Variant report

Variant	nsv898925
Chromosome Location	chr12:25367669-25398972
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:25394146-25394461	HepG2	liver:	n/a	chr12:25394188-25394204
2	ARID3A	chr12:25394206-25394468	K562	blood:	n/a	n/a
3	ARID3A	chr12:25398022-25398752	K562	blood:	n/a	n/a
4	BRCA1	chr12:25394204-25394433	Hela-S3	cervix:	n/a	n/a
5	CCNT2	chr12:25398533-25398850	K562	blood:	n/a	n/a
6	CEBPB	chr12:25394636-25394882	A549	lung:	n/a	n/a
7	CEBPB	chr12:25381582-25381677	H1-hESC	embryonic stem cell:	n/a	chr12:25381648-25381659
8	CEBPB	chr12:25381505-25381836	A549	lung:	n/a	chr12:25381648-25381659
9	CEBPB	chr12:25395446-25395657	A549	lung:	n/a	n/a
10	CEBPB	chr12:25381626-25381688	K562	blood:	n/a	chr12:25381648-25381659
11	CEBPB	chr12:25397809-25397992	K562	blood:	n/a	n/a
12	CEBPB	chr12:25381498-25381791	HepG2	liver:	n/a	chr12:25381648-25381659
13	CEBPB	chr12:25381491-25381790	IMR90	lung:	n/a	chr12:25381648-25381659
14	CEBPB	chr12:25394641-25394890	IMR90	lung:	n/a	n/a
15	CEBPB	chr12:25381627-25381731	Hela-S3	cervix:	n/a	chr12:25381648-25381659
16	CEBPD	chr12:25398424-25398829	K562	blood:	n/a	n/a
17	CTCF	chr12:25394260-25394410	HCPEpiC	choroid plexus:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
18	CTCF	chr12:25393660-25393810	AG04450	lung:	n/a	n/a
19	CTCF	chr12:25393820-25393970	HCPEpiC	choroid plexus:	n/a	n/a
20	CTCF	chr12:25394600-25394750	HMF	breast:	n/a	n/a
21	CTCF	chr12:25394240-25394390	K562	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
22	CTCF	chr12:25394220-25394370	HL-60	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
23	CTCF	chr12:25394240-25394390	AG04449	skin:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
24	CTCF	chr12:25394260-25394410	GM12866	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
25	CTCF	chr12:25393935-25394055	Gliobla	brain:	n/a	n/a
26	CTCF	chr12:25393992-25394047	GM20000	blood:	n/a	n/a
27	CTCF	chr12:25394160-25394310	BE2_C	brain:	n/a	n/a
28	CTCF	chr12:25394220-25394370	NHEK	skin:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
29	CTCF	chr12:25394280-25394430	GM06990	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
30	CTCF	chr12:25394009-25394523	T-47D	breast:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
31	CTCF	chr12:25379240-25379390	GM06990	blood:	n/a	n/a
32	CTCF	chr12:25393840-25393990	SAEC	small airway:	n/a	n/a
33	CTCF	chr12:25394076-25394561	A549	lung:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
34	CTCF	chr12:25394219-25394391	MCF-7	breast:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
35	CTCF	chr12:25393783-25395802	A549	lung:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
36	CTCF	chr12:25394200-25394350	GM12869	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
37	CTCF	chr12:25394197-25394408	LNCaP	prostate:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
38	CTCF	chr12:25393820-25393970	WI-38	lung:	n/a	n/a
39	CTCF	chr12:25394220-25394370	HCT-116	colon:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
40	CTCF	chr12:25394140-25394290	GM12873	blood:	n/a	n/a
41	CTCF	chr12:25394161-25394373	ECC-1	luminal epithelium:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
42	CTCF	chr12:25393990-25394582	HCT-116	colon:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
43	CTCF	chr12:25394166-25394438	Medullo	brain:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
44	CTCF	chr12:25394260-25394410	GM12871	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
45	CTCF	chr12:25394260-25394410	Hela-S3	cervix:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
46	CTCF	chr12:25394220-25394370	HepG2	liver:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
47	CTCF	chr12:25394080-25394644	K562	blood:	n/a	chr12:25394299-25394320 chr12:25394297-25394315 chr12:25394300-25394313 chr12:25394298-25394314
48	CTCF	chr12:25394640-25394790	NHLF	lung:	n/a	n/a
49	CTCF	chr12:25393880-25394030	HRPEpiC	eye:	n/a	n/a
50	CTCF	chr12:25393940-25394090	HCT-116	colon:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:25394244-25394294	HCF	heart:	n/a
2	chr12:25394244-25394294	HCF	heart:	n/a
3	chr12:25380489-25380539	BJ	skin:	n/a
4	chr12:25380489-25380539	HRCEpiC	kidney:	n/a
5	chr12:25389111-25389161	PrEC	prostate:	n/a
6	chr12:25394244-25394294	AoSMC	blood vessel:	n/a
7	chr12:25394244-25394294	NT2-D1	testis:	n/a
8	chr12:25367653-25367703	BJ	skin:	n/a
9	chr12:25380489-25380539	BE2_C	brain:	n/a
10	chr12:25367653-25367703	Jurkat	blood:	n/a
11	chr12:25367653-25367703	T-47D	breast:	n/a
12	chr12:25394244-25394294	BE2_C	brain:	n/a
13	chr12:25380489-25380539	HNPCEpiC	eye:	n/a
14	chr12:25380489-25380539	HEK293	kidney:	embryo
15	chr12:25367653-25367703	AoSMC	blood vessel:	n/a
16	chr12:25367653-25367703	NHBE	bronchial:	n/a
17	chr12:25389111-25389161	GM12891	blood:	n/a
18	chr12:25394244-25394294	A549	lung:	n/a
19	chr12:25389111-25389161	NT2-D1	testis:	n/a
20	chr12:25367653-25367703	NT2-D1	testis:	n/a
21	chr12:25389111-25389161	ovcar-3	ovarian:	n/a
22	chr12:25367653-25367703	HEEpiC	esophagus:	n/a
23	chr12:25389111-25389161	T-47D	breast:	n/a
24	chr12:25380489-25380539	RPTEC	kidney:	n/a
25	chr12:25380489-25380539	Hepatocyte	liver:	n/a
26	chr12:25394244-25394294	Caco-2	colon:	n/a
27	chr12:25394244-25394294	HepG2	liver:	n/a
28	chr12:25367653-25367703	SKMC	muscle:	n/a
29	chr12:25367653-25367703	HMEC	breast:	n/a
30	chr12:25380489-25380539	SKMC	muscle:	n/a
31	chr12:25380489-25380539	NH-A	brain:	n/a
32	chr12:25394244-25394294	HRPEpiC	eye:	n/a
33	chr12:25394244-25394294	GM12892	blood:	n/a
34	chr12:25380489-25380539	HCF	heart:	n/a
35	chr12:25394244-25394294	NHDF-neo	bronchial:	n/a
36	chr12:25367653-25367703	HPAEpiC	pulmonary alveolar:	n/a
37	chr12:25389111-25389161	SK-N-MC	brain:	n/a
38	chr12:25394244-25394294	HEEpiC	esophagus:	n/a
39	chr12:25394244-25394294	BJ	skin:	n/a
40	chr12:25380489-25380539	SAEC	small airway:	n/a
41	chr12:25380489-25380539	ECC-1	luminal epithelium:	n/a
42	chr12:25380489-25380539	IMR90	lung:	fetal
43	chr12:25380489-25380539	Caco-2	colon:	n/a
44	chr12:25380489-25380539	HAEpiC	amniotic membrane:	n/a
45	chr12:25367653-25367703	A549	lung:	n/a
46	chr12:25389111-25389161	GM12892	blood:	n/a
47	chr12:25380489-25380539	AG09309	skin:	n/a
48	chr12:25389111-25389161	ECC-1	luminal epithelium:	n/a
49	chr12:25367653-25367703	HL-60	blood:	n/a
50	chr12:25394244-25394294	IMR90	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr12:25369268..25371670-chr12:25372641..25374777,2	K562	blood:
2	chr12:25390084..25393498-chr12:25395156..25398677,4	K562	blood:
3	chr12:25356292..25358617-chr12:25386148..25388337,2	K562	blood:
4	chr12:25365341..25368190-chr12:25372186..25374038,3	K562	blood:
5	chr12:25382080..25386117-chr12:25388802..25392255,4	MCF-7	breast:
6	chr12:25393614..25397250-chr12:25537759..25541230,3	K562	blood:
7	chr12:25370682..25374580-chr12:25537849..25540511,3	K562	blood:
8	chr12:25397527..25400266-chr12:25538862..25540951,3	K562	blood:
9	chr12:25389042..25391439-chr12:25537346..25540580,3	K562	blood:
10	chr12:25357761..25359956-chr12:25367991..25370766,2	K562	blood:
11	chr12:25383629..25385819-chr12:25387007..25389095,3	K562	blood:
12	chr12:25347765..25350303-chr12:25380801..25383112,2	K562	blood:
13	chr12:25387227..25389943-chr12:25538363..25541492,5	MCF-7	breast:
14	chr12:25387866..25389921-chr12:25394570..25396396,2	K562	blood:
15	chr12:25387876..25389586-chr12:25395973..25398657,2	MCF-7	breast:
16	chr12:25381583..25383823-chr12:25538324..25540925,2	MCF-7	breast:
17	chr12:25393086..25399970-chr12:25400304..25404361,8	MCF-7	breast:
18	chr12:25389042..25390655-chr12:25537346..25539555,2	K562	blood:
19	chr12:25390084..25393498-chr12:25395156..25398677,4	K562	blood:
20	chr12:25365078..25366619-chr12:25369523..25372416,2	MCF-7	breast:
21	chr12:25367183..25369335-chr12:25401740..25404657,2	K562	blood:
22	chr12:25393908..25395243-chr12:25539760..25541064,6	MCF-7	breast:
23	chr12:25367414..25369461-chr12:25539857..25541737,2	K562	blood:
24	chr12:25346926..25348461-chr12:25395724..25397256,2	K562	blood:
25	chr12:25396573..25398478-chr12:25538159..25540026,2	MCF-7	breast:
26	chr12:25395817..25398136-chr12:25402041..25404103,3	MCF-7	breast:
27	chr12:25363402..25366108-chr12:25366322..25370146,4	K562	blood:
28	chr12:25386176..25388499-chr12:25396518..25399211,2	K562	blood:
29	chr12:25391008..25395226-chr12:25537516..25540664,6	MCF-7	breast:
30	chr12:25393601..25395179-chr12:25539007..25540955,10	MCF-7	breast:
31	chr12:25383629..25385819-chr12:25387007..25389095,3	K562	blood:
32	chr12:25393617..25394750-chr12:25539809..25541066,3	K562	blood:
33	chr12:25382080..25386117-chr12:25388802..25392255,4	MCF-7	breast:
34	chr12:25387866..25389921-chr12:25394570..25396396,2	K562	blood:
35	chr12:25390084..25392027-chr12:25396306..25398130,2	K562	blood:
36	chr12:25398070..25400681-chr12:25537482..25540046,2	MCF-7	breast:
37	chr12:25369268..25371670-chr12:25372641..25374777,2	K562	blood:
38	chr12:25347822..25349448-chr12:25393045..25395353,2	K562	blood:
39	chr12:25365341..25368190-chr12:25372186..25374038,3	K562	blood:
40	chr12:25353810..25355602-chr12:25365715..25367870,2	MCF-7	breast:
41	chr12:25374667..25376275-chr12:25538589..25540510,2	MCF-7	breast:
42	chr12:25392189..25396143-chr12:25537109..25540514,5	MCF-7	breast:
43	chr12:25386176..25388499-chr12:25396518..25399211,2	K562	blood:
44	chr12:25387876..25389586-chr12:25395973..25398657,2	MCF-7	breast:
45	chr12:25393339..25393839-chr19:42788047..42788568,2	Hela-S3	cervix:
46	chr12:25390084..25392027-chr12:25396306..25398130,2	K562	blood:

No.	miRNA target gene	miRNA name	Chromosome Location
1	KRAS	hsa-miR-181c-5p	chr12:25367741-25367734
2	KRAS	hsa-miR-181a-5p	chr12:25367741-25367734
3	KRAS	hsa-miR-217	chr12:25367979-25367973
4	KRAS	hsa-miR-193b-3p	chr12:25368071-25368065
5	KRAS	hsa-miR-155-5p	chr12:25368169-25368163

Variant related genes	Relation type
ENSG00000268076	TF binding region
ENSG00000268076	CpG island
ENSG00000079432	chromatin interactions
ENSG00000133703	chromatin interactions
ENSG00000205707	chromatin interactions
ENSG00000118307	chromatin interactions

Extended variants
information (count: 1120 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:1120 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4246229	chr12:25367669-25367670	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs532168382	chr12:25367698-25367699	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs563154735	chr12:25367714-25367715	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs547674105	chr12:25367768-25367769	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs61762443	chr12:25367807-25367808	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs536667699	chr12:25367814-25367815	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs532053887	chr12:25367823-25367824	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs4963859	chr12:25367838-25367839	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs568649511	chr12:25367852-25367853	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs570192659	chr12:25367913-25367914	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs117496205	chr12:25367966-25367967	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs374717740	chr12:25368026-25368027	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs559235039	chr12:25368059-25368060	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs577376969	chr12:25368070-25368071	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs6487461	chr12:25368084-25368085	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs190654557	chr12:25368094-25368095	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs373759361	chr12:25368096-25368097	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs542639925	chr12:25368130-25368131	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs560523614	chr12:25368157-25368158	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs114748473	chr12:25368172-25368173	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs193150345	chr12:25368236-25368237	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs184886249	chr12:25368296-25368297	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs532360785	chr12:25368339-25368340	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs547244164	chr12:25368342-25368343	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs201789109	chr12:25368366-25368367	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs201170656	chr12:25368380-25368381	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs201967696	chr12:25368387-25368388	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs529925358	chr12:25368398-25368399	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs373169526	chr12:25368405-25368406	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs200970347	chr12:25368410-25368411	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs374681135	chr12:25368413-25368414	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs397517476	chr12:25368449-25368450	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs368557003	chr12:25368451-25368452	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs200186819	chr12:25368455-25368456	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs4362222	chr12:25368462-25368463	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs539423712	chr12:25368466-25368467	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs376556618	chr12:25368506-25368507	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs559719205	chr12:25368593-25368594	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs376992543	chr12:25368594-25368595	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs556158661	chr12:25368609-25368610	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs113001317	chr12:25368713-25368714	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs145862422	chr12:25368718-25368719	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs78580012	chr12:25368774-25368775	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs535235311	chr12:25368786-25368787	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs553272850	chr12:25368828-25368829	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs188425168	chr12:25368943-25368944	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs180793636	chr12:25368947-25368948	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs148415696	chr12:25369021-25369022	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs12578773	chr12:25369027-25369028	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs535748329	chr12:25369041-25369042	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Malignant germ cell tumour	17285132	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Myxofibrosarcoma	16751306	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Acute myeloid leukemia	16864856	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	17133270	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16397240	CNVD
Neurodevelopmental disorder	22521361	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	21509527	CNVD
Autism	22102821	CNVD
Follicular lymphoma	18703704	CNVD
Lung cancer	18438408	CNVD
Lung cancer	21911935	CNVD
Breast cancer	22048815	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Heart disease	21282601	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	17925434	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Gastric cancer	24379144	CNVD
Gastric cancer	19545448	CNVD
Lung cancer	20031968	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung adenocarcinoma	19826477	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19826477	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	17504988	CNVD
Bipolar disorder	19114987	CNVD
Lung cancer	19671679	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Lung cancer	21569311	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Lung adenocarcinoma	17982442	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Ovarian cancer	21720365	CNVD
Cancer	17699850	CNVD
Ovarian cancer	17699850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Endometrial cancer	19261849	CNVD
Gastric adenocarcinoma	22014070	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:748 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:25348600-25402200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr12:25348600-25403200	Weak transcription	Spleen	Spleen
3	chr12:25349000-25369200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr12:25349000-25372800	Weak transcription	Aorta	Aorta
5	chr12:25349000-25374200	Weak transcription	Lung	lung
6	chr12:25349000-25386000	Weak transcription	Left Ventricle	heart
7	chr12:25349000-25402400	Weak transcription	Right Ventricle	heart
8	chr12:25349400-25388200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr12:25349400-25388600	Weak transcription	NHLF	lung
10	chr12:25349400-25393800	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr12:25349400-25396000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr12:25349400-25401800	Weak transcription	Fetal Brain Male	brain
13	chr12:25349400-25402600	Weak transcription	Brain Germinal Matrix	brain
14	chr12:25349600-25389000	Weak transcription	Brain Angular Gyrus	brain
15	chr12:25349600-25394600	Weak transcription	Rectal Smooth Muscle	rectum
16	chr12:25349600-25402600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr12:25349600-25402600	Weak transcription	Brain Cingulate Gyrus	brain
18	chr12:25349600-25402600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr12:25349600-25402600	Weak transcription	Stomach Smooth Muscle	stomach
20	chr12:25349800-25379200	Weak transcription	Brain Anterior Caudate	brain
21	chr12:25349800-25386200	Weak transcription	Hela-S3	cervix
22	chr12:25349800-25390200	Weak transcription	K562	blood
23	chr12:25350000-25372600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr12:25350000-25402800	Weak transcription	Ovary	ovary
25	chr12:25353200-25378800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr12:25354000-25402400	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr12:25354400-25368200	Weak transcription	HUVEC	blood vessel
28	chr12:25354400-25369000	Weak transcription	Brain Hippocampus Middle	brain
29	chr12:25354400-25378400	Weak transcription	HMEC	breast
30	chr12:25354400-25402200	Weak transcription	Pancreas	Pancrea
31	chr12:25354600-25389000	Weak transcription	HSMMtube	muscle
32	chr12:25355400-25370600	Strong transcription	Monocytes-CD14+_RO01746	blood
33	chr12:25355800-25396000	Weak transcription	Small Intestine	intestine
34	chr12:25356200-25372800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr12:25356600-25377600	Weak transcription	Gastric	stomach
36	chr12:25356600-25402600	Weak transcription	Fetal Heart	heart
37	chr12:25360200-25379200	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr12:25360200-25380200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
39	chr12:25360400-25371200	Weak transcription	Fetal Lung	lung
40	chr12:25360400-25377000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr12:25360800-25388600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr12:25360800-25389200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr12:25360800-25402200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr12:25361000-25376800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr12:25361000-25378600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr12:25361000-25379800	Weak transcription	Fetal Muscle Leg	muscle
47	chr12:25361000-25383800	Weak transcription	NHEK	skin
48	chr12:25361000-25388000	Weak transcription	A549	lung
49	chr12:25361000-25388600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
50	chr12:25361000-25388800	Weak transcription	Esophagus	oesophagus

The 2.0 version of rSNPBase

Variant report

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