Variant report
Variant | nsv898872 |
---|---|
Chromosome Location | chr12:21000586-21413632 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1402)
- CpG islands (count:305)
- Chromatin interactive region (count:30)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr12:21392742-21392928 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr12:21387015-21387268 | K562 | blood: | n/a | n/a |
3 | BACH1 | chr12:21322799-21322999 | K562 | blood: | n/a | n/a |
4 | BACH1 | chr12:21350777-21350898 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | BACH1 | chr12:21380331-21380521 | K562 | blood: | n/a | n/a |
6 | BATF | chr12:21021928-21022137 | GM12878 | blood: | n/a | chr12:21022019-21022030 |
7 | BATF | chr12:21090344-21090547 | GM12878 | blood: | n/a | n/a |
8 | BHLHE40 | chr12:21017099-21017177 | GM12878 | blood: | n/a | n/a |
9 | BHLHE40 | chr12:21138511-21138625 | GM12878 | blood: | n/a | n/a |
10 | BRCA1 | chr12:21322801-21323167 | Hela-S3 | cervix: | n/a | n/a |
11 | BRCA1 | chr12:21103222-21103500 | Hela-S3 | cervix: | n/a | n/a |
12 | BRCA1 | chr12:21308670-21308879 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | CEBPB | chr12:21243014-21243312 | A549 | lung: | n/a | chr12:21243166-21243177 |
14 | CEBPB | chr12:21243036-21243304 | IMR90 | lung: | n/a | chr12:21243166-21243177 |
15 | CEBPB | chr12:21036286-21036659 | A549 | lung: | n/a | chr12:21036463-21036474 chr12:21036307-21036318 |
16 | CEBPB | chr12:21038060-21038439 | A549 | lung: | n/a | n/a |
17 | CEBPB | chr12:21036323-21036549 | HepG2 | liver: | n/a | chr12:21036463-21036474 |
18 | CEBPB | chr12:21409453-21409717 | HepG2 | liver: | n/a | chr12:21409600-21409611 |
19 | CEBPB | chr12:21271000-21271136 | HepG2 | liver: | n/a | chr12:21271080-21271091 |
20 | CEBPB | chr12:21071557-21071721 | A549 | lung: | n/a | n/a |
21 | CEBPB | chr12:21056070-21056238 | HepG2 | liver: | n/a | n/a |
22 | CEBPB | chr12:21356519-21356864 | IMR90 | lung: | n/a | chr12:21356695-21356706 |
23 | CEBPB | chr12:21193602-21193866 | HepG2 | liver: | n/a | chr12:21193754-21193765 |
24 | CEBPB | chr12:21260031-21260260 | IMR90 | lung: | n/a | chr12:21260128-21260137 chr12:21260126-21260137 chr12:21260126-21260139 |
25 | CEBPB | chr12:21234037-21234356 | A549 | lung: | n/a | chr12:21234179-21234190 |
26 | CEBPB | chr12:21038089-21038427 | A549 | lung: | n/a | n/a |
27 | CEBPB | chr12:21410877-21411098 | A549 | lung: | n/a | n/a |
28 | CEBPB | chr12:21356602-21356832 | H1-hESC | embryonic stem cell: | n/a | chr12:21356695-21356706 |
29 | CEBPB | chr12:21243024-21243307 | HepG2 | liver: | n/a | chr12:21243166-21243177 |
30 | CEBPB | chr12:21175943-21176096 | H1-hESC | embryonic stem cell: | n/a | chr12:21176036-21176047 chr12:21176037-21176048 chr12:21176036-21176049 chr12:21176038-21176047 |
31 | CEBPB | chr12:21133477-21133530 | HepG2 | liver: | n/a | n/a |
32 | CEBPB | chr12:21297827-21298053 | Hela-S3 | cervix: | n/a | n/a |
33 | CEBPB | chr12:21036282-21036646 | Hela-S3 | cervix: | n/a | chr12:21036463-21036474 chr12:21036307-21036318 |
34 | CEBPB | chr12:21037942-21038507 | A549 | lung: | n/a | n/a |
35 | CEBPB | chr12:21233354-21233510 | A549 | lung: | n/a | n/a |
36 | CEBPB | chr12:21036155-21036832 | A549 | lung: | n/a | chr12:21036463-21036474 chr12:21036307-21036318 |
37 | CEBPB | chr12:21114301-21114316 | A549 | lung: | n/a | n/a |
38 | CEBPB | chr12:21358486-21358919 | A549 | lung: | n/a | n/a |
39 | CEBPB | chr12:21356579-21356809 | HepG2 | liver: | n/a | chr12:21356695-21356706 |
40 | CEBPB | chr12:21394755-21395080 | A549 | lung: | n/a | chr12:21394924-21394935 |
41 | CEBPB | chr12:21409557-21409626 | K562 | blood: | n/a | chr12:21409600-21409611 |
42 | CEBPB | chr12:21282343-21282678 | HepG2 | liver: | n/a | chr12:21282598-21282609 chr12:21282528-21282539 |
43 | CEBPB | chr12:21168771-21169100 | A549 | lung: | n/a | chr12:21168919-21168930 |
44 | CEBPB | chr12:21193579-21193868 | A549 | lung: | n/a | chr12:21193754-21193765 |
45 | CEBPB | chr12:21409481-21409705 | A549 | lung: | n/a | chr12:21409600-21409611 |
46 | CEBPB | chr12:21015510-21015751 | A549 | lung: | n/a | n/a |
47 | CEBPB | chr12:21246783-21246933 | HepG2 | liver: | n/a | chr12:21246828-21246839 |
48 | CEBPB | chr12:21193722-21193901 | H1-hESC | embryonic stem cell: | n/a | chr12:21193754-21193765 |
49 | CEBPB | chr12:21215636-21215960 | A549 | lung: | n/a | n/a |
50 | CEBPB | chr12:21234048-21234229 | H1-hESC | embryonic stem cell: | n/a | chr12:21234179-21234190 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:21283725-21283775 | GM12892 | blood: | n/a |
2 | chr12:21014317-21014367 | MCF-7 | breast: | n/a |
3 | chr12:21287375-21287425 | ECC-1 | luminal epithelium: | n/a |
4 | chr12:21287375-21287425 | Hepatocyte | liver: | n/a |
5 | chr12:21287375-21287425 | SKMC | muscle: | n/a |
6 | chr12:21287375-21287425 | BE2_C | brain: | n/a |
7 | chr12:21283725-21283775 | AG04449 | skin: | fetal |
8 | chr12:21015340-21015390 | NHBE | bronchial: | n/a |
9 | chr12:21014317-21014367 | GM12891 | blood: | n/a |
10 | chr12:21283725-21283775 | HAEpiC | amniotic membrane: | n/a |
11 | chr12:21324585-21324635 | HepG2 | liver: | n/a |
12 | chr12:21283725-21283775 | HMEC | breast: | n/a |
13 | chr12:21283725-21283775 | AG09309 | skin: | n/a |
14 | chr12:21015340-21015390 | Jurkat | blood: | n/a |
15 | chr12:21014317-21014367 | PrEC | prostate: | n/a |
16 | chr12:21015340-21015390 | AG10803 | skin: | n/a |
17 | chr12:21287375-21287425 | AG04449 | skin: | fetal |
18 | chr12:21014317-21014367 | T-47D | breast: | n/a |
19 | chr12:21324585-21324635 | HRCEpiC | kidney: | n/a |
20 | chr12:21014317-21014367 | HepG2 | liver: | n/a |
21 | chr12:21014317-21014367 | HNPCEpiC | eye: | n/a |
22 | chr12:21015340-21015390 | AG09309 | skin: | n/a |
23 | chr12:21287375-21287425 | SK-N-SH | brain: | n/a |
24 | chr12:21287375-21287425 | HUVEC | blood vessel: | n/a |
25 | chr12:21015340-21015390 | SKMC | muscle: | n/a |
26 | chr12:21324585-21324635 | SK-N-MC | brain: | n/a |
27 | chr12:21283725-21283775 | AG04450 | lung: | fetal |
28 | chr12:21014317-21014367 | NHDF-neo | bronchial: | n/a |
29 | chr12:21283725-21283775 | NHBE | bronchial: | n/a |
30 | chr12:21015340-21015390 | AoSMC | blood vessel: | n/a |
31 | chr12:21014317-21014367 | AoSMC | blood vessel: | n/a |
32 | chr12:21287375-21287425 | GM12878 | blood: | n/a |
33 | chr12:21283725-21283775 | PFSK-1 | brain: | n/a |
34 | chr12:21324585-21324635 | NH-A | brain: | n/a |
35 | chr12:21014317-21014367 | PFSK-1 | brain: | n/a |
36 | chr12:21324585-21324635 | Hela-S3 | cervix: | n/a |
37 | chr12:21015340-21015390 | U87 | brain: | n/a |
38 | chr12:21014317-21014367 | HIPEpiC | eye: | n/a |
39 | chr12:21287375-21287425 | A549 | lung: | n/a |
40 | chr12:21287375-21287425 | Hela-S3 | cervix: | n/a |
41 | chr12:21324585-21324635 | BJ | skin: | n/a |
42 | chr12:21287375-21287425 | Caco-2 | colon: | n/a |
43 | chr12:21014317-21014367 | AG09309 | skin: | n/a |
44 | chr12:21283725-21283775 | HL-60 | blood: | n/a |
45 | chr12:21287375-21287425 | IMR90 | lung: | fetal |
46 | chr12:21283725-21283775 | U87 | brain: | n/a |
47 | chr12:21015340-21015390 | SK-N-SH | brain: | n/a |
48 | chr12:21283725-21283775 | NH-A | brain: | n/a |
49 | chr12:21015340-21015390 | ovcar-3 | ovarian: | n/a |
50 | chr12:21015340-21015390 | AG04450 | lung: | fetal |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:21099420..21100309-chr12:21218592..21219170,2 | MCF-7 | breast: | |
2 | chr12:21099420..21100309-chr12:21218592..21219170,2 | MCF-7 | breast: | |
3 | chr12:21099378..21100255-chr12:21322524..21323110,2 | MCF-7 | breast: | |
4 | chr12:21102918..21103853-chr12:21322562..21323307,3 | MCF-7 | breast: | |
5 | chr12:21373190..21374871-chr12:21381396..21383038,2 | K562 | blood: | |
6 | chr12:21354085..21355966-chr12:21358587..21360653,2 | K562 | blood: | |
7 | chr12:21354085..21355966-chr12:21358587..21360653,2 | K562 | blood: | |
8 | chr12:21337800..21339752-chr12:21340612..21342590,2 | K562 | blood: | |
9 | chr12:21193958..21195458-chr17:59872939..59874521,2 | MCF-7 | breast: | |
10 | chr12:21254641..21256921-chr12:21258871..21260640,2 | K562 | blood: | |
11 | chr12:21220478..21221206-chr12:21228660..21229307,2 | MCF-7 | breast: | |
12 | chr12:21337800..21339752-chr12:21340612..21342590,2 | K562 | blood: | |
13 | chr12:21220478..21221206-chr12:21228660..21229307,2 | MCF-7 | breast: | |
14 | chr12:21099378..21100255-chr12:21322524..21323110,2 | MCF-7 | breast: | |
15 | chr12:21102918..21103853-chr12:21322562..21323307,3 | MCF-7 | breast: | |
16 | chr12:21254641..21256921-chr12:21258871..21260640,2 | K562 | blood: | |
17 | chr12:21103010..21104123-chr12:21218514..21219449,3 | MCF-7 | breast: | |
18 | chr12:21372629..21374270-chr12:21375812..21377730,2 | K562 | blood: | |
19 | chr12:21372629..21374270-chr12:21375812..21377730,2 | K562 | blood: | |
20 | chr12:21099355..21100332-chr12:21322634..21323175,3 | MCF-7 | breast: | |
21 | chr12:21268556..21269333-chr7:84915114..84915941,2 | MCF-7 | breast: | |
22 | chr12:21368652..21370975-chr12:21374890..21377722,2 | K562 | blood: | |
23 | chr12:21154478..21155199-chr12:21322720..21323314,2 | MCF-7 | breast: | |
24 | chr12:21099355..21100332-chr12:21322634..21323175,3 | MCF-7 | breast: | |
25 | chr12:21103010..21104123-chr12:21218514..21219449,3 | MCF-7 | breast: | |
26 | chr12:21154478..21155199-chr12:21322720..21323314,2 | MCF-7 | breast: | |
27 | chr12:21367379..21369612-chr12:21376922..21378821,2 | K562 | blood: | |
28 | chr12:21367379..21369612-chr12:21376922..21378821,2 | K562 | blood: | |
29 | chr12:21373190..21374871-chr12:21381396..21383038,2 | K562 | blood: | |
30 | chr12:21368652..21370975-chr12:21374890..21377722,2 | K562 | blood: |
(count:3 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-SLCO1B1-1 | chr12:21220285-21220317 | NONHSAT027240 |
2 | lnc-SLCO1A2-5 | chr12:21083248-21084757 | NONHSAT027238 |
3 | lnc-SLCO1B1-1 | chr12:21228194-21228718 | NONHSAT027240 |
No data |
No data |
Variant related genes | Relation type |
---|---|
SLCO1B3 | TF binding region |
ENSG00000257062 | TF binding region |
SLCO1B1 | TF binding region |
SLCO1B7 | TF binding region |
SLCO1B3 | CpG island |
ENSG00000257062 | CpG island |
SLCO1B1 | CpG island |
SLCO1B7 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs1304608 | chr12:21000586-21000587 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
2 | rs149425950 | chr12:21000632-21000633 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs35543005 | chr12:21000633-21000634 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs183651687 | chr12:21000637-21000638 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs150073509 | chr12:21000642-21000643 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs71043206 | chr12:21000648-21000649 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs547808739 | chr12:21000664-21000665 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs561342948 | chr12:21000667-21000668 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs528013197 | chr12:21000672-21000673 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs7137175 | chr12:21000731-21000732 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
11 | rs570960027 | chr12:21000806-21000807 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs6487155 | chr12:21000893-21000894 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
13 | rs556053437 | chr12:21000901-21000902 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs550311840 | chr12:21000938-21000939 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs570196780 | chr12:21000961-21000962 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs6487156 | chr12:21000974-21000975 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
17 | rs555846693 | chr12:21000985-21000986 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs190716531 | chr12:21001049-21001050 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs373099400 | chr12:21001064-21001065 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs397693709 | chr12:21001065-21001066 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs201202654 | chr12:21001066-21001067 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs533854576 | chr12:21001131-21001132 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs553990230 | chr12:21001132-21001133 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs576987876 | chr12:21001181-21001182 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs368598760 | chr12:21001184-21001185 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs372898078 | chr12:21001198-21001199 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs545949223 | chr12:21001209-21001210 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs75702242 | chr12:21001223-21001224 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs555915881 | chr12:21001226-21001227 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs575778189 | chr12:21001234-21001235 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs577023737 | chr12:21001239-21001240 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs140652639 | chr12:21001308-21001309 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs561353588 | chr12:21001353-21001354 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs76658007 | chr12:21001397-21001398 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs541381060 | chr12:21001476-21001477 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs564767360 | chr12:21001491-21001492 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs142794821 | chr12:21001519-21001520 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs77623573 | chr12:21001529-21001530 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs10770751 | chr12:21001546-21001547 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
40 | rs10770752 | chr12:21001563-21001564 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs10841671 | chr12:21001568-21001569 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
42 | rs565946093 | chr12:21001577-21001578 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs534990875 | chr12:21001603-21001604 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs151044164 | chr12:21001606-21001607 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs570760090 | chr12:21001663-21001664 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs539342206 | chr12:21001698-21001699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs536395365 | chr12:21001782-21001783 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs555977383 | chr12:21001787-21001788 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs139761047 | chr12:21001802-21001803 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs556587487 | chr12:21001811-21001812 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 17053054 | CNVD |
Malignant germ cell tumour | 17285132 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Melanoma | 18172304 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Wilms tumour | 21544195 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 16751803 | CNVD |
Testicular cancer | 18059402 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Seminomas | 18059402 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Lung cancer | 20668451 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Chronic lymphocytic leukemia | 21670202 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 21858162 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cancer | 20164919 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Breast cancer | 17133270 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Ependymoma | 18628472 | CNVD |
Leukemia | 18628472 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Breast cancer | 16397240 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Breast cancer | 21364760 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Breast cancer | 21509527 | CNVD |
Autism | 22102821 | CNVD |
Follicular lymphoma | 18703704 | CNVD |
Lung cancer | 18438408 | CNVD |
Melanoma | 17363583 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Schizophrenia | 23813976 | CNVD |
Schizophrenia | 21346763 | CNVD |
Breast cancer | 22522925 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Lung cancer | 21911935 | CNVD |
Breast cancer | 22048815 | CNVD |
Malignant peripheral nerve sheath tumor | 19844265 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Heart disease | 21282601 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Lung cancer | 17925434 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Gastric cancer | 24379144 | CNVD |
Gastric cancer | 19545448 | CNVD |
Lung cancer | 20031968 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung adenocarcinoma | 19826477 | CNVD |
Lung cancer | 19525976 | CNVD |
Lung cancer | 19826477 | CNVD |
Non-small cell lung cancer | 19451690 | CNVD |
Non-small cell lung cancer | 17504988 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Lung cancer | 19671679 | CNVD |
Non-syndromic sensorineural hearing loss | 21987784 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:20996000-21004800 | Weak transcription | Liver | Liver |
2 | chr12:21004800-21005000 | ZNF genes & repeats | Liver | Liver |
3 | chr12:21006200-21011000 | Weak transcription | Liver | Liver |
4 | chr12:21006600-21018000 | Weak transcription | A549 | lung |
5 | chr12:21007200-21007800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
6 | chr12:21007400-21007800 | Enhancers | H1 Cell Line | embryonic stem cell |
7 | chr12:21007400-21007800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
8 | chr12:21007400-21008200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
9 | chr12:21007600-21008000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
10 | chr12:21011000-21014600 | Strong transcription | Liver | Liver |
11 | chr12:21014600-21015400 | Weak transcription | Liver | Liver |
12 | chr12:21015400-21018400 | Strong transcription | Liver | Liver |
13 | chr12:21017800-21019200 | Enhancers | HUVEC | blood vessel |
14 | chr12:21018000-21018200 | Strong transcription | A549 | lung |
15 | chr12:21018200-21018800 | Weak transcription | A549 | lung |
16 | chr12:21018400-21020800 | Weak transcription | Liver | Liver |
17 | chr12:21018800-21020600 | Strong transcription | A549 | lung |
18 | chr12:21019800-21020000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
19 | chr12:21020000-21020400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
20 | chr12:21020000-21020600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
21 | chr12:21020600-21021600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
22 | chr12:21020600-21027400 | Weak transcription | A549 | lung |
23 | chr12:21020800-21021200 | Strong transcription | Liver | Liver |
24 | chr12:21020800-21021600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
25 | chr12:21021200-21024600 | Weak transcription | Liver | Liver |
26 | chr12:21021600-21022200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
27 | chr12:21024600-21026200 | Strong transcription | Liver | Liver |
28 | chr12:21026200-21027800 | Weak transcription | Liver | Liver |
29 | chr12:21027400-21028400 | Strong transcription | A549 | lung |
30 | chr12:21027800-21029600 | Strong transcription | Liver | Liver |
31 | chr12:21028400-21035800 | Weak transcription | A549 | lung |
32 | chr12:21029600-21032400 | Weak transcription | Liver | Liver |
33 | chr12:21032400-21035400 | Strong transcription | Liver | Liver |
34 | chr12:21034000-21034200 | Enhancers | Rectal Smooth Muscle | rectum |
35 | chr12:21034400-21035000 | Enhancers | Stomach Mucosa | stomach |
36 | chr12:21034400-21035600 | Weak transcription | Rectal Smooth Muscle | rectum |
37 | chr12:21035000-21035400 | Weak transcription | Stomach Mucosa | stomach |
38 | chr12:21035400-21036000 | Enhancers | Stomach Mucosa | stomach |
39 | chr12:21035400-21039000 | Weak transcription | Liver | Liver |
40 | chr12:21035600-21036200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
41 | chr12:21035600-21036600 | Enhancers | Rectal Smooth Muscle | rectum |
42 | chr12:21035600-21037800 | Enhancers | Colon Smooth Muscle | Colon |
43 | chr12:21035800-21036600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
44 | chr12:21035800-21037000 | Enhancers | Adipose Nuclei | Adipose |
45 | chr12:21035800-21037600 | Enhancers | HUVEC | blood vessel |
46 | chr12:21035800-21038200 | Enhancers | A549 | lung |
47 | chr12:21038200-21038400 | Flanking Active TSS | A549 | lung |
48 | chr12:21038400-21038800 | Enhancers | A549 | lung |
49 | chr12:21038800-21040600 | Weak transcription | A549 | lung |
50 | chr12:21039000-21040000 | Strong transcription | Liver | Liver |