No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs7307031 |
chr12:11144994-11144995 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs577253262 |
chr12:11145000-11145001 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs73051617 |
chr12:11145002-11145003 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs200531568 |
chr12:11145004-11145005 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs375116799 |
chr12:11145012-11145013 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs202176700 |
chr12:11145013-11145014 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs372904129 |
chr12:11145038-11145039 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs115320511 |
chr12:11145067-11145068 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs34946638 |
chr12:11145068-11145069 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs541925347 |
chr12:11145089-11145090 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs561406591 |
chr12:11145103-11145104 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs530427520 |
chr12:11145113-11145114 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs146475047 |
chr12:11145121-11145122 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs183811909 |
chr12:11145125-11145126 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs4132154 |
chr12:11145191-11145192 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
16 |
rs369026631 |
chr12:11145197-11145198 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs10845274 |
chr12:11145232-11145233 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs117382710 |
chr12:11145249-11145250 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs10845275 |
chr12:11145309-11145310 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs568618323 |
chr12:11145338-11145339 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs10845276 |
chr12:11145463-11145464 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
22 |
rs557428297 |
chr12:11145468-11145469 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs141003860 |
chr12:11145477-11145478 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs539743037 |
chr12:11145482-11145483 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs113591142 |
chr12:11145486-11145487 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs188299611 |
chr12:11145496-11145497 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs374226042 |
chr12:11145515-11145516 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs573003827 |
chr12:11145516-11145517 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs10845277 |
chr12:11145518-11145519 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
30 |
rs555139066 |
chr12:11145582-11145583 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs10772404 |
chr12:11145649-11145650 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
32 |
rs151217836 |
chr12:11145697-11145698 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs563764721 |
chr12:11145701-11145702 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs577535716 |
chr12:11145736-11145737 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs370880579 |
chr12:11145764-11145765 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs546489911 |
chr12:11145810-11145811 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs10772405 |
chr12:11145826-11145827 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs10772406 |
chr12:11145827-11145828 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs193054793 |
chr12:11145836-11145837 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs531058579 |
chr12:11145858-11145859 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs140401518 |
chr12:11145881-11145882 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs376867657 |
chr12:11145896-11145897 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs386760331 |
chr12:11145906-11145907 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs12314020 |
chr12:11145907-11145908 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs7310233 |
chr12:11145923-11145924 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
46 |
rs373113218 |
chr12:11145966-11145967 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs536280228 |
chr12:11146003-11146004 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs375962049 |
chr12:11146010-11146011 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs186866023 |
chr12:11146026-11146027 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs568139452 |
chr12:11146088-11146089 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|