Variant report

Variant	nsv897635
Chromosome Location	chr11:63674926-63688693
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1372)
CpG islands
(count:1586)
Chromatin interactive
region (count:53)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1372 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:63684556-63684705	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:63685733-63685834	K562	blood:	n/a	n/a
3	ATF2	chr11:63688498-63688921	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr11:63685170-63685550	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr11:63685062-63685545	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr11:63683768-63684386	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr11:63677295-63677737	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr11:63683925-63684279	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr11:63677442-63677555	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr11:63675407-63675555	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr11:63685135-63685939	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr11:63686922-63687047	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr11:63684750-63684925	H1-hESC	embryonic stem cell:	n/a	n/a
14	BCL3	chr11:63685114-63685573	A549	lung:	n/a	chr11:63685539-63685552 chr11:63685535-63685548
15	BCL3	chr11:63683714-63684103	A549	lung:	n/a	n/a
16	BHLHE40	chr11:63684506-63684750	HepG2	liver:	n/a	chr11:63684523-63684539 chr11:63684522-63684538
17	BHLHE40	chr11:63684524-63684788	GM12878	blood:	n/a	n/a
18	BHLHE40	chr11:63685246-63685824	GM12878	blood:	n/a	chr11:63685551-63685560 chr11:63685552-63685561 chr11:63685552-63685561 chr11:63685546-63685562
19	BHLHE40	chr11:63685215-63685728	HepG2	liver:	n/a	chr11:63685551-63685560 chr11:63685552-63685561 chr11:63685552-63685561 chr11:63685546-63685562
20	BHLHE40	chr11:63683951-63684125	K562	blood:	n/a	n/a
21	BHLHE40	chr11:63684516-63684725	K562	blood:	n/a	chr11:63684523-63684539 chr11:63684522-63684538
22	BHLHE40	chr11:63685121-63685914	K562	blood:	n/a	chr11:63685551-63685560 chr11:63685552-63685561 chr11:63685552-63685561 chr11:63685546-63685562
23	BHLHE40	chr11:63685341-63685669	A549	lung:	n/a	chr11:63685551-63685560 chr11:63685552-63685561 chr11:63685552-63685561 chr11:63685546-63685562
24	BHLHE40	chr11:63688602-63688874	K562	blood:	n/a	n/a
25	BRCA1	chr11:63685703-63685926	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr11:63683887-63684191	H1-hESC	embryonic stem cell:	n/a	n/a
27	BRCA1	chr11:63684554-63684719	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr11:63688595-63688765	H1-hESC	embryonic stem cell:	n/a	n/a
29	CBX3	chr11:63688573-63689000	K562	blood:	n/a	n/a
30	CBX3	chr11:63684460-63684742	K562	blood:	n/a	n/a
31	CBX3	chr11:63685301-63686002	K562	blood:	n/a	n/a
32	CCNT2	chr11:63686873-63687131	K562	blood:	n/a	n/a
33	CCNT2	chr11:63683828-63684752	K562	blood:	n/a	chr11:63684679-63684688 chr11:63684223-63684232
34	CCNT2	chr11:63676257-63676375	K562	blood:	n/a	chr11:63676296-63676305
35	CCNT2	chr11:63685334-63686012	K562	blood:	n/a	chr11:63685353-63685362 chr11:63685422-63685431
36	CEBPB	chr11:63686509-63686738	K562	blood:	n/a	n/a
37	CEBPB	chr11:63686481-63686634	HepG2	liver:	n/a	n/a
38	CEBPB	chr11:63683886-63684083	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr11:63687579-63687904	H1-hESC	embryonic stem cell:	n/a	n/a
40	CEBPB	chr11:63687755-63687952	HepG2	liver:	n/a	n/a
41	CEBPB	chr11:63685689-63685746	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr11:63686433-63687120	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr11:63686472-63686649	IMR90	lung:	n/a	n/a
44	CEBPD	chr11:63684519-63684839	HepG2	liver:	n/a	n/a
45	CEBPD	chr11:63686717-63687260	HepG2	liver:	n/a	n/a
46	CEBPD	chr11:63687598-63688129	HepG2	liver:	n/a	n/a
47	CHD1	chr11:63684124-63684245	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD1	chr11:63678273-63678279	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD1	chr11:63685771-63686019	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD1	chr11:63686993-63687661	H1-hESC	embryonic stem cell:	n/a	chr11:63687203-63687213

(count:1586 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:63678193-63678243	T-47D	breast:	n/a
2	chr11:63687247-63687297	SK-N-SH	brain:	n/a
3	chr11:63684597-63684647	HRCEpiC	kidney:	n/a
4	chr11:63679637-63679687	HEEpiC	esophagus:	n/a
5	chr11:63684911-63684961	HCM	heart:	n/a
6	chr11:63688531-63688581	SAEC	small airway:	n/a
7	chr11:63677197-63677247	U87	brain:	n/a
8	chr11:63687937-63687987	K562	blood:	n/a
9	chr11:63687247-63687297	AG10803	skin:	n/a
10	chr11:63687223-63687273	HCT-116	colon:	n/a
11	chr11:63681486-63681536	HRPEpiC	eye:	n/a
12	chr11:63676760-63676810	SAEC	small airway:	n/a
13	chr11:63683019-63683069	HRPEpiC	eye:	n/a
14	chr11:63678193-63678243	HEEpiC	esophagus:	n/a
15	chr11:63684597-63684647	NHDF-neo	bronchial:	n/a
16	chr11:63676611-63676661	HIPEpiC	eye:	n/a
17	chr11:63685905-63685955	HCM	heart:	n/a
18	chr11:63684331-63684381	NHBE	bronchial:	n/a
19	chr11:63683744-63683794	GM19239	blood:	n/a
20	chr11:63679088-63679138	AoSMC	blood vessel:	n/a
21	chr11:63676611-63676661	SK-N-SH_RA	brain:	n/a
22	chr11:63687937-63687987	SK-N-MC	brain:	n/a
23	chr11:63685905-63685955	K562	blood:	n/a
24	chr11:63688531-63688581	Hepatocyte	liver:	n/a
25	chr11:63676611-63676661	ovcar-3	ovarian:	n/a
26	chr11:63676370-63676420	SK-N-MC	brain:	n/a
27	chr11:63683019-63683069	ECC-1	luminal epithelium:	n/a
28	chr11:63677197-63677247	HepG2	liver:	n/a
29	chr11:63678193-63678243	HEK293	kidney:	embryo
30	chr11:63684331-63684381	HCPEpiC	choroid plexus:	n/a
31	chr11:63687247-63687297	Hela-S3	cervix:	n/a
32	chr11:63679637-63679687	IMR90	lung:	fetal
33	chr11:63676370-63676420	HCF	heart:	n/a
34	chr11:63681486-63681536	AoSMC	blood vessel:	n/a
35	chr11:63684106-63684156	AoSMC	blood vessel:	n/a
36	chr11:63679088-63679138	CMK	blood:	n/a
37	chr11:63676485-63676535	MCF10A-Er-Src	breast:	n/a
38	chr11:63684164-63684214	HAEpiC	amniotic membrane:	n/a
39	chr11:63687247-63687297	SAEC	small airway:	n/a
40	chr11:63683744-63683794	BE2_C	brain:	n/a
41	chr11:63679532-63679582	GM12878	blood:	n/a
42	chr11:63684106-63684156	HNPCEpiC	eye:	n/a
43	chr11:63684331-63684381	HRPEpiC	eye:	n/a
44	chr11:63684164-63684214	Hela-S3	cervix:	n/a
45	chr11:63688531-63688581	HIPEpiC	eye:	n/a
46	chr11:63685905-63685955	GM06990	blood:	n/a
47	chr11:63676760-63676810	HepG2	liver:	n/a
48	chr11:63676760-63676810	SK-N-SH_RA	brain:	n/a
49	chr11:63683744-63683794	AG09309	skin:	n/a
50	chr11:63687937-63687987	GM12891	blood:	n/a

(count:53 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:63685870..63687759-chr11:63698939..63701005,2	MCF-7	breast:
2	chr11:63673944..63681438-chr11:63681488..63685981,13	K562	blood:
3	chr11:63674570..63680304-chr11:63681753..63686803,9	MCF-7	breast:
4	chr11:63604465..63605390-chr11:63673837..63675145,8	MCF-7	breast:
5	chr11:63603311..63612666-chr11:63664740..63679491,25	MCF-7	breast:
6	chr1:43312323..43313084-chr11:63685388..63685981,2	Hela-S3	cervix:
7	chr11:63666544..63671236-chr11:63682476..63685803,4	MCF-7	breast:
8	chr11:63686655..63689035-chr11:63752161..63754305,2	K562	blood:
9	chr11:63685552..63686203-chr2:74374074..74375012,2	Hela-S3	cervix:
10	chr11:63684119..63685906-chr11:63753939..63756013,2	MCF-7	breast:
11	chr11:63535779..63536323-chr11:63683262..63684232,2	MCF-7	breast:
12	chr11:63682847..63685544-chr11:63752668..63755278,2	MCF-7	breast:
13	chr11:63683295..63687930-chr11:63703819..63708534,6	MCF-7	breast:
14	chr11:63675134..63677660-chr11:63705818..63708740,2	MCF-7	breast:
15	chr11:63685160..63687637-chr11:63739324..63744119,5	K562	blood:
16	chr11:63683951..63686895-chr11:63953660..63955644,2	MCF-7	breast:
17	chr11:63687365..63689977-chr11:63690538..63692122,2	K562	blood:
18	chr11:63655788..63657631-chr11:63684271..63685886,2	K562	blood:
19	chr11:63604824..63606885-chr11:63683071..63686195,3	K562	blood:
20	chr11:63655944..63659317-chr11:63674342..63677172,3	K562	blood:
21	chr11:63674177..63676175-chr11:63676425..63679947,3	K562	blood:
22	chr11:63534031..63536529-chr11:63677173..63679815,2	K562	blood:
23	chr11:63680773..63683406-chr11:63684086..63687112,3	MCF-7	breast:
24	chr11:63580176..63582428-chr11:63682563..63684680,2	K562	blood:
25	chr11:63605631..63608231-chr11:63683000..63685015,3	MCF-7	breast:
26	chr11:63682242..63690244-chr11:63703955..63713214,18	K562	blood:
27	chr11:63686117..63687748-chr11:63991858..63993685,2	K562	blood:
28	chr11:63682343..63688338-chr11:63931257..63935493,5	K562	blood:
29	chr11:63684384..63686159-chr11:63693977..63696781,2	MCF-7	breast:
30	chr11:63685675..63686195-chr2:136874998..136875975,2	Hela-S3	cervix:
31	chr11:63683018..63687693-chr11:63704987..63708969,9	MCF-7	breast:
32	chr11:63686068..63688913-chr11:63752506..63754962,2	MCF-7	breast:
33	chr11:63687502..63689214-chr11:63695496..63697632,2	MCF-7	breast:
34	chr11:63673944..63681438-chr11:63681488..63685981,13	K562	blood:
35	chr11:63684393..63687142-chr11:63694505..63697454,4	MCF-7	breast:
36	chr11:63683405..63684071-chr11:63712749..63713693,2	MCF-7	breast:
37	chr11:63605250..63607360-chr11:63674214..63677570,3	MCF-7	breast:
38	chr11:63683456..63690158-chr11:63704393..63714412,17	K562	blood:
39	chr11:63683781..63686730-chr11:63932079..63933586,2	K562	blood:
40	chr11:63684351..63687811-chr11:63692947..63696202,6	K562	blood:
41	chr11:63668978..63670903-chr11:63681727..63683409,2	K562	blood:
42	chr11:63605131..63609420-chr11:63682910..63687369,4	MCF-7	breast:
43	chr11:63674570..63680304-chr11:63681753..63686803,9	MCF-7	breast:
44	chr11:63579193..63582428-chr11:63682051..63685961,4	K562	blood:
45	chr11:63675618..63677847-chr11:63705967..63707596,2	K562	blood:
46	chr11:63682437..63684177-chr8:101963345..101965664,2	MCF-7	breast:
47	chr11:63535119..63536110-chr11:63688278..63689081,3	K562	blood:
48	chr11:63684287..63687288-chr11:63687997..63690522,4	MCF-7	breast:
49	chr11:63687862..63689839-chr11:63702053..63703674,2	MCF-7	breast:
50	chr11:63683426..63687637-chr11:63739381..63744575,6	K562	blood:

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MARK2	hsa-miR-193b-3p	chr11:63677938-63677944
2	MARK2	hsa-miR-193b-3p	chr11:63677923-63677945

Variant related genes	Relation type
RCOR2	TF binding region
RCOR2	CpG island
ENSG00000167771	chromatin interactions
ENSG00000121966	chromatin interactions
ENSG00000149761	chromatin interactions
ENSG00000164924	chromatin interactions
ENSG00000133315	chromatin interactions
ENSG00000168439	chromatin interactions
ENSG00000110583	chromatin interactions
ENSG00000256100	chromatin interactions
ENSG00000167770	chromatin interactions
ENSG00000176340	chromatin interactions
ENSG00000168005	chromatin interactions
ENSG00000072518	chromatin interactions
ENSG00000149743	chromatin interactions
ENSG00000255651	chromatin interactions

Extended variants
information (count: 552 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:552 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs161053	chr11:63674926-63674927	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs557815574	chr11:63674949-63674950	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs147484233	chr11:63674950-63674951	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs527293217	chr11:63674953-63674954	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs559328085	chr11:63674981-63674982	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs547233234	chr11:63675006-63675007	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs34361084	chr11:63675044-63675045	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs375914500	chr11:63675081-63675082	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs541932844	chr11:63675105-63675106	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs562290872	chr11:63675114-63675115	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs531038582	chr11:63675122-63675123	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs74928381	chr11:63675126-63675127	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs564665762	chr11:63675133-63675134	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs533686723	chr11:63675139-63675140	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs546572630	chr11:63675182-63675183	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs566495952	chr11:63675234-63675235	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs77799837	chr11:63675245-63675246	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs182183289	chr11:63675308-63675309	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs549127745	chr11:63675318-63675319	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs569031593	chr11:63675392-63675393	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs537687287	chr11:63675461-63675462	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs557942658	chr11:63675477-63675478	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs535540416	chr11:63675522-63675523	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs367793164	chr11:63675554-63675555	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs533859148	chr11:63675560-63675561	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs552916983	chr11:63675577-63675578	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs185207973	chr11:63675625-63675626	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs541896198	chr11:63675626-63675627	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs371402571	chr11:63675627-63675628	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs547460316	chr11:63675637-63675638	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs575783427	chr11:63675677-63675678	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs36062767	chr11:63675681-63675682	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs199818911	chr11:63675688-63675689	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs55767673	chr11:63675772-63675773	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs371563761	chr11:63675796-63675797	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs190807235	chr11:63675818-63675819	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs567091790	chr11:63675849-63675850	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs540943133	chr11:63675874-63675875	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs532735643	chr11:63675918-63675919	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs118063077	chr11:63675949-63675950	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs528945007	chr11:63675956-63675957	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs565855256	chr11:63675970-63675971	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs568820496	chr11:63675972-63675973	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs568992266	chr11:63675994-63675995	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs11231637	chr11:63676067-63676068	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs183361479	chr11:63676085-63676086	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs571437615	chr11:63676150-63676151	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs533822943	chr11:63676185-63676186	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs553675676	chr11:63676197-63676198	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs7940152	chr11:63676239-63676240	Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21785460	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	22522925	CNVD
Hodgkin''s lymphoma	17606441	CNVD

Chromatin state (count:1311 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63657400-63677800	Strong transcription	Dnd41	blood
2	chr11:63658800-63678400	Strong transcription	Primary B cells from cord blood	blood
3	chr11:63659400-63678600	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr11:63659600-63680600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr11:63659800-63678000	Strong transcription	Rectal Mucosa Donor 31	rectum
6	chr11:63659800-63682400	Strong transcription	Fetal Intestine Large	intestine
7	chr11:63660800-63678000	Strong transcription	Primary B cells from peripheral blood	blood
8	chr11:63661000-63677800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr11:63661000-63678000	Strong transcription	Liver	Liver
10	chr11:63661200-63678600	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr11:63661400-63675800	Strong transcription	Rectal Mucosa Donor 29	rectum
12	chr11:63661600-63677400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:63661600-63678000	Strong transcription	Thymus	Thymus
14	chr11:63661600-63678000	Strong transcription	NHEK	skin
15	chr11:63662200-63677400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr11:63662400-63675400	Strong transcription	Rectal Smooth Muscle	rectum
17	chr11:63662400-63675600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr11:63662400-63675800	Strong transcription	NHLF	lung
19	chr11:63662400-63677800	Strong transcription	Esophagus	oesophagus
20	chr11:63662400-63679200	Strong transcription	Colonic Mucosa	Colon
21	chr11:63662400-63679200	Strong transcription	Gastric	stomach
22	chr11:63662600-63675000	Strong transcription	Colon Smooth Muscle	Colon
23	chr11:63662600-63675600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr11:63662800-63676200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr11:63663600-63676600	Strong transcription	Aorta	Aorta
26	chr11:63664000-63675400	Strong transcription	Skeletal Muscle Male	skeletal muscle
27	chr11:63664000-63676000	Weak transcription	Right Atrium	heart
28	chr11:63664000-63676800	Strong transcription	HMEC	breast
29	chr11:63664000-63677400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr11:63664000-63678600	Strong transcription	Primary T helper cells PMA-I stimulated	--
31	chr11:63664200-63675200	Strong transcription	Adipose Nuclei	Adipose
32	chr11:63664200-63677600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr11:63664200-63678400	Strong transcription	Sigmoid Colon	Sigmoid Colon
34	chr11:63664200-63679200	Strong transcription	Primary T cells from cord blood	blood
35	chr11:63664400-63676800	Strong transcription	Duodenum Mucosa	Duodenum
36	chr11:63664400-63678800	Strong transcription	Primary T cells fromperipheralblood	blood
37	chr11:63664400-63679200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr11:63664600-63680400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr11:63665000-63676000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr11:63665600-63675400	Strong transcription	Left Ventricle	heart
41	chr11:63665800-63676000	Strong transcription	Brain Germinal Matrix	brain
42	chr11:63666000-63675400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
43	chr11:63666400-63677800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
44	chr11:63669600-63683200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr11:63670000-63683200	Weak transcription	K562	blood
46	chr11:63670000-63683400	Weak transcription	HSMM	muscle
47	chr11:63670600-63676000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr11:63670800-63676400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr11:63670800-63681600	Weak transcription	GM12878-XiMat	blood
50	chr11:63671000-63675800	Strong transcription	Primary hematopoietic stem cells short term culture	blood

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