Variant report

Variant	nsv897690
Chromosome Location	chr11:64118422-64135298
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1360)
CpG islands
(count:1590)
Chromatin interactive
region (count:91)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1360 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:64122629-64122937	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:64122701-64122980	K562	blood:	n/a	n/a
3	ARID3A	chr11:64126785-64126912	HepG2	liver:	n/a	n/a
4	ATF2	chr11:64122543-64122807	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF3	chr11:64122555-64123002	A549	lung:	n/a	n/a
6	ATF3	chr11:64122574-64122964	K562	blood:	n/a	n/a
7	ATF3	chr11:64122518-64123040	K562	blood:	n/a	n/a
8	ATF3	chr11:64126383-64126784	K562	blood:	n/a	chr11:64126630-64126639
9	BACH1	chr11:64126314-64126605	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr11:64126825-64126867	K562	blood:	n/a	n/a
11	BACH1	chr11:64122562-64123110	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr11:64122619-64122877	GM12878	blood:	n/a	chr11:64122783-64122794
13	BCL3	chr11:64126182-64126831	GM12878	blood:	n/a	chr11:64126636-64126649
14	BCL3	chr11:64122444-64123302	A549	lung:	n/a	n/a
15	BCL3	chr11:64126585-64127147	A549	lung:	n/a	chr11:64126636-64126649
16	BCL3	chr11:64122582-64123022	A549	lung:	n/a	n/a
17	BCLAF1	chr11:64122478-64122945	GM12878	blood:	n/a	n/a
18	BHLHE40	chr11:64122765-64122854	A549	lung:	n/a	n/a
19	BHLHE40	chr11:64125841-64125871	GM12878	blood:	n/a	n/a
20	BHLHE40	chr11:64125554-64126887	HepG2	liver:	n/a	chr11:64126316-64126332 chr11:64126780-64126796 chr11:64126632-64126648 chr11:64126633-64126649
21	BHLHE40	chr11:64126199-64126787	GM12878	blood:	n/a	chr11:64126316-64126332 chr11:64126632-64126648 chr11:64126633-64126649
22	BHLHE40	chr11:64126393-64126734	HepG2	liver:	n/a	chr11:64126632-64126648 chr11:64126633-64126649
23	BHLHE40	chr11:64127645-64127873	GM12878	blood:	n/a	n/a
24	BHLHE40	chr11:64124049-64124329	K562	blood:	n/a	n/a
25	BHLHE40	chr11:64122569-64123102	K562	blood:	n/a	n/a
26	BHLHE40	chr11:64122624-64122884	GM12878	blood:	n/a	n/a
27	BHLHE40	chr11:64126413-64126657	A549	lung:	n/a	chr11:64126632-64126648 chr11:64126633-64126649
28	BHLHE40	chr11:64124102-64124216	HepG2	liver:	n/a	n/a
29	BHLHE40	chr11:64125430-64126924	K562	blood:	n/a	chr11:64126316-64126332 chr11:64126780-64126796 chr11:64126632-64126648 chr11:64126633-64126649
30	BRCA1	chr11:64122617-64122927	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr11:64125398-64125705	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr11:64122817-64122893	HepG2	liver:	n/a	n/a
33	CBX3	chr11:64125256-64126131	K562	blood:	n/a	n/a
34	CBX3	chr11:64122441-64123382	K562	blood:	n/a	n/a
35	CBX3	chr11:64126538-64126932	K562	blood:	n/a	n/a
36	CBX3	chr11:64123798-64124338	K562	blood:	n/a	n/a
37	CBX3	chr11:64124001-64124323	K562	blood:	n/a	n/a
38	CCNT2	chr11:64125401-64125982	K562	blood:	n/a	n/a
39	CCNT2	chr11:64122581-64122986	K562	blood:	n/a	n/a
40	CCNT2	chr11:64126336-64126906	K562	blood:	n/a	n/a
41	CEBPB	chr11:64134631-64134831	IMR90	lung:	n/a	n/a
42	CEBPB	chr11:64122618-64122799	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr11:64125425-64125688	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr11:64122575-64122775	HepG2	liver:	n/a	n/a
45	CEBPB	chr11:64122657-64122931	A549	lung:	n/a	n/a
46	CEBPB	chr11:64127254-64127258	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr11:64122538-64123012	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr11:64122696-64122881	K562	blood:	n/a	n/a
49	CEBPB	chr11:64122563-64122944	K562	blood:	n/a	n/a
50	CEBPD	chr11:64126351-64126807	HepG2	liver:	n/a	n/a

(count:1590 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:64135217-64135267	HCM	heart:	n/a
2	chr11:64126431-64126481	AG04449	skin:	fetal
3	chr11:64120685-64120735	T-47D	breast:	n/a
4	chr11:64124778-64124828	RPTEC	kidney:	n/a
5	chr11:64135217-64135267	HCM	heart:	n/a
6	chr11:64126431-64126481	AG04449	skin:	fetal
7	chr11:64120685-64120735	T-47D	breast:	n/a
8	chr11:64124778-64124828	RPTEC	kidney:	n/a
9	chr11:64127816-64127866	SAEC	small airway:	n/a
10	chr11:64120728-64120778	BE2_C	brain:	n/a
11	chr11:64126457-64126507	K562	blood:	n/a
12	chr11:64120286-64120336	IMR90	lung:	fetal
13	chr11:64126102-64126152	HNPCEpiC	eye:	n/a
14	chr11:64124778-64124828	HepG2	liver:	n/a
15	chr11:64126452-64126502	HCPEpiC	choroid plexus:	n/a
16	chr11:64126440-64126490	HMEC	breast:	n/a
17	chr11:64120036-64120086	HRE	kidney:	n/a
18	chr11:64126457-64126507	SAEC	small airway:	n/a
19	chr11:64128973-64129023	AG04450	lung:	fetal
20	chr11:64133067-64133117	H1-hESC	embryonic stem cell:	embryo
21	chr11:64120623-64120673	PrEC	prostate:	n/a
22	chr11:64120685-64120735	PFSK-1	brain:	n/a
23	chr11:64126392-64126442	U87	brain:	n/a
24	chr11:64126457-64126507	GM12892	blood:	n/a
25	chr11:64126431-64126481	BE2_C	brain:	n/a
26	chr11:64120313-64120363	NHBE	bronchial:	n/a
27	chr11:64120313-64120363	AoSMC	blood vessel:	n/a
28	chr11:64120623-64120673	U87	brain:	n/a
29	chr11:64119977-64120027	GM12892	blood:	n/a
30	chr11:64127791-64127841	HCF	heart:	n/a
31	chr11:64127816-64127866	HCT-116	colon:	n/a
32	chr11:64120656-64120706	HepG2	liver:	n/a
33	chr11:64126440-64126490	IMR90	lung:	fetal
34	chr11:64120354-64120404	U87	brain:	n/a
35	chr11:64126102-64126152	HAEpiC	amniotic membrane:	n/a
36	chr11:64128973-64129023	HRE	kidney:	n/a
37	chr11:64119977-64120027	MCF-7	breast:	n/a
38	chr11:64128973-64129023	PrEC	prostate:	n/a
39	chr11:64126392-64126442	ECC-1	luminal epithelium:	n/a
40	chr11:64128973-64129023	GM06990	blood:	n/a
41	chr11:64133067-64133117	ovcar-3	ovarian:	n/a
42	chr11:64126431-64126481	HCM	heart:	n/a
43	chr11:64120728-64120778	ovcar-3	ovarian:	n/a
44	chr11:64126340-64126390	ECC-1	luminal epithelium:	n/a
45	chr11:64120313-64120363	GM19239	blood:	n/a
46	chr11:64126457-64126507	SKMC	muscle:	n/a
47	chr11:64126440-64126490	HRE	kidney:	n/a
48	chr11:64120728-64120778	SKMC	muscle:	n/a
49	chr11:64126806-64126856	IMR90	lung:	fetal
50	chr11:64120036-64120086	IMR90	lung:	fetal

(count:91 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:63972047..63977847-chr11:64122012..64128099,8	K562	blood:
2	chr11:64017685..64020898-chr11:64124130..64127721,3	MCF-7	breast:
3	chr11:64013219..64015249-chr11:64126039..64128658,2	K562	blood:
4	chr11:64038885..64039522-chr11:64122350..64122916,2	MCF-7	breast:
5	chr11:64130858..64133466-chr11:64138873..64141793,3	K562	blood:
6	chr11:64069494..64072253-chr11:64119496..64122184,3	MCF-7	breast:
7	chr11:64004012..64005762-chr11:64124323..64126720,2	MCF-7	breast:
8	chr11:64119430..64124364-chr11:64124831..64128743,7	MCF-7	breast:
9	chr11:64008386..64010951-chr11:64125361..64127756,4	MCF-7	breast:
10	chr11:64080620..64083894-chr11:64124180..64128334,3	MCF-7	breast:
11	chr11:64013360..64015283-chr11:64125680..64128243,2	MCF-7	breast:
12	chr11:64007008..64012234-chr11:64122125..64125548,6	K562	blood:
13	chr11:64082853..64088243-chr11:64119014..64129028,17	MCF-7	breast:
14	chr11:64111304..64115119-chr11:64121660..64123596,3	MCF-7	breast:
15	chr11:64122365..64123400-chr11:64216043..64217247,4	MCF-7	breast:
16	chr11:64083884..64087111-chr11:64122613..64125426,3	K562	blood:
17	chr11:64073021..64075424-chr11:64122972..64125774,2	MCF-7	breast:
18	chr11:64084510..64086819-chr11:64119650..64121961,3	MCF-7	breast:
19	chr11:64109671..64110552-chr11:64122307..64123186,2	K562	blood:
20	chr11:64013318..64016582-chr11:64121712..64124866,3	MCF-7	breast:
21	chr11:64106209..64107766-chr11:64119904..64122675,2	MCF-7	breast:
22	chr11:64000008..64002901-chr11:64125113..64127418,2	MCF-7	breast:
23	chr11:64071859..64073528-chr11:64131116..64134089,2	K562	blood:
24	chr11:63995120..63997968-chr11:64121307..64123121,2	K562	blood:
25	chr11:64109695..64112245-chr11:64123699..64125269,2	MCF-7	breast:
26	chr11:64122681..64124729-chr11:64134765..64136961,2	K562	blood:
27	chr11:64109688..64110714-chr11:64122196..64123136,4	MCF-7	breast:
28	chr11:64132740..64134485-chr11:64152272..64154875,2	MCF-7	breast:
29	chr11:64124540..64126165-chr11:64416805..64418709,2	MCF-7	breast:
30	chr11:64122719..64124795-chr11:64130690..64132414,2	K562	blood:
31	chr11:64014412..64017263-chr11:64129523..64131741,2	MCF-7	breast:
32	chr11:64073125..64074029-chr11:64122872..64123422,2	MCF-7	breast:
33	chr11:64119430..64124364-chr11:64124831..64128743,7	MCF-7	breast:
34	chr11:64052659..64056055-chr11:64125689..64127630,3	MCF-7	breast:
35	chr11:64125259..64126829-chr11:64127521..64129918,2	MCF-7	breast:
36	chr11:64126546..64128128-chr11:64543926..64545937,2	K562	blood:
37	chr11:64081246..64082787-chr11:64121396..64124105,2	K562	blood:
38	chr11:64018758..64019464-chr11:64122319..64123422,3	K562	blood:
39	chr11:64124989..64126699-chr11:64216058..64218143,2	K562	blood:
40	chr11:64108003..64110489-chr11:64126101..64127976,2	MCF-7	breast:
41	chr11:64071691..64076218-chr11:64119080..64123328,5	MCF-7	breast:
42	chr11:64073758..64075517-chr11:64122696..64124221,2	K562	blood:
43	chr11:64109881..64112376-chr11:64133926..64136409,3	K562	blood:
44	chr11:64123441..64125427-chr11:64411243..64414199,2	K562	blood:
45	chr11:64051486..64055490-chr11:64121214..64124233,3	MCF-7	breast:
46	chr11:64052517..64054991-chr11:64119891..64124085,3	K562	blood:
47	chr11:64062668..64065011-chr11:64124225..64126837,3	MCF-7	breast:
48	chr11:64123857..64124575-chr11:64420219..64421131,3	K562	blood:
49	chr11:64083616..64085818-chr11:64128442..64130282,2	K562	blood:
50	chr11:64109964..64110933-chr11:64124074..64124659,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPS6KA4-1	chr11:64122815-64123100	NONHSAT021990
2	lnc-RPS6KA4-1	chr11:64124511-64125003	NONHSAT021990

No data

Variant related genes	Relation type
MIR1237	TF binding region
CCDC88B	TF binding region
RPS6KA4	TF binding region
MIR1237	CpG island
CCDC88B	CpG island
RPS6KA4	CpG island
ENSG00000173264	chromatin interactions
ENSG00000181908	chromatin interactions
ENSG00000256116	chromatin interactions
ENSG00000168066	chromatin interactions
ENSG00000149782	chromatin interactions
ENSG00000149781	chromatin interactions
ENSG00000110011	chromatin interactions
ENSG00000182450	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000257086	chromatin interactions
ENSG00000168071	chromatin interactions
ENSG00000002330	chromatin interactions
ENSG00000170242	chromatin interactions
ENSG00000173113	chromatin interactions
ENSG00000126432	chromatin interactions
ENSG00000162302	chromatin interactions
ENSG00000237410	chromatin interactions
ENSG00000219435	chromatin interactions
ENSG00000173511	chromatin interactions
ENSG00000173486	chromatin interactions
ENSG00000149761	chromatin interactions
ENSG00000256940	chromatin interactions
ENSG00000173153	chromatin interactions
ENSG00000173457	chromatin interactions
ENSG00000068831	chromatin interactions
ENSG00000008988	chromatin interactions
ENSG00000221273	chromatin interactions
ENSG00000207024	chromatin interactions

Extended variants
information (count: 765 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:765 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs614047	chr11:64118422-64118423	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs548473460	chr11:64118517-64118518	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
3	rs113475373	chr11:64118523-64118524	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs562438345	chr11:64118524-64118525	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs531100340	chr11:64118536-64118537	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs183948223	chr11:64118593-64118594	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
7	rs550595539	chr11:64118594-64118595	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs374768393	chr11:64118603-64118604	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
9	rs531261884	chr11:64118617-64118618	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs367801253	chr11:64118636-64118637	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs201663939	chr11:64118645-64118646	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs376735322	chr11:64118647-64118648	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs74794644	chr11:64118648-64118649	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs539397204	chr11:64118651-64118652	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs546731887	chr11:64118661-64118662	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs149543205	chr11:64118669-64118670	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs566542432	chr11:64118705-64118706	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs369314085	chr11:64118766-64118767	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs548984869	chr11:64118789-64118790	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs575544241	chr11:64118790-64118791	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs537755025	chr11:64118817-64118818	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs7950922	chr11:64118849-64118850	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs576843427	chr11:64118856-64118857	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs545764496	chr11:64118882-64118883	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs553078486	chr11:64118883-64118884	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs188690855	chr11:64118902-64118903	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs542449461	chr11:64118908-64118909	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs375271628	chr11:64118912-64118913	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs531085048	chr11:64118934-64118935	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs138291357	chr11:64118953-64118954	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs148681130	chr11:64118982-64118983	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs564733972	chr11:64118986-64118987	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs369167306	chr11:64118987-64118988	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs372946485	chr11:64119030-64119031	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs199796609	chr11:64119053-64119054	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs369212327	chr11:64119059-64119060	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs112667752	chr11:64119060-64119061	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs377511345	chr11:64119062-64119063	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs371395168	chr11:64119064-64119065	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs113903689	chr11:64119085-64119086	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs566614952	chr11:64119102-64119103	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs201716466	chr11:64119103-64119104	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs191266702	chr11:64119119-64119120	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs568968646	chr11:64119173-64119174	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs538011450	chr11:64119192-64119193	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs557789275	chr11:64119277-64119278	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs571186146	chr11:64119283-64119284	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs539482881	chr11:64119284-64119285	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs552939308	chr11:64119285-64119286	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs571379	chr11:64119318-64119319	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21785460	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Melanoma	20877625	CNVD
Autism	22209245	CNVD

Chromatin state (count:1370 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64110000-64122400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:64110200-64125000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr11:64110200-64125200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr11:64110800-64121400	Strong transcription	Primary T cells from cord blood	blood
5	chr11:64110800-64122400	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:64110800-64122400	Weak transcription	Lung	lung
7	chr11:64110800-64122800	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr11:64110800-64123400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr11:64111000-64121200	Weak transcription	Liver	Liver
10	chr11:64111000-64121800	Weak transcription	Right Ventricle	heart
11	chr11:64111000-64122400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr11:64111000-64122400	Weak transcription	Colon Smooth Muscle	Colon
13	chr11:64111000-64122400	Weak transcription	Rectal Smooth Muscle	rectum
14	chr11:64111000-64122400	Weak transcription	Right Atrium	heart
15	chr11:64111000-64122600	Weak transcription	Brain Cingulate Gyrus	brain
16	chr11:64111000-64124200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr11:64111000-64125000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr11:64111200-64121800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr11:64111200-64121800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr11:64111200-64122400	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr11:64111400-64119000	Strong transcription	Thymus	Thymus
22	chr11:64111400-64122400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
23	chr11:64111400-64122600	Weak transcription	Gastric	stomach
24	chr11:64111800-64125000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
25	chr11:64112000-64125000	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr11:64112200-64120200	Weak transcription	Fetal Intestine Small	intestine
27	chr11:64112200-64120200	Weak transcription	Fetal Stomach	stomach
28	chr11:64113800-64125000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr11:64115000-64121600	Strong transcription	Primary monocytes fromperipheralblood	blood
30	chr11:64115000-64121600	Strong transcription	Monocytes-CD14+_RO01746	blood
31	chr11:64115000-64121800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:64115000-64121800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr11:64115000-64122400	Weak transcription	K562	blood
34	chr11:64115400-64125600	Weak transcription	GM12878-XiMat	blood
35	chr11:64115800-64125000	Strong transcription	Primary neutrophils fromperipheralblood	blood
36	chr11:64116000-64122000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr11:64116200-64119800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
38	chr11:64116200-64121800	Weak transcription	A549	lung
39	chr11:64116200-64122400	Weak transcription	Brain Substantia Nigra	brain
40	chr11:64116200-64122400	Weak transcription	Duodenum Mucosa	Duodenum
41	chr11:64116200-64122400	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr11:64116400-64118600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr11:64116400-64119200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr11:64116400-64121600	Strong transcription	Primary B cells from peripheral blood	blood
45	chr11:64116400-64122400	Weak transcription	Brain Hippocampus Middle	brain
46	chr11:64116600-64118800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr11:64116600-64122600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr11:64116800-64118800	Strong transcription	Fetal Thymus	thymus
49	chr11:64116800-64120800	Strong transcription	Spleen	Spleen
50	chr11:64116800-64122400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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