Variant report

Variant	nsv898624
Chromosome Location	chr12:4757474-4769876
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:463)
CpG islands
(count:612)
Chromatin interactive
region (count:19)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:463 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:4757430-4758315	K562	blood:	n/a	n/a
2	ATF2	chr12:4757972-4758620	GM12878	blood:	n/a	n/a
3	ATF2	chr12:4758070-4758634	GM12878	blood:	n/a	n/a
4	ATF2	chr12:4757999-4758491	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCLAF1	chr12:4757913-4758630	GM12878	blood:	n/a	chr12:4758114-4758123
6	BCLAF1	chr12:4757941-4758505	GM12878	blood:	n/a	chr12:4758114-4758123
7	BHLHE40	chr12:4757362-4757603	GM12878	blood:	n/a	n/a
8	BHLHE40	chr12:4758013-4758504	GM12878	blood:	n/a	n/a
9	BHLHE40	chr12:4757761-4758471	K562	blood:	n/a	n/a
10	BRCA1	chr12:4757522-4758889	Hela-S3	cervix:	n/a	n/a
11	CCNT2	chr12:4757956-4758363	K562	blood:	n/a	n/a
12	CEBPB	chr12:4759955-4760222	HepG2	liver:	n/a	chr12:4760126-4760137 chr12:4760126-4760139 chr12:4760127-4760138
13	CEBPB	chr12:4757830-4757894	K562	blood:	n/a	n/a
14	CEBPB	chr12:4759436-4759663	HepG2	liver:	n/a	n/a
15	CEBPB	chr12:4758026-4758412	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr12:4760017-4760288	K562	blood:	n/a	chr12:4760126-4760137 chr12:4760126-4760139 chr12:4760127-4760138
17	CEBPD	chr12:4758143-4758473	HepG2	liver:	n/a	n/a
18	CHD1	chr12:4757476-4758871	H1-hESC	embryonic stem cell:	n/a	n/a
19	CHD2	chr12:4757626-4758623	Hela-S3	cervix:	n/a	n/a
20	CHD2	chr12:4757737-4757887	K562	blood:	n/a	n/a
21	CHD2	chr12:4758193-4758446	HepG2	liver:	n/a	n/a
22	CHD2	chr12:4758021-4758466	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD2	chr12:4758078-4758446	GM12878	blood:	n/a	n/a
24	CREB1	chr12:4758078-4758323	A549	lung:	n/a	n/a
25	CREB1	chr12:4758112-4758477	A549	lung:	n/a	n/a
26	CREB1	chr12:4757960-4758541	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr12:4764900-4765050	NHEK	skin:	n/a	n/a
28	CTCF	chr12:4758162-4758291	GM12878	blood:	n/a	n/a
29	CTCF	chr12:4762420-4762570	HVMF	connective:	n/a	n/a
30	CTCF	chr12:4762500-4762650	HEK293	kidney:	n/a	n/a
31	CTCF	chr12:4762400-4762550	HRPEpiC	eye:	n/a	n/a
32	CTCF	chr12:4762500-4762650	AG10803	skin:	n/a	n/a
33	CTCF	chr12:4758165-4758206	Spleen_OC	spleen:	n/a	n/a
34	CTCF	chr12:4758079-4758321	K562	blood:	n/a	n/a
35	CTCF	chr12:4762420-4762570	HRPEpiC	eye:	n/a	n/a
36	CTCF	chr12:4757660-4757810	A549	lung:	n/a	n/a
37	CTCF	chr12:4757980-4758130	NHLF	lung:	n/a	n/a
38	CTCF	chr12:4762460-4762610	HA-sp	spinal cord:	n/a	n/a
39	CTCF	chr12:4762460-4762610	HCPEpiC	choroid plexus:	n/a	n/a
40	CTCF	chr12:4757748-4757758	K562	blood:	n/a	n/a
41	CTCF	chr12:4762380-4762530	HPAF	blood vessel:	n/a	n/a
42	CTCF	chr12:4762440-4762590	AG04449	skin:	n/a	n/a
43	CTCF	chr12:4758740-4758890	Caco-2	colon:	n/a	n/a
44	CTCF	chr12:4758195-4758285	Kidney_OC	kidney:	n/a	n/a
45	CTCF	chr12:4762460-4762610	RPTEC	kidney:	n/a	n/a
46	CTCF	chr12:4762380-4762530	Caco-2	colon:	n/a	n/a
47	CTCF	chr12:4762360-4762510	AG04450	lung:	n/a	n/a
48	CTCF	chr12:4762380-4762530	HMEC	breast:	n/a	n/a
49	E2F4	chr12:4757587-4758428	MCF10A-Er-Src	breast:	n/a	chr12:4758200-4758209
50	E2F6	chr12:4757614-4757761	K562	blood:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:4758250-4758300	SK-N-MC	brain:	n/a
2	chr12:4762206-4762256	PrEC	prostate:	n/a
3	chr12:4758250-4758300	SK-N-MC	brain:	n/a
4	chr12:4762206-4762256	PrEC	prostate:	n/a
5	chr12:4758424-4758474	LNCaP	prostate:	n/a
6	chr12:4758272-4758322	AoSMC	blood vessel:	n/a
7	chr12:4758424-4758474	AG04449	skin:	fetal
8	chr12:4757759-4757809	GM12892	blood:	n/a
9	chr12:4758217-4758267	GM12892	blood:	n/a
10	chr12:4758272-4758322	HRPEpiC	eye:	n/a
11	chr12:4757728-4757778	U87	brain:	n/a
12	chr12:4757759-4757809	HUVEC	blood vessel:	n/a
13	chr12:4758201-4758251	SKMC	muscle:	n/a
14	chr12:4757728-4757778	PANC-1	pancreas:	n/a
15	chr12:4758201-4758251	SK-N-MC	brain:	n/a
16	chr12:4758496-4758546	HPAEpiC	pulmonary alveolar:	n/a
17	chr12:4758250-4758300	HepG2	liver:	n/a
18	chr12:4758424-4758474	HUVEC	blood vessel:	n/a
19	chr12:4758272-4758322	HAEpiC	amniotic membrane:	n/a
20	chr12:4758424-4758474	MCF-7	breast:	n/a
21	chr12:4758201-4758251	Hela-S3	cervix:	n/a
22	chr12:4757728-4757778	HAEpiC	amniotic membrane:	n/a
23	chr12:4757728-4757778	ProgFib	skin:	n/a
24	chr12:4758250-4758300	HAEpiC	amniotic membrane:	n/a
25	chr12:4758424-4758474	ovcar-3	ovarian:	n/a
26	chr12:4757717-4757767	Jurkat	blood:	n/a
27	chr12:4762206-4762256	NHBE	bronchial:	n/a
28	chr12:4757759-4757809	AG04450	lung:	fetal
29	chr12:4758217-4758267	T-47D	breast:	n/a
30	chr12:4762206-4762256	NHDF-neo	bronchial:	n/a
31	chr12:4758424-4758474	GM19239	blood:	n/a
32	chr12:4762206-4762256	MCF-7	breast:	n/a
33	chr12:4758424-4758474	NH-A	brain:	n/a
34	chr12:4758272-4758322	HMEC	breast:	n/a
35	chr12:4757759-4757809	AG09319	gingival:	n/a
36	chr12:4757728-4757778	HPAEpiC	pulmonary alveolar:	n/a
37	chr12:4758496-4758546	GM19239	blood:	n/a
38	chr12:4758496-4758546	HL-60	blood:	n/a
39	chr12:4758217-4758267	AG04450	lung:	fetal
40	chr12:4758496-4758546	SKMC	muscle:	n/a
41	chr12:4762206-4762256	HepG2	liver:	n/a
42	chr12:4758496-4758546	Jurkat	blood:	n/a
43	chr12:4762206-4762256	HCT-116	colon:	n/a
44	chr12:4758217-4758267	HCF	heart:	n/a
45	chr12:4757717-4757767	HEEpiC	esophagus:	n/a
46	chr12:4757717-4757767	HRCEpiC	kidney:	n/a
47	chr12:4757717-4757767	T-47D	breast:	n/a
48	chr12:4758424-4758474	NB4	blood:	n/a
49	chr12:4758201-4758251	PrEC	prostate:	n/a
50	chr12:4758217-4758267	ovcar-3	ovarian:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:4758240..4760595-chr12:4768074..4769785,2	K562	blood:
2	chr12:4758381..4761405-chr12:4778974..4782071,3	K562	blood:
3	chr12:4762342..4764303-chr12:4764418..4767058,2	K562	blood:
4	chr12:4751073..4755821-chr12:4757118..4761577,5	MCF-7	breast:
5	chr12:4757018..4762059-chr12:4764285..4767290,6	K562	blood:
6	chr12:4754845..4760714-chr12:4761830..4765057,7	MCF-7	breast:
7	chr12:4762857..4765662-chr12:4767685..4769794,2	K562	blood:
8	chr12:4757537..4758351-chr2:9983167..9983703,2	Hela-S3	cervix:
9	chr12:4757989..4759732-chr12:4759874..4761785,2	MCF-7	breast:
10	chr12:4757063..4759938-chr12:4760465..4764038,5	K562	blood:
11	chr12:4756861..4759668-chr12:4760395..4765208,7	MCF-7	breast:
12	chr12:4754845..4760714-chr12:4761830..4765057,7	MCF-7	breast:
13	chr12:4757063..4759938-chr12:4760465..4764038,5	K562	blood:
14	chr12:4757018..4762059-chr12:4764285..4767290,6	K562	blood:
15	chr12:4757573..4759938-chr12:4760465..4764276,3	K562	blood:
16	chr12:4756861..4759668-chr12:4760395..4765208,7	MCF-7	breast:
17	chr12:4757573..4759938-chr12:4760465..4764276,3	K562	blood:
18	chr12:4762342..4764303-chr12:4764418..4767058,2	K562	blood:
19	chr12:4762857..4765662-chr12:4767685..4769794,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AKAP3-3	chr12:4757620-4758174	NONHSAT025968
2	lnc-AKAP3-3	chr12:4756240-4758165	NONHSAT025970
3	lnc-AKAP3-3	chr12:4757911-4758213	NONHSAT025967

No data

Variant related genes	Relation type
NDUFA9	TF binding region
ENSG00000255639	TF binding region
AKAP3	TF binding region
NDUFA9	CpG island
ENSG00000255639	CpG island
AKAP3	CpG island
ENSG00000256381	chromatin interactions
ENSG00000111254	chromatin interactions
ENSG00000115750	chromatin interactions
ENSG00000255639	chromatin interactions
ENSG00000139180	chromatin interactions

Extended variants
information (count: 473 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:473 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs979878	chr12:4757474-4757475	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs186095571	chr12:4757505-4757506	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
3	rs571239183	chr12:4757546-4757547	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
4	rs533851559	chr12:4757626-4757627	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
5	rs553932053	chr12:4757738-4757739	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
6	rs190814477	chr12:4757742-4757743	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
7	rs144668835	chr12:4757745-4757746	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
8	rs556885867	chr12:4757758-4757759	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
9	rs371081955	chr12:4757793-4757794	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
10	rs4147668	chr12:4757809-4757810	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs4147698	chr12:4757818-4757819	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
12	rs113074341	chr12:4757821-4757822	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
13	rs73041574	chr12:4757827-4757828	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs4147669	chr12:4757840-4757841	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
15	rs2072354	chr12:4757841-4757842	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs979877	chr12:4757896-4757897	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs570431929	chr12:4757901-4757902	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
18	rs541095991	chr12:4757916-4757917	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
19	rs561058046	chr12:4757933-4757934	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
20	rs370945247	chr12:4757944-4757945	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
21	rs79542732	chr12:4757975-4757976	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
22	rs182995836	chr12:4758107-4758108	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
23	rs569038203	chr12:4758119-4758120	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
24	rs189188506	chr12:4758142-4758143	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
25	rs539122960	chr12:4758157-4758158	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
26	rs551402656	chr12:4758185-4758186	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
27	rs714621	chr12:4758188-4758189	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs542796416	chr12:4758210-4758211	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
29	rs533752581	chr12:4758213-4758214	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
30	rs553862383	chr12:4758228-4758229	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs567408265	chr12:4758273-4758274	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs536250195	chr12:4758276-4758277	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs201653293	chr12:4758299-4758300	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs35155742	chr12:4758305-4758306	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs201207027	chr12:4758328-4758329	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs369755799	chr12:4758357-4758358	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs373984591	chr12:4758365-4758366	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs191888523	chr12:4758431-4758432	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs75369454	chr12:4758436-4758437	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs572561782	chr12:4758458-4758459	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs576278048	chr12:4758476-4758477	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs541269757	chr12:4758510-4758511	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs11831461	chr12:4758535-4758536	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs368106104	chr12:4758556-4758557	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs574623567	chr12:4758560-4758561	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs367906308	chr12:4758588-4758589	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs535623552	chr12:4758623-4758624	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs543397161	chr12:4758654-4758655	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs2270134	chr12:4758788-4758789	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs532424490	chr12:4758805-4758806	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Ovarian cancer	20844748	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164919	CNVD
lymphocytic leukemia	21291569	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Epilepsy	21858020	CNVD
Colorectal cancer	19359472	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:783 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:4756400-4757600	Enhancers	Sigmoid Colon	Sigmoid Colon
2	chr12:4756800-4757800	Flanking Active TSS	GM12878-XiMat	blood
3	chr12:4757000-4757600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr12:4757000-4757600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
5	chr12:4757000-4757600	Flanking Active TSS	Brain Angular Gyrus	brain
6	chr12:4757000-4757600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
7	chr12:4757000-4757600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
8	chr12:4757000-4757600	Enhancers	Small Intestine	intestine
9	chr12:4757000-4757600	Flanking Active TSS	NHEK	skin
10	chr12:4757000-4757800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr12:4757000-4757800	Flanking Active TSS	Dnd41	blood
12	chr12:4757000-4758000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr12:4757000-4758400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr12:4757000-4758800	Active TSS	Colonic Mucosa	Colon
15	chr12:4757000-4759200	Active TSS	iPS-18 Cell Line	embryonic stem cell
16	chr12:4757200-4757600	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr12:4757200-4757600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
18	chr12:4757200-4757600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
19	chr12:4757200-4757600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
20	chr12:4757200-4757600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr12:4757200-4757600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr12:4757200-4757600	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr12:4757200-4757600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
24	chr12:4757200-4757600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr12:4757200-4757600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
26	chr12:4757200-4757600	Flanking Active TSS	Fetal Brain Female	brain
27	chr12:4757200-4757600	Flanking Active TSS	Fetal Kidney	kidney
28	chr12:4757200-4757600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
29	chr12:4757200-4757600	Flanking Active TSS	Rectal Smooth Muscle	rectum
30	chr12:4757200-4757600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
31	chr12:4757200-4757600	Flanking Active TSS	Hela-S3	cervix
32	chr12:4757200-4757600	Flanking Active TSS	HepG2	liver
33	chr12:4757200-4757600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
34	chr12:4757200-4757800	Flanking Active TSS	Primary T cells from cord blood	blood
35	chr12:4757200-4757800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
36	chr12:4757200-4757800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
37	chr12:4757200-4757800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
38	chr12:4757200-4757800	Flanking Active TSS	Brain Anterior Caudate	brain
39	chr12:4757200-4757800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
40	chr12:4757200-4757800	Flanking Active TSS	Colon Smooth Muscle	Colon
41	chr12:4757200-4757800	Flanking Active TSS	HUVEC	blood vessel
42	chr12:4757200-4758000	Flanking Active TSS	Primary hematopoietic stem cells	blood
43	chr12:4757200-4758000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
44	chr12:4757200-4758200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr12:4757200-4758800	Active TSS	Brain Hippocampus Middle	brain
46	chr12:4757200-4758800	Active TSS	Fetal Stomach	stomach
47	chr12:4757200-4758800	Active TSS	Stomach Smooth Muscle	stomach
48	chr12:4757200-4759000	Active TSS	NHLF	lung
49	chr12:4757200-4759200	Active TSS	ES-I3 Cell Line	embryonic stem cell
50	chr12:4757200-4759200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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