17	chr11:33187260..33188477-chr11:33350825..33351973,13	MCF-7	breast:
18	chr11:33169593..33172505-chr11:33177595..33179412,2	K562	blood:
19	chr11:33215749..33218318-chr11:33225000..33226573,2	K562	blood:
20	chr11:33241181..33243191-chr11:33245641..33247862,2	MCF-7	breast:
21	chr11:33180160..33183951-chr11:33277482..33283147,16	K562	blood:
22	chr11:33169593..33172505-chr11:33177595..33179412,2	K562	blood:
23	chr11:33295510..33298168-chr11:33350276..33353237,2	K562	blood:
24	chr11:33302394..33304355-chr11:33304871..33306410,2	MCF-7	breast:
25	chr11:33171924..33174713-chr11:33176095..33179551,3	MCF-7	breast:
26	chr11:33278197..33279052-chr5:134240296..134240970,2	Hela-S3	cervix:
27	chr11:33278564..33280833-chr11:33295728..33298096,2	K562	blood:
28	chr11:33370166..33372800-chr11:33374328..33376444,2	MCF-7	breast:
29	chr11:33330605..33333745-chr11:33333939..33336380,3	K562	blood:
30	chr11:33365715..33367217-chr11:33368914..33370934,2	K562	blood:
31	chr11:33181707..33184014-chr11:33222885..33224416,2	K562	blood:
32	chr11:33187897..33188411-chr11:33708905..33709652,2	K562	blood:
33	chr11:33184452..33186716-chr11:33277546..33280813,3	MCF-7	breast:
34	chr11:33160988..33163262-chr11:33164443..33166161,2	MCF-7	breast:
35	chr11:33170542..33173595-chr11:33181570..33184778,4	MCF-7	breast:
36	chr11:33287096..33288603-chr11:33295589..33298178,2	K562	blood:
37	chr11:33277371..33280516-chr11:33349638..33353162,5	MCF-7	breast:
38	chr11:33198554..33200197-chr11:33279365..33281352,2	K562	blood:
39	chr11:33277703..33279288-chr11:33314208..33316687,2	K562	blood:
40	chr11:33279271..33281260-chr11:33331405..33333879,2	MCF-7	breast:
41	chr11:33290160..33295323-chr11:33296264..33299611,6	K562	blood:
42	chr11:33161443..33163020-chr11:33181758..33183583,2	K562	blood:
43	chr11:33187513..33188468-chr11:33351019..33351906,6	K562	blood:
44	chr11:33301670..33304585-chr11:33308750..33310555,2	MCF-7	breast:
45	chr11:33279747..33280263-chrX:23801172..23801824,2	Hela-S3	cervix:
46	chr11:33178973..33181274-chr11:33181580..33184437,3	MCF-7	breast:
47	chr11:33347446..33349133-chr11:33352606..33354562,2	K562	blood:
48	chr11:33267841..33270314-chr11:33276533..33279116,3	K562	blood:
49	chr11:33181954..33184910-chr11:33755905..33758961,3	K562	blood:
50	chr11:32914737..32917481-chr11:33177201..33180231,3	K562	blood:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP11L1-1	chr11:33210316-33210396	NONHSAT018691
2	lnc-TCP11L1-1	chr11:33211479-33211840	ENSG00000247151
3	lnc-TCP11L1-1	chr11:33210914-33211103	ENSG00000247151
4	lnc-CSTF3-5	chr11:33222131-33222464	NONHSAT018696
5	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+
6	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
7	lnc-CSTF3-4	chr11:33212459-33213144	NONHSAT018694
8	lnc-TCP11L1-1	chr11:33183203-33183327	ENSG00000247151
9	lnc-TCP11L1-1	chr11:33211479-33213144	ENSG00000247151
10	lnc-TCP11L1-1	chr11:33211479-33213142	NONHSAT018691
11	lnc-TCP11L1-1	chr11:33183234-33183327	ENSG00000247151
12	lnc-TCP11L1-1	chr11:33210914-33211103	NONHSAT018691
13	lnc-CSTF3-4	chr11:33212346-33212446	NONHSAT018694
14	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
15	lnc-CSTF3-3	chr11:33211608-33212049	NONHSAT018693
16	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
17	lnc-TCP11L1-1	chr11:33183203-33183327	NONHSAT018691

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	HIPK3	hsa-miR-19b-3p	chr11:33358682-33358704

Variant related genes	Relation type
ENSG00000200485	TF binding region
CSTF3	TF binding region
ENSG00000241255	TF binding region
CSTF3-AS1	TF binding region
ENSG00000206808	TF binding region
HIPK3	TF binding region
RPL29P23	TF binding region
ENSG00000200485	CpG island
CSTF3	CpG island
ENSG00000241255	CpG island
CSTF3-AS1	CpG island
ENSG00000206808	CpG island
HIPK3	CpG island
RPL29P23	CpG island
ENSG00000272762	chromatin interactions
ENSG00000177542	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000206573	chromatin interactions
ENSG00000176148	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000141522	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000108846	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000207972	chromatin interactions
ENSG00000200485	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000223134	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000248487	chromatin interactions
ENSG00000028528	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000111669	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000130066	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000128595	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000236778	chromatin interactions
PSME3	miRNA target sites
ARID2	miRNA target sites
YWHAZ	miRNA target sites
NUP160	miRNA target sites
MICALL1	miRNA target sites
ERI2	miRNA target sites

Extended variants
information (count: 7463 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:7463 , 50 per page) page: 1 2 3 4 5 6 7 ... 150

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs432219	chr11:33154678-33154679	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs530870549	chr11:33154708-33154709	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs140928476	chr11:33154712-33154713	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs190803475	chr11:33154742-33154743	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs373887183	chr11:33154812-33154813	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs150201139	chr11:33154828-33154829	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs79049888	chr11:33154891-33154892	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs34205794	chr11:33154961-33154962	Enhancers Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs183354330	chr11:33155005-33155006	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs544495723	chr11:33155049-33155050	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs535552294	chr11:33155104-33155105	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs555958117	chr11:33155123-33155124	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs145761105	chr11:33155146-33155147	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs538574715	chr11:33155212-33155213	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs111941715	chr11:33155226-33155227	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs11032154	chr11:33155264-33155265	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs58206114	chr11:33155305-33155306	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs187257217	chr11:33155349-33155350	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs113929252	chr11:33155379-33155380	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs573000845	chr11:33155441-33155442	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs541544357	chr11:33155486-33155487	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs561960717	chr11:33155505-33155506	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs570571156	chr11:33155524-33155525	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs561230594	chr11:33155568-33155569	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs183078006	chr11:33155595-33155596	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs537471161	chr11:33155597-33155598	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs564049447	chr11:33155625-33155626	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs533026448	chr11:33155626-33155627	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs546613310	chr11:33155631-33155632	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs566507552	chr11:33155652-33155653	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs187969038	chr11:33155726-33155727	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs55946128	chr11:33155744-33155745	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs549204336	chr11:33155764-33155765	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs569286051	chr11:33155773-33155774	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs538062362	chr11:33155790-33155791	Enhancers Weak transcription Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs192995925	chr11:33155813-33155814	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs145153625	chr11:33155814-33155815	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs148383855	chr11:33155857-33155858	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs183729041	chr11:33155871-33155872	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs572740779	chr11:33155939-33155940	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs535584411	chr11:33155962-33155963	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs141148719	chr11:33156036-33156037	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs556107997	chr11:33156067-33156068	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs568454887	chr11:33156126-33156127	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs575258755	chr11:33156132-33156133	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs544020690	chr11:33156193-33156194	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs77282495	chr11:33156223-33156224	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs563914018	chr11:33156252-33156253	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs7952719	chr11:33156265-33156266	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs139071483	chr11:33156366-33156367	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:5594 , 50 per page) page: 1 2 3 4 5 6 7 ... 112

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33113600-33161800	Weak transcription	Left Ventricle	heart
2	chr11:33119200-33165000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:33124000-33181800	Weak transcription	Esophagus	oesophagus
4	chr11:33124600-33156400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:33124600-33163400	Weak transcription	Brain Anterior Caudate	brain
6	chr11:33126200-33156200	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr11:33126200-33156200	Weak transcription	K562	blood
8	chr11:33126600-33160800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr11:33126800-33155200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr11:33127200-33155800	Weak transcription	NHDF-Ad	bronchial
11	chr11:33127200-33156800	Weak transcription	NH-A	brain
12	chr11:33127400-33159200	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr11:33127600-33155000	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr11:33127600-33161400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr11:33129400-33159600	Weak transcription	Primary T cells fromperipheralblood	blood
16	chr11:33129400-33160800	Weak transcription	Placenta	Placenta
17	chr11:33129600-33156200	Weak transcription	Osteobl	bone
18	chr11:33129600-33161800	Weak transcription	Fetal Thymus	thymus
19	chr11:33132000-33180200	Weak transcription	Small Intestine	intestine
20	chr11:33138400-33156800	Weak transcription	Hela-S3	cervix
21	chr11:33138600-33161200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr11:33139000-33160200	Weak transcription	HMEC	breast
23	chr11:33141400-33156400	Weak transcription	NHLF	lung
24	chr11:33141800-33156000	Weak transcription	HUVEC	blood vessel
25	chr11:33143400-33160400	Weak transcription	HepG2	liver
26	chr11:33143400-33180800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr11:33143600-33161600	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr11:33144000-33171600	Weak transcription	Ovary	ovary
29	chr11:33144400-33180600	Weak transcription	Gastric	stomach
30	chr11:33144600-33161400	Weak transcription	Thymus	Thymus
31	chr11:33144800-33155800	Weak transcription	Fetal Lung	lung
32	chr11:33145000-33161400	Weak transcription	Fetal Brain Male	brain
33	chr11:33145200-33156400	Weak transcription	Fetal Stomach	stomach
34	chr11:33145200-33159200	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr11:33145200-33161400	Weak transcription	Rectal Mucosa Donor 29	rectum
36	chr11:33145400-33168600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr11:33145600-33155000	Weak transcription	Lung	lung
38	chr11:33146200-33156400	Weak transcription	Rectal Smooth Muscle	rectum
39	chr11:33146800-33161400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
40	chr11:33147200-33161600	Weak transcription	Fetal Brain Female	brain
41	chr11:33147400-33155200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr11:33147400-33155400	Weak transcription	A549	lung
43	chr11:33147400-33155800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr11:33147400-33156000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr11:33147400-33156400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr11:33147400-33156600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr11:33147400-33161200	Weak transcription	Primary B cells from cord blood	blood
48	chr11:33147600-33155400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr11:33147600-33155400	Weak transcription	HSMM	muscle
50	chr11:33147600-33156000	Weak transcription	Primary T cells from cord blood	blood

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