Variant report

Variant	nsv898775
Chromosome Location	chr12:10668694-10735786
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:603)
CpG islands
(count:183)
Chromatin interactive
region (count:16)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:603 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr12:10695883-10696624	GM12878	blood:	n/a	n/a
2	ATF2	chr12:10693081-10694102	GM12878	blood:	n/a	n/a
3	ATF2	chr12:10709784-10711202	GM12878	blood:	n/a	n/a
4	ATF2	chr12:10710819-10711219	GM12878	blood:	n/a	n/a
5	ATF2	chr12:10709941-10710817	GM12878	blood:	n/a	n/a
6	ATF2	chr12:10693152-10694036	GM12878	blood:	n/a	n/a
7	ATF2	chr12:10695894-10696491	GM12878	blood:	n/a	n/a
8	BATF	chr12:10710979-10711269	GM12878	blood:	n/a	chr12:10711145-10711156
9	BATF	chr12:10693300-10693868	GM12878	blood:	n/a	chr12:10693650-10693661
10	BATF	chr12:10710332-10710715	GM12878	blood:	n/a	n/a
11	BATF	chr12:10693317-10693939	GM12878	blood:	n/a	chr12:10693650-10693661
12	BATF	chr12:10696061-10696446	GM12878	blood:	n/a	n/a
13	BATF	chr12:10696036-10696487	GM12878	blood:	n/a	n/a
14	BCL11A	chr12:10696199-10696390	GM12878	blood:	n/a	n/a
15	BCL11A	chr12:10710317-10710684	GM12878	blood:	n/a	n/a
16	BCL11A	chr12:10696076-10696426	GM12878	blood:	n/a	n/a
17	BCL11A	chr12:10693310-10693858	GM12878	blood:	n/a	n/a
18	BCL11A	chr12:10671811-10671985	GM12878	blood:	n/a	n/a
19	BCL11A	chr12:10693354-10693625	GM12878	blood:	n/a	n/a
20	BCL3	chr12:10695995-10696628	GM12878	blood:	n/a	n/a
21	BCL3	chr12:10711751-10712163	GM12878	blood:	n/a	chr12:10711876-10711885
22	BCL3	chr12:10710259-10710760	GM12878	blood:	n/a	chr12:10710710-10710719
23	BCL3	chr12:10696031-10696586	GM12878	blood:	n/a	n/a
24	BCL3	chr12:10693360-10693849	GM12878	blood:	n/a	n/a
25	BCL3	chr12:10693210-10693959	GM12878	blood:	n/a	n/a
26	BCLAF1	chr12:10693217-10694044	GM12878	blood:	n/a	n/a
27	BCLAF1	chr12:10709854-10710814	GM12878	blood:	n/a	chr12:10710710-10710719
28	BCLAF1	chr12:10693241-10693808	GM12878	blood:	n/a	n/a
29	BCLAF1	chr12:10696071-10696445	GM12878	blood:	n/a	n/a
30	BCLAF1	chr12:10706665-10707710	GM12878	blood:	n/a	n/a
31	BCLAF1	chr12:10714764-10715278	GM12878	blood:	n/a	chr12:10715136-10715145
32	BCLAF1	chr12:10707757-10708159	GM12878	blood:	n/a	n/a
33	BHLHE40	chr12:10693305-10693679	GM12878	blood:	n/a	n/a
34	BHLHE40	chr12:10710383-10710761	GM12878	blood:	n/a	n/a
35	BRCA1	chr12:10676248-10676302	GM12878	blood:	n/a	n/a
36	BRCA1	chr12:10710053-10710128	GM12878	blood:	n/a	n/a
37	BRCA1	chr12:10724938-10725149	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr12:10693180-10693997	GM12878	blood:	n/a	n/a
39	CEBPB	chr12:10716337-10716441	HepG2	liver:	n/a	n/a
40	CEBPB	chr12:10724840-10725197	A549	lung:	n/a	n/a
41	CEBPB	chr12:10675319-10675536	HepG2	liver:	n/a	chr12:10675436-10675447
42	CEBPB	chr12:10706586-10708245	GM12878	blood:	n/a	n/a
43	CEBPB	chr12:10724795-10725120	A549	lung:	n/a	n/a
44	CEBPB	chr12:10724868-10725172	HepG2	liver:	n/a	n/a
45	CEBPB	chr12:10675342-10675509	A549	lung:	n/a	chr12:10675436-10675447
46	CEBPB	chr12:10695688-10696520	GM12878	blood:	n/a	n/a
47	CEBPB	chr12:10724797-10725215	A549	lung:	n/a	n/a
48	CEBPB	chr12:10724831-10725208	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr12:10724854-10725194	IMR90	lung:	n/a	n/a
50	CEBPB	chr12:10709894-10710828	GM12878	blood:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:10704009-10704059	RPTEC	kidney:	n/a
2	chr12:10704009-10704059	BJ	skin:	n/a
3	chr12:10704009-10704059	HAEpiC	amniotic membrane:	n/a
4	chr12:10704074-10704124	HMEC	breast:	n/a
5	chr12:10704074-10704124	HRE	kidney:	n/a
6	chr12:10704074-10704124	HL-60	blood:	n/a
7	chr12:10704074-10704124	MCF-7	breast:	n/a
8	chr12:10704318-10704368	Hepatocyte	liver:	n/a
9	chr12:10704074-10704124	HCF	heart:	n/a
10	chr12:10704318-10704368	PFSK-1	brain:	n/a
11	chr12:10704318-10704368	GM19239	blood:	n/a
12	chr12:10704318-10704368	AG04449	skin:	fetal
13	chr12:10704074-10704124	Hela-S3	cervix:	n/a
14	chr12:10704009-10704059	GM12878	blood:	n/a
15	chr12:10704009-10704059	HRPEpiC	eye:	n/a
16	chr12:10704318-10704368	PrEC	prostate:	n/a
17	chr12:10704318-10704368	ovcar-3	ovarian:	n/a
18	chr12:10704318-10704368	NH-A	brain:	n/a
19	chr12:10704318-10704368	CMK	blood:	n/a
20	chr12:10704074-10704124	HRCEpiC	kidney:	n/a
21	chr12:10704009-10704059	Hepatocyte	liver:	n/a
22	chr12:10704009-10704059	HMEC	breast:	n/a
23	chr12:10704318-10704368	H1-hESC	embryonic stem cell:	embryo
24	chr12:10704074-10704124	K562	blood:	n/a
25	chr12:10704009-10704059	AoSMC	blood vessel:	n/a
26	chr12:10704009-10704059	U87	brain:	n/a
27	chr12:10704074-10704124	AoSMC	blood vessel:	n/a
28	chr12:10704074-10704124	ECC-1	luminal epithelium:	n/a
29	chr12:10704074-10704124	Hepatocyte	liver:	n/a
30	chr12:10704009-10704059	HNPCEpiC	eye:	n/a
31	chr12:10704009-10704059	HCF	heart:	n/a
32	chr12:10704074-10704124	Caco-2	colon:	n/a
33	chr12:10704074-10704124	HCT-116	colon:	n/a
34	chr12:10704009-10704059	PFSK-1	brain:	n/a
35	chr12:10704009-10704059	HL-60	blood:	n/a
36	chr12:10704009-10704059	Hela-S3	cervix:	n/a
37	chr12:10704318-10704368	HCF	heart:	n/a
38	chr12:10704009-10704059	T-47D	breast:	n/a
39	chr12:10704318-10704368	NHDF-neo	bronchial:	n/a
40	chr12:10704318-10704368	MCF10A-Er-Src	breast:	n/a
41	chr12:10704009-10704059	SKMC	muscle:	n/a
42	chr12:10704074-10704124	AG09319	gingival:	n/a
43	chr12:10704074-10704124	GM12892	blood:	n/a
44	chr12:10704318-10704368	HPAEpiC	pulmonary alveolar:	n/a
45	chr12:10704009-10704059	AG09319	gingival:	n/a
46	chr12:10704074-10704124	HPAEpiC	pulmonary alveolar:	n/a
47	chr12:10704074-10704124	NHDF-neo	bronchial:	n/a
48	chr12:10704318-10704368	K562	blood:	n/a
49	chr12:10704318-10704368	SK-N-MC	brain:	n/a
50	chr12:10704009-10704059	LNCaP	prostate:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:10483978..10484906-chr12:10714545..10715159,3	MCF-7	breast:
2	chr12:10693047..10695502-chr12:10698886..10701191,2	K562	blood:
3	chr12:10484283..10485072-chr12:10714510..10715568,4	K562	blood:
4	chr12:10388060..10389289-chr12:10714524..10715522,5	MCF-7	breast:
5	chr12:10722202..10724547-chr12:10764643..10766915,2	K562	blood:
6	chr1:2165020..2165613-chr12:10723245..10724037,2	Hela-S3	cervix:
7	chr12:10713530..10716257-chr12:10762530..10764410,2	MCF-7	breast:
8	chr12:10305944..10306449-chr12:10714647..10715601,2	MCF-7	breast:
9	chr12:10693047..10695502-chr12:10698886..10701191,2	K562	blood:
10	chr12:10388138..10389062-chr12:10714617..10715220,3	K562	blood:
11	chr12:10714679..10715464-chr12:10826841..10827362,2	MCF-7	breast:
12	chr12:10484385..10484963-chr12:10714626..10715246,2	MCF-7	breast:
13	chr12:10389063..10390009-chr12:10714674..10715483,2	K562	blood:
14	chr12:10714739..10715346-chr12:10902495..10903116,2	K562	blood:
15	chr12:10484044..10484911-chr12:10711156..10712037,3	MCF-7	breast:
16	chr12:10392959..10394973-chr12:10709982..10712933,2	MCF-7	breast:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EIF2S3L.1-2	chr12:10727423-10727581	XLOC_009662
2	lnc-EIF2S3L.1-1	chr12:10705975-10706120	NONHSAT026886
3	lnc-EIF2S3L.1-2	chr12:10725617-10725820	XLOC_009662
4	lnc-EIF2S3L.1-1	chr12:10705962-10706115	ENSG00000256039
5	lnc-EIF2S3L.1-1	chr12:10706698-10706732	NONHSAT026886
6	lnc-EIF2S3L.1-2	chr12:10727422-10727437	FPKM1_group_5768_transcript_1
7	lnc-EIF2S3L.1-1	chr12:10705979-10706115	XLOC_009661
8	lnc-EIF2S3L.1-2	chr12:10725616-10725820	NONHSAT026888
9	lnc-EIF2S3L.1-2	chr12:10725616-10725820	FPKM1_group_5768_transcript_1
10	lnc-MAGOHB-2	chr12:10703865-10704134	NONHSAT026885
11	lnc-EIF2S3L.1-4	chr12:10703809-10704403	NONHSAT026884
12	lnc-EIF2S3L.1-2	chr12:10727422-10727581	NONHSAT026888
13	lnc-EIF2S3L.1-1	chr12:10709935-10710648	ENSG00000256039
14	lnc-EIF2S3L.1-1	chr12:10709642-10712295	NONHSAT026886
15	lnc-EIF2S3L.1-5	chr12:10717846-10718105	predAs_ge08_STYK1_1
16	lnc-EIF2S3L.1-1	chr12:10709935-10710816	XLOC_009661

No data

Variant related genes	Relation type
ENSG00000256039	TF binding region
SLC25A39P2	TF binding region
ENSG00000256039	CpG island
SLC25A39P2	CpG island
ENSG00000111196	chromatin interactions
ENSG00000060140	chromatin interactions
ENSG00000256888	chromatin interactions
E2F5	miRNA target sites
PHKA1	miRNA target sites
RBM12B	miRNA target sites
MAP7	miRNA target sites
DDX5	miRNA target sites
CMTM4	miRNA target sites

Extended variants
information (count: 2281 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:2281 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376907952	chr12:10674003-10674004	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs73070549	chr12:10674011-10674012	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs550947580	chr12:10674023-10674024	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs186767627	chr12:10674056-10674057	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs374093383	chr12:10674064-10674065	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs191235092	chr12:10674086-10674087	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs76513351	chr12:10674090-10674091	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs566961511	chr12:10674095-10674096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs73070550	chr12:10674132-10674133	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs542687947	chr12:10674143-10674144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs556114685	chr12:10674144-10674145	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs59466049	chr12:10674274-10674275	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs538275110	chr12:10674275-10674276	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs185728867	chr12:10674322-10674323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs73070554	chr12:10674354-10674355	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs143426812	chr12:10674370-10674371	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs551158353	chr12:10674389-10674390	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs147983833	chr12:10674395-10674396	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs113339812	chr12:10674440-10674441	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs190445843	chr12:10674466-10674467	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs143473201	chr12:10674516-10674517	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs192920704	chr12:10674533-10674534	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs185140227	chr12:10674545-10674546	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs530122743	chr12:10674550-10674551	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs188757948	chr12:10674577-10674578	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs544653171	chr12:10674600-10674601	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs150697674	chr12:10678003-10678004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs560530741	chr12:10678013-10678014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs11053839	chr12:10678038-10678039	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs566386958	chr12:10678067-10678068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs143344823	chr12:10678113-10678114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs572152585	chr12:10678114-10678115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs574643813	chr12:10678141-10678142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs145898022	chr12:10678156-10678157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373790888	chr12:10678157-10678158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs73264198	chr12:10678170-10678171	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs563613427	chr12:10678182-10678183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs577198933	chr12:10678194-10678195	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs370915804	chr12:10678195-10678196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200337370	chr12:10678202-10678203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs66963926	chr12:10678207-10678208	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs71051505	chr12:10678208-10678209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs545864126	chr12:10678210-10678211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs559840565	chr12:10678211-10678212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs528575117	chr12:10678212-10678213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs538725004	chr12:10678214-10678215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs28706116	chr12:10678216-10678217	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs558375196	chr12:10678218-10678219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs561875446	chr12:10678230-10678231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs28537389	chr12:10678232-10678233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung adenocarcinoma	21935476	CNVD

Chromatin state (count:444 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10674000-10674600	Enhancers	GM12878-XiMat	blood
2	chr12:10678000-10680800	Weak transcription	Fetal Intestine Small	intestine
3	chr12:10680200-10681000	Enhancers	Fetal Intestine Large	intestine
4	chr12:10680600-10680800	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr12:10680800-10681200	Active TSS	Duodenum Mucosa	Duodenum
6	chr12:10680800-10681200	Enhancers	Fetal Intestine Small	intestine
7	chr12:10680800-10681200	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr12:10680800-10681200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
9	chr12:10680800-10681200	Enhancers	Sigmoid Colon	Sigmoid Colon
10	chr12:10681000-10681800	Weak transcription	Fetal Intestine Large	intestine
11	chr12:10681200-10681400	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr12:10681200-10681400	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr12:10681200-10682200	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr12:10681400-10681800	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr12:10681400-10682000	Enhancers	Rectal Mucosa Donor 29	rectum
16	chr12:10681800-10682600	Enhancers	Rectal Mucosa Donor 31	rectum
17	chr12:10681800-10682800	Enhancers	Fetal Intestine Large	intestine
18	chr12:10682000-10682200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr12:10682000-10682400	Active TSS	Rectal Mucosa Donor 29	rectum
20	chr12:10682400-10682600	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr12:10682400-10682800	Enhancers	Rectal Mucosa Donor 29	rectum
22	chr12:10682400-10683600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
23	chr12:10683600-10684000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
24	chr12:10684000-10684400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
25	chr12:10684400-10684600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr12:10691000-10691800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr12:10691800-10693000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr12:10692800-10694200	Enhancers	Muscle Satellite Cultured Cells	--
29	chr12:10692800-10694600	Enhancers	GM12878-XiMat	blood
30	chr12:10693000-10694000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
31	chr12:10693000-10694200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr12:10693000-10694600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr12:10693000-10695000	Enhancers	NHDF-Ad	bronchial
34	chr12:10693200-10694000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr12:10693200-10694000	Enhancers	Primary hematopoietic stem cells short term culture	blood
36	chr12:10693200-10694000	Enhancers	Dnd41	blood
37	chr12:10693200-10694000	Enhancers	HMEC	breast
38	chr12:10693200-10694000	Enhancers	NHEK	skin
39	chr12:10693200-10694200	Enhancers	Osteobl	bone
40	chr12:10693400-10694000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr12:10693400-10694000	Enhancers	HSMM	muscle
42	chr12:10693600-10694000	Enhancers	Thymus	Thymus
43	chr12:10694000-10696200	Weak transcription	Thymus	Thymus
44	chr12:10694000-10697000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr12:10695800-10696200	ZNF genes & repeats	GM12878-XiMat	blood
46	chr12:10696200-10697200	Enhancers	Thymus	Thymus
47	chr12:10697000-10697400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
48	chr12:10697400-10699000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
49	chr12:10699000-10699600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr12:10699200-10700600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links