Variant report

Variant nsv899012
Chromosome Location chr12:39531466-39594506
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:240 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:39531400-39531800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
2 chr12:39531400-39532400 Enhancers Brain Germinal Matrix brain
3 chr12:39531600-39532000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:39531600-39532200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr12:39531600-39532600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr12:39531600-39532600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr12:39531800-39533000 Enhancers Fetal Brain Male brain
8 chr12:39531800-39533400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:39532000-39532200 Enhancers Cortex derived primary cultured neurospheres brain
10 chr12:39532200-39532400 Enhancers iPS-15b Cell Line embryonic stem cell
11 chr12:39532200-39532400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
12 chr12:39532200-39532400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr12:39532400-39533400 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr12:39532600-39533200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr12:39533400-39533600 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr12:39538200-39538400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
17 chr12:39538200-39538400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr12:39538200-39539600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
19 chr12:39538400-39538600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:39538400-39538600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr12:39538400-39538600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
22 chr12:39538400-39538600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
23 chr12:39538400-39538600 Bivalent Enhancer Liver Liver
24 chr12:39538400-39538600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
25 chr12:39538400-39538600 Bivalent Enhancer Fetal Muscle Leg muscle
26 chr12:39538400-39538600 Flanking Bivalent TSS/Enh Fetal Stomach stomach
27 chr12:39538400-39538800 Bivalent Enhancer Primary hematopoietic stem cells blood
28 chr12:39538400-39538800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
29 chr12:39538400-39538800 Bivalent Enhancer Placenta Placenta
30 chr12:39538400-39539000 Bivalent/Poised TSS Brain Germinal Matrix brain
31 chr12:39538400-39539000 Active TSS Colonic Mucosa Colon
32 chr12:39538400-39539000 Active TSS Pancreas Pancrea
33 chr12:39538400-39539200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr12:39538400-39539200 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
35 chr12:39538400-39539200 Flanking Bivalent TSS/Enh Right Ventricle heart
36 chr12:39538400-39539200 Bivalent/Poised TSS A549 lung
37 chr12:39538400-39539400 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
38 chr12:39538400-39539400 Active TSS Brain Anterior Caudate brain
39 chr12:39538400-39539400 Active TSS Colon Smooth Muscle Colon
40 chr12:39538400-39539600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
41 chr12:39538400-39539600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr12:39538400-39539600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
43 chr12:39538400-39539600 Bivalent/Poised TSS Fetal Brain Female brain
44 chr12:39538400-39539600 Active TSS Stomach Smooth Muscle stomach
45 chr12:39538400-39539800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
46 chr12:39538400-39539800 Active TSS Brain Hippocampus Middle brain
47 chr12:39538400-39539800 Active TSS Brain Substantia Nigra brain
48 chr12:39538400-39539800 Active TSS Rectal Smooth Muscle rectum
49 chr12:39538600-39538800 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
50 chr12:39538600-39538800 Bivalent/Poised TSS Cortex derived primary cultured neurospheres brain

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