No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs2900554 |
chr12:11134701-11134702 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs141053822 |
chr12:11134906-11134907 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs553477576 |
chr12:11134910-11134911 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs190220923 |
chr12:11134920-11134921 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs531725343 |
chr12:11134923-11134924 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs551313644 |
chr12:11134938-11134939 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs571315424 |
chr12:11134973-11134974 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs116290704 |
chr12:11135067-11135068 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs547310445 |
chr12:11135069-11135070 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs115245620 |
chr12:11135149-11135150 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs536091992 |
chr12:11135166-11135167 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs183356998 |
chr12:11135211-11135212 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs576103932 |
chr12:11135221-11135222 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs538743019 |
chr12:11135229-11135230 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs187848042 |
chr12:11135232-11135233 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs201182127 |
chr12:11135270-11135271 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs113978113 |
chr12:11135285-11135286 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs540902362 |
chr12:11135359-11135360 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs191039600 |
chr12:11135399-11135400 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs574165495 |
chr12:11135404-11135405 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs537696282 |
chr12:11135415-11135416 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs199737671 |
chr12:11135445-11135446 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs542810159 |
chr12:11135457-11135458 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs563096053 |
chr12:11135458-11135459 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs4763603 |
chr12:11135476-11135477 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs551446762 |
chr12:11135576-11135577 |
Weak transcription Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs182560318 |
chr12:11135611-11135612 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs527652218 |
chr12:11135630-11135631 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs78400021 |
chr12:11135654-11135655 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs567407373 |
chr12:11135700-11135701 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs74589771 |
chr12:11135721-11135722 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs543352413 |
chr12:11135726-11135727 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs552661878 |
chr12:11135729-11135730 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs566492827 |
chr12:11135771-11135772 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs569822610 |
chr12:11135781-11135782 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs563251655 |
chr12:11135815-11135816 |
Weak transcription Enhancers Strong transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs147882003 |
chr12:11135842-11135843 |
Weak transcription Enhancers Strong transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs558661130 |
chr12:11135922-11135923 |
Weak transcription Enhancers Strong transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs572090554 |
chr12:11135934-11135935 |
Weak transcription Enhancers Strong transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs367987842 |
chr12:11135976-11135977 |
Weak transcription Enhancers Strong transcription Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs74062413 |
chr12:11136010-11136011 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs140472738 |
chr12:11136020-11136021 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs374119025 |
chr12:11136050-11136051 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs574302026 |
chr12:11136113-11136114 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs543299516 |
chr12:11136117-11136118 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs573253483 |
chr12:11136178-11136179 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs150432174 |
chr12:11136191-11136192 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs545121737 |
chr12:11136210-11136211 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs188049485 |
chr12:11136212-11136213 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs4430593 |
chr12:11136251-11136252 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|