Variant report

Variant nsv898772
Chromosome Location chr12:10622047-10722585
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:242 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:10607600-10625400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:10621200-10622400 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr12:10631200-10631600 Bivalent Enhancer Primary T cells fromperipheralblood blood
4 chr12:10631400-10631600 ZNF genes & repeats Thymus Thymus
5 chr12:10631600-10631800 Enhancers Thymus Thymus
6 chr12:10633000-10635600 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr12:10633800-10635000 Enhancers Primary T cells from cord blood blood
8 chr12:10633800-10635400 Enhancers Primary T cells fromperipheralblood blood
9 chr12:10633800-10635400 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr12:10634000-10635400 Enhancers Primary B cells from peripheral blood blood
11 chr12:10634000-10635400 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr12:10634800-10635400 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr12:10646400-10646600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr12:10646400-10646800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr12:10649800-10651600 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr12:10650200-10650400 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr12:10650200-10651800 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr12:10650400-10650800 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr12:10650400-10651000 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr12:10650600-10652000 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr12:10651000-10651800 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr12:10651600-10652000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
23 chr12:10651600-10652200 Enhancers GM12878-XiMat blood
24 chr12:10651800-10652000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr12:10652000-10652200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr12:10652000-10652400 Active TSS Primary Natural Killer cells fromperipheralblood blood
27 chr12:10652000-10652400 Active TSS Primary T killer naive cells fromperipheralblood blood
28 chr12:10652400-10656800 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr12:10652800-10654200 Enhancers Hela-S3 cervix
30 chr12:10653800-10654200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:10653800-10654200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr12:10655600-10656000 Enhancers Brain Hippocampus Middle brain
33 chr12:10656000-10656400 Flanking Active TSS Brain Hippocampus Middle brain
34 chr12:10663200-10663400 Bivalent/Poised TSS Primary T helper memory cells from peripheral blood 1 blood
35 chr12:10663600-10665200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr12:10664400-10664800 Active TSS Brain Hippocampus Middle brain
37 chr12:10664600-10665000 Active TSS Brain Anterior Caudate brain
38 chr12:10664600-10665200 Enhancers Brain Substantia Nigra brain
39 chr12:10664800-10665000 Flanking Active TSS Brain Hippocampus Middle brain
40 chr12:10665000-10666200 Enhancers Brain Hippocampus Middle brain
41 chr12:10665200-10665600 Enhancers Hela-S3 cervix
42 chr12:10674000-10674600 Enhancers GM12878-XiMat blood
43 chr12:10678000-10680800 Weak transcription Fetal Intestine Small intestine
44 chr12:10680200-10681000 Enhancers Fetal Intestine Large intestine
45 chr12:10680600-10680800 Enhancers Rectal Mucosa Donor 31 rectum
46 chr12:10680800-10681200 Active TSS Duodenum Mucosa Duodenum
47 chr12:10680800-10681200 Enhancers Fetal Intestine Small intestine
48 chr12:10680800-10681200 Active TSS Rectal Mucosa Donor 29 rectum
49 chr12:10680800-10681200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
50 chr12:10680800-10681200 Enhancers Sigmoid Colon Sigmoid Colon

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