Variant report

Variant	nsv898976
Chromosome Location	chr12:37964922-38640613
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:6046)
CpG islands
(count:2692)
Chromatin interactive
region (count:38)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:6046 , 50 per page) page: 1 2 3 4 5 6 7 ... 121

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:38493896-38494086	K562	blood:	n/a	n/a
2	ARID3A	chr12:38248444-38248820	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:38448696-38448896	HepG2	liver:	n/a	n/a
4	ARID3A	chr12:38024372-38024405	HepG2	liver:	n/a	n/a
5	ARID3A	chr12:38482212-38482642	K562	blood:	n/a	n/a
6	ARID3A	chr12:38032308-38032336	HepG2	liver:	n/a	n/a
7	ARID3A	chr12:38518229-38518929	HepG2	liver:	n/a	n/a
8	ARID3A	chr12:38532537-38532888	HepG2	liver:	n/a	n/a
9	ARID3A	chr12:38543626-38543997	K562	blood:	n/a	n/a
10	ARID3A	chr12:38448701-38449068	K562	blood:	n/a	n/a
11	ATF1	chr12:38016229-38016615	K562	blood:	n/a	n/a
12	ATF1	chr12:38027456-38027826	K562	blood:	n/a	n/a
13	ATF1	chr12:38050877-38051247	K562	blood:	n/a	n/a
14	ATF1	chr12:38457173-38457374	K562	blood:	n/a	n/a
15	ATF1	chr12:38580930-38581004	K562	blood:	n/a	n/a
16	ATF1	chr12:38053939-38054308	K562	blood:	n/a	n/a
17	ATF1	chr12:38046404-38046604	K562	blood:	n/a	n/a
18	ATF1	chr12:38013621-38013821	K562	blood:	n/a	n/a
19	ATF1	chr12:38449777-38450205	K562	blood:	n/a	n/a
20	ATF1	chr12:38258619-38258986	K562	blood:	n/a	n/a
21	ATF1	chr12:38006705-38007242	K562	blood:	n/a	n/a
22	ATF1	chr12:38011738-38011775	K562	blood:	n/a	n/a
23	ATF1	chr12:38235844-38236214	K562	blood:	n/a	n/a
24	ATF1	chr12:38110352-38110437	K562	blood:	n/a	n/a
25	ATF1	chr12:38008434-38009553	K562	blood:	n/a	n/a
26	ATF1	chr12:38562455-38562511	K562	blood:	n/a	n/a
27	ATF1	chr12:38592349-38592545	K562	blood:	n/a	n/a
28	ATF1	chr12:38044386-38044756	K562	blood:	n/a	n/a
29	ATF1	chr12:37991636-37991838	K562	blood:	n/a	n/a
30	ATF1	chr12:38034993-38035768	K562	blood:	n/a	n/a
31	ATF1	chr12:38024205-38024572	K562	blood:	n/a	n/a
32	ATF1	chr12:38248442-38248819	K562	blood:	n/a	n/a
33	ATF1	chr12:38028828-38029308	K562	blood:	n/a	n/a
34	ATF1	chr12:38092046-38092248	K562	blood:	n/a	n/a
35	ATF1	chr12:38045805-38046170	K562	blood:	n/a	n/a
36	ATF1	chr12:38066738-38067659	K562	blood:	n/a	n/a
37	ATF1	chr12:38017022-38017423	K562	blood:	n/a	n/a
38	ATF3	chr12:38518161-38518657	A549	lung:	n/a	n/a
39	ATF3	chr12:38248534-38248701	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF3	chr12:38450770-38451371	A549	lung:	n/a	n/a
41	ATF3	chr12:38248441-38248721	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr12:38493592-38493998	K562	blood:	n/a	n/a
43	BACH1	chr12:38036708-38037495	K562	blood:	n/a	n/a
44	BACH1	chr12:38103735-38103763	K562	blood:	n/a	n/a
45	BACH1	chr12:38087472-38087697	K562	blood:	n/a	n/a
46	BACH1	chr12:38082364-38082737	K562	blood:	n/a	n/a
47	BACH1	chr12:38361554-38361929	K562	blood:	n/a	n/a
48	BACH1	chr12:38483362-38483596	K562	blood:	n/a	n/a
49	BACH1	chr12:38008196-38008825	K562	blood:	n/a	n/a
50	BACH1	chr12:38445410-38445790	K562	blood:	n/a	n/a

(count:2692 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:38535710-38535760	GM12892	blood:	n/a
2	chr12:38535710-38535760	GM06990	blood:	n/a
3	chr12:38557661-38557711	AG09309	skin:	n/a
4	chr12:38557350-38557400	A549	lung:	n/a
5	chr12:38555758-38555808	HMEC	breast:	n/a
6	chr12:38560974-38561024	RPTEC	kidney:	n/a
7	chr12:38555758-38555808	AG09309	skin:	n/a
8	chr12:38555256-38555306	HRPEpiC	eye:	n/a
9	chr12:38535710-38535760	GM12892	blood:	n/a
10	chr12:38535710-38535760	GM06990	blood:	n/a
11	chr12:38557661-38557711	AG09309	skin:	n/a
12	chr12:38557350-38557400	A549	lung:	n/a
13	chr12:38555758-38555808	HMEC	breast:	n/a
14	chr12:38560974-38561024	RPTEC	kidney:	n/a
15	chr12:38555758-38555808	AG09309	skin:	n/a
16	chr12:38555256-38555306	HRPEpiC	eye:	n/a
17	chr12:38550112-38550162	IMR90	lung:	fetal
18	chr12:38595601-38595651	ovcar-3	ovarian:	n/a
19	chr12:38449116-38449166	HCF	heart:	n/a
20	chr12:38545214-38545264	PANC-1	pancreas:	n/a
21	chr12:38595601-38595651	Hepatocyte	liver:	n/a
22	chr12:38532352-38532402	PrEC	prostate:	n/a
23	chr12:38553846-38553896	HMEC	breast:	n/a
24	chr12:38595404-38595454	GM06990	blood:	n/a
25	chr12:38558124-38558174	LNCaP	prostate:	n/a
26	chr12:38545214-38545264	HNPCEpiC	eye:	n/a
27	chr12:38493785-38493835	AG10803	skin:	n/a
28	chr12:38531935-38531985	MCF10A-Er-Src	breast:	n/a
29	chr12:38546326-38546376	MCF10A-Er-Src	breast:	n/a
30	chr12:38555558-38555608	GM12891	blood:	n/a
31	chr12:38545214-38545264	GM12891	blood:	n/a
32	chr12:38550112-38550162	GM12878	blood:	n/a
33	chr12:38493785-38493835	HEK293	kidney:	embryo
34	chr12:38550112-38550162	HCM	heart:	n/a
35	chr12:38552636-38552686	HCM	heart:	n/a
36	chr12:38449116-38449166	GM12892	blood:	n/a
37	chr12:38447229-38447279	PrEC	prostate:	n/a
38	chr12:38493678-38493728	GM12891	blood:	n/a
39	chr12:38449116-38449166	IMR90	lung:	fetal
40	chr12:38532458-38532508	LNCaP	prostate:	n/a
41	chr12:38447948-38447998	HRCEpiC	kidney:	n/a
42	chr12:38447948-38447998	AG04450	lung:	fetal
43	chr12:38555256-38555306	NH-A	brain:	n/a
44	chr12:38550112-38550162	SAEC	small airway:	n/a
45	chr12:38532352-38532402	NB4	blood:	n/a
46	chr12:38555558-38555608	HRPEpiC	eye:	n/a
47	chr12:38448213-38448263	HEK293	kidney:	embryo
48	chr12:38447636-38447686	AG10803	skin:	n/a
49	chr12:38595601-38595651	PANC-1	pancreas:	n/a
50	chr12:38532352-38532402	SKMC	muscle:	n/a

(count:38 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:156184890..156186421-chr12:38543820..38545329,2	MCF-7	breast:
2	chr12:38464739..38465619-chr4:45719335..45720093,2	MCF-7	breast:
3	chr12:38542306..38543824-chr20:26188496..26191492,2	K562	blood:
4	chr12:38032912..38033432-chr6:58774035..58775015,2	MCF-7	breast:
5	chr12:38444597..38445444-chr16:33958723..33959994,4	MCF-7	breast:
6	chr12:38444829..38445449-chr2:133022690..133023552,2	MCF-7	breast:
7	chr12:38543803..38545320-chr21:9824316..9826615,2	K562	blood:
8	chr12:38542325..38545309-chr16:33964713..33967583,2	K562	blood:
9	chr12:38532267..38533149-chr12:38709875..38710612,2	K562	blood:
10	chr12:38450015..38451840-chr2:133028967..133030976,3	MCF-7	breast:
11	chr12:38536776..38537298-chr14:88237597..88238190,6	MCF-7	breast:
12	chr12:38447143..38447662-chr2:133026232..133026787,2	MCF-7	breast:
13	chr11:48862246..48863766-chr12:38036979..38038502,2	MCF-7	breast:
14	chr12:38032931..38033431-chr6:58776879..58777388,2	MCF-7	breast:
15	chr1:156184764..156186317-chr12:38543820..38545325,2	K562	blood:
16	chr12:38444887..38445591-chr16:33959228..33959997,3	MCF-7	breast:
17	chr12:38543320..38543832-chr21:9825931..9826770,2	K562	blood:
18	chr12:38444306..38445077-chr21:37485779..37486279,2	MCF-7	breast:
19	chr12:38535401..38535902-chr2:133016817..133017415,2	MCF-7	breast:
20	chr12:38444870..38446430-chr16:33959034..33960923,3	MCF-7	breast:
21	chr12:38444806..38446368-chr16:33959419..33960990,2	MCF-7	breast:
22	chr12:38143553..38144054-chr18:18519761..18520264,2	MCF-7	breast:
23	chr1:156185732..156186437-chr12:38543803..38544322,4	MCF-7	breast:
24	chr12:38092578..38093097-chr2:92306640..92307159,2	MCF-7	breast:
25	chr12:38637847..38640659-chr12:38643822..38646474,2	K562	blood:
26	chr12:38444870..38446396-chr2:133021688..133023192,2	K562	blood:
27	chr12:38532568..38533113-chr12:39666750..39667387,2	K562	blood:
28	chr12:38031911..38033432-chr6:58776341..58779018,2	MCF-7	breast:
29	chr12:38038013..38039001-chr3:156392284..156392894,2	MCF-7	breast:
30	chr12:38532230..38532845-chr12:38709831..38710738,3	MCF-7	breast:
31	chr1:156185820..156186795-chr12:38543314..38544329,6	MCF-7	breast:
32	chr12:38536304..38537296-chr14:88237622..88238153,2	K562	blood:
33	chr12:34405769..34407368-chr12:38464924..38466718,2	K562	blood:
34	chr1:156185862..156186566-chr12:38543820..38544329,3	MCF-7	breast:
35	chr12:38542302..38543806-chr20:26188737..26191492,2	K562	blood:
36	chr12:38062177..38062716-chr12:38709963..38710509,2	MCF-7	breast:
37	chr12:38031932..38033432-chr6:58775709..58777615,2	MCF-7	breast:
38	chr1:156185761..156186730-chr12:38543308..38544330,7	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CPNE8-6	chr12:38599188-38599814	NONHSAT027678
2	lnc-CPNE8-7	chr12:38472331-38472801	NONHSAT027673
3	lnc-CPNE8-8	chr12:38450354-38450755	NONHSAT027671
4	lnc-ALG10B-4	chr12:38520814-38520995	NONHSAT027675
5	lnc-ALG10B-10	chr12:37969385-37969515	NONHSAT027669
6	lnc-CPNE8-8	chr12:38447469-38447570	NONHSAT027671
7	lnc-ALG10B-4	chr12:38517498-38517593	NONHSAT027675
8	lnc-ALG10B-10	chr12:37970091-37970259	NONHSAT027669
9	lnc-ALG10B-6	chr12:38451526-38451849	NONHSAT027672
10	lnc-ALG10B-6	chr12:38449724-38450322	NONHSAT027672
11	lnc-ALG10B-10	chr12:37970091-37970186	NONHSAT027668
12	lnc-ALG10B-10	chr12:37969251-37969555	NONHSAT027668

No data

Variant related genes	Relation type
TUBB8P5	TF binding region
ENSG00000258368	TF binding region
ENSG00000258360	TF binding region
RNA5SP358	TF binding region
RNA5SP359	TF binding region
ENSG00000257173	TF binding region
ENSG00000257292	TF binding region
ENSG00000258278	TF binding region
TUBB8P5	CpG island
ENSG00000258368	CpG island
ENSG00000258360	CpG island
RNA5SP358	CpG island
RNA5SP359	CpG island
ENSG00000257173	CpG island
ENSG00000257292	CpG island
ENSG00000258278	CpG island
ENSG00000227195	chromatin interactions
ENSG00000200434	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000163659	chromatin interactions
ENSG00000175548	chromatin interactions
ENSG00000264462	chromatin interactions

Extended variants
information (count: 46481 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:46481 , 50 per page) page: 1 2 3 4 5 6 7 ... 930

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs58690601	chr12:37969298-37969299	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs567371315	chr12:37969300-37969301	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs536202683	chr12:37969304-37969305	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs555902304	chr12:37969313-37969314	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs569904868	chr12:37969321-37969322	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs538542160	chr12:37969322-37969323	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs558464143	chr12:37969375-37969376	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs183993682	chr12:37969406-37969407	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs367882493	chr12:37969554-37969555	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs569734770	chr12:37970131-37970132	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs12322535	chr12:37970164-37970165	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs7968961	chr12:37970165-37970166	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs540153727	chr12:37970169-37970170	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs548495201	chr12:37970182-37970183	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs568156159	chr12:37970194-37970195	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs537301507	chr12:37970200-37970201	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs7957612	chr12:37970217-37970218	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs528881210	chr12:37970221-37970222	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs12426330	chr12:37970228-37970229	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs191644976	chr12:37982240-37982241	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs184152560	chr12:37982272-37982273	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs539787709	chr12:37982295-37982296	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs570275533	chr12:37982332-37982333	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs539349206	chr12:37982341-37982342	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs141756210	chr12:37982352-37982353	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs572347747	chr12:37982359-37982360	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs534412719	chr12:37982362-37982363	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs76188630	chr12:37982435-37982436	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs574057392	chr12:37982473-37982474	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs543071603	chr12:37982476-37982477	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs7314829	chr12:37982478-37982479	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs188557443	chr12:37982479-37982480	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs540328859	chr12:37982483-37982484	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs546118341	chr12:37982500-37982501	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs151245997	chr12:37989604-37989605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs541320701	chr12:37989611-37989612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs7301679	chr12:37989629-37989630	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs529936753	chr12:37989634-37989635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs543126812	chr12:37989654-37989655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs139278780	chr12:37989663-37989664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs117058915	chr12:37989679-37989680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs551763209	chr12:37989680-37989681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs58039291	chr12:37989690-37989691	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs182852892	chr12:37989717-37989718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs375329741	chr12:37989789-37989790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs11169555	chr12:37989806-37989807	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs145274717	chr12:37989810-37989811	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs536477901	chr12:37989840-37989841	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs556360719	chr12:37989863-37989864	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs569376078	chr12:37989873-37989874	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	21509527	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Autism	20858243	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Osteosarcoma	21215367	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Cancer	21272361	CNVD
Autism	20531469	CNVD

Chromatin state (count:1955 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:37982200-37982600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr12:37989600-37991400	Weak transcription	HUVEC	blood vessel
3	chr12:37989800-38041200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
4	chr12:37990000-37990400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:37990000-37990400	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
6	chr12:37990000-37990400	ZNF genes & repeats	Psoas Muscle	Psoas
7	chr12:37990000-37993400	ZNF genes & repeats	Primary T cells from cord blood	blood
8	chr12:37990000-38040800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
9	chr12:37990400-37993600	Weak transcription	Psoas Muscle	Psoas
10	chr12:37990400-38014000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr12:37991400-37991600	ZNF genes & repeats	HUVEC	blood vessel
12	chr12:37991400-37992200	ZNF genes & repeats	Fetal Heart	heart
13	chr12:37991400-37993200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
14	chr12:37991600-37992200	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr12:37991600-37994000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
16	chr12:37991600-37994400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
17	chr12:37991800-37992200	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
18	chr12:37991800-37992200	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
19	chr12:37991800-37998200	Weak transcription	K562	blood
20	chr12:37993600-37994400	Active TSS	Psoas Muscle	Psoas
21	chr12:37995200-38003400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
22	chr12:37997200-38000200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
23	chr12:37997400-37997800	ZNF genes & repeats	Fetal Brain Male	brain
24	chr12:37997400-37998400	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr12:37997800-37998800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
26	chr12:37997800-38000200	ZNF genes & repeats	HepG2	liver
27	chr12:37998000-37998400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
28	chr12:37998000-37998600	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
29	chr12:37998000-38002400	ZNF genes & repeats	Primary T cells from cord blood	blood
30	chr12:37998000-38002800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
31	chr12:37998200-37998400	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr12:37998200-37998400	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr12:37998200-37998400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr12:37998200-37998400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr12:37998200-37998400	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
36	chr12:37998200-37998400	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
37	chr12:37998200-37998400	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
38	chr12:37998200-37998400	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
39	chr12:37998200-37998400	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
40	chr12:37998200-37998400	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr12:37998200-37998400	Enhancers	Aorta	Aorta
42	chr12:37998200-37998400	ZNF genes & repeats	Liver	Liver
43	chr12:37998200-37998400	ZNF genes & repeats	Brain Cingulate Gyrus	brain
44	chr12:37998200-37998400	ZNF genes & repeats	Brain Hippocampus Middle	brain
45	chr12:37998200-37998400	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
46	chr12:37998200-37998400	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
47	chr12:37998200-37998400	ZNF genes & repeats	Brain Substantia Nigra	brain
48	chr12:37998200-37998400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
49	chr12:37998200-37998400	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
50	chr12:37998200-37998400	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links