Variant report

Variant	nsv899071
Chromosome Location	chr12:49927148-49955935
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1038)
CpG islands
(count:1712)
Chromatin interactive
region (count:75)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1038 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:49947310-49947598	K562	blood:	n/a	n/a
2	ARID3A	chr12:49947303-49947618	HepG2	liver:	n/a	n/a
3	ATF1	chr12:49945439-49945688	K562	blood:	n/a	n/a
4	ATF3	chr12:49947309-49947670	K562	blood:	n/a	n/a
5	ATF3	chr12:49947363-49947567	K562	blood:	n/a	n/a
6	BACH1	chr12:49942865-49943102	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr12:49931662-49931790	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL3	chr12:49931825-49932343	A549	lung:	n/a	chr12:49931882-49931895 chr12:49932310-49932319 chr12:49931878-49931891
9	BCL3	chr12:49930560-49930919	GM12878	blood:	n/a	n/a
10	BCL3	chr12:49929959-49930186	GM12878	blood:	n/a	n/a
11	BHLHE40	chr12:49931999-49932001	K562	blood:	n/a	n/a
12	BHLHE40	chr12:49945363-49945750	K562	blood:	n/a	n/a
13	BHLHE40	chr12:49932744-49932828	K562	blood:	n/a	n/a
14	BHLHE40	chr12:49945410-49945650	HepG2	liver:	n/a	n/a
15	CCNT2	chr12:49942866-49943112	K562	blood:	n/a	chr12:49943086-49943095
16	CCNT2	chr12:49932823-49933078	K562	blood:	n/a	n/a
17	CEBPB	chr12:49938186-49938189	HepG2	liver:	n/a	n/a
18	CEBPB	chr12:49945812-49946125	A549	lung:	n/a	n/a
19	CEBPB	chr12:49945793-49946151	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr12:49945854-49946146	IMR90	lung:	n/a	n/a
21	CEBPB	chr12:49945892-49946027	HepG2	liver:	n/a	n/a
22	CEBPB	chr12:49945784-49946138	HepG2	liver:	n/a	n/a
23	CEBPB	chr12:49943040-49943181	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr12:49945769-49946220	MCF-7	breast:	n/a	n/a
25	CHD2	chr12:49928690-49928743	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD2	chr12:49942994-49943287	H1-hESC	embryonic stem cell:	n/a	n/a
27	CREB1	chr12:49931581-49931900	A549	lung:	n/a	n/a
28	CTBP2	chr12:49931693-49932263	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr12:49947400-49947550	GM12878	blood:	n/a	n/a
30	CTCF	chr12:49947420-49947570	GM12864	blood:	n/a	n/a
31	CTCF	chr12:49942909-49943087	H1-hESC	embryonic stem cell:	n/a	chr12:49943001-49943014 chr12:49943004-49943017
32	CTCF	chr12:49947351-49947601	GM13977	blood:	n/a	n/a
33	CTCF	chr12:49951680-49951830	AG09319	gingival:	n/a	n/a
34	CTCF	chr12:49951663-49951900	GM12892	blood:	n/a	n/a
35	CTCF	chr12:49942760-49942910	GM12864	blood:	n/a	n/a
36	CTCF	chr12:49942900-49943050	GM12873	blood:	n/a	chr12:49943001-49943014 chr12:49943004-49943017
37	CTCF	chr12:49947400-49947550	AoAF	blood vessel:	n/a	n/a
38	CTCF	chr12:49947400-49947550	GM12864	blood:	n/a	n/a
39	CTCF	chr12:49947420-49947570	HMF	breast:	n/a	n/a
40	CTCF	chr12:49947346-49947630	Hela-S3	cervix:	n/a	n/a
41	CTCF	chr12:49947327-49947623	Spleen_OC	spleen:	n/a	n/a
42	CTCF	chr12:49947320-49947470	HRPEpiC	eye:	n/a	n/a
43	CTCF	chr12:49942980-49943130	AG09309	skin:	n/a	chr12:49943001-49943014 chr12:49943004-49943017
44	CTCF	chr12:49942920-49943070	GM12872	blood:	n/a	chr12:49943001-49943014 chr12:49943004-49943017
45	CTCF	chr12:49931942-49932190	GM12891	blood:	n/a	n/a
46	CTCF	chr12:49943000-49943150	HRE	kidney:	n/a	chr12:49943001-49943014 chr12:49943004-49943017
47	CTCF	chr12:49947340-49947639	K562	blood:	n/a	n/a
48	CTCF	chr12:49947380-49947530	GM12865	blood:	n/a	n/a
49	CTCF	chr12:49931940-49932090	WERI-Rb-1	eye:	n/a	n/a
50	CTCF	chr12:49947440-49947590	GM12871	blood:	n/a	n/a

(count:1712 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:49942982-49943032	SKMC	muscle:	n/a
2	chr12:49932216-49932266	PrEC	prostate:	n/a
3	chr12:49932857-49932907	HepG2	liver:	n/a
4	chr12:49943606-49943656	ovcar-3	ovarian:	n/a
5	chr12:49942982-49943032	SKMC	muscle:	n/a
6	chr12:49932216-49932266	PrEC	prostate:	n/a
7	chr12:49932857-49932907	HepG2	liver:	n/a
8	chr12:49943606-49943656	ovcar-3	ovarian:	n/a
9	chr12:49937997-49938047	MCF10A-Er-Src	breast:	n/a
10	chr12:49932860-49932910	HepG2	liver:	n/a
11	chr12:49933636-49933686	HRPEpiC	eye:	n/a
12	chr12:49932857-49932907	HNPCEpiC	eye:	n/a
13	chr12:49932857-49932907	AoSMC	blood vessel:	n/a
14	chr12:49933636-49933686	K562	blood:	n/a
15	chr12:49942787-49942837	GM12878	blood:	n/a
16	chr12:49932857-49932907	Hela-S3	cervix:	n/a
17	chr12:49942787-49942837	Jurkat	blood:	n/a
18	chr12:49928924-49928974	HEK293	kidney:	embryo
19	chr12:49936430-49936480	H1-hESC	embryonic stem cell:	embryo
20	chr12:49936430-49936480	Hela-S3	cervix:	n/a
21	chr12:49943606-49943656	HCF	heart:	n/a
22	chr12:49932860-49932910	GM06990	blood:	n/a
23	chr12:49932857-49932907	BJ	skin:	n/a
24	chr12:49943606-49943656	HRCEpiC	kidney:	n/a
25	chr12:49942982-49943032	AG04450	lung:	fetal
26	chr12:49937852-49937902	HRCEpiC	kidney:	n/a
27	chr12:49931501-49931551	K562	blood:	n/a
28	chr12:49942787-49942837	HIPEpiC	eye:	n/a
29	chr12:49947416-49947466	NT2-D1	testis:	n/a
30	chr12:49942982-49943032	NB4	blood:	n/a
31	chr12:49932860-49932910	RPTEC	kidney:	n/a
32	chr12:49932972-49933022	BJ	skin:	n/a
33	chr12:49942757-49942807	GM12878	blood:	n/a
34	chr12:49933636-49933686	H1-hESC	embryonic stem cell:	embryo
35	chr12:49942982-49943032	HEEpiC	esophagus:	n/a
36	chr12:49951757-49951807	RPTEC	kidney:	n/a
37	chr12:49951757-49951807	HCF	heart:	n/a
38	chr12:49942787-49942837	GM19239	blood:	n/a
39	chr12:49942982-49943032	IMR90	lung:	fetal
40	chr12:49943340-49943390	SK-N-SH	brain:	n/a
41	chr12:49952407-49952457	A549	lung:	n/a
42	chr12:49932972-49933022	PANC-1	pancreas:	n/a
43	chr12:49934029-49934079	HRE	kidney:	n/a
44	chr12:49943606-49943656	HRE	kidney:	n/a
45	chr12:49931501-49931551	PrEC	prostate:	n/a
46	chr12:49932857-49932907	H1-hESC	embryonic stem cell:	embryo
47	chr12:49936430-49936480	HAEpiC	amniotic membrane:	n/a
48	chr12:49932972-49933022	ProgFib	skin:	n/a
49	chr12:49932216-49932266	HCPEpiC	choroid plexus:	n/a
50	chr12:49937852-49937902	HCT-116	colon:	n/a

(count:75 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr12:49752171..49753157-chr12:49947278..49947948,5	MCF-7	breast:
2	chr12:49759353..49762276-chr12:49930939..49933731,4	K562	blood:
3	chr12:49937336..49938883-chr12:49959337..49961156,2	MCF-7	breast:
4	chr12:49657477..49660356-chr12:49930384..49933439,3	K562	blood:
5	chr12:49924771..49927060-chr12:49927264..49929041,2	K562	blood:
6	chr12:49939604..49941296-chr12:49942002..49944105,2	K562	blood:
7	chr12:49934751..49937264-chr12:49959231..49961554,2	MCF-7	breast:
8	chr12:49949405..49950994-chr12:49951918..49953792,2	K562	blood:
9	chr12:49936941..49938508-chr12:49948825..49950668,2	MCF-7	breast:
10	chr12:49947295..49947883-chr12:50003277..50004008,2	MCF-7	breast:
11	chr12:49951662..49952230-chr12:50017104..50017647,2	MCF-7	breast:
12	chr12:49759558..49762549-chr12:49947414..49949768,3	MCF-7	breast:
13	chr12:49752160..49752717-chr12:49951702..49952277,2	MCF-7	breast:
14	chr12:49947392..49947945-chr12:49973991..49974565,2	K562	blood:
15	chr12:49758090..49761584-chr12:49941577..49946568,5	K562	blood:
16	chr12:49453309..49455961-chr12:49948897..49951747,2	MCF-7	breast:
17	chr12:49740832..49741606-chr12:49942595..49943430,2	K562	blood:
18	chr12:49758102..49760925-chr12:49950793..49953218,2	MCF-7	breast:
19	chr12:49946990..49947903-chr12:49974017..49974981,10	MCF-7	breast:
20	chr12:49954419..49956217-chr12:50016966..50019310,2	MCF-7	breast:
21	chr12:49759638..49761406-chr12:49937675..49939250,2	MCF-7	breast:
22	chr12:49939089..49944852-chr12:49945260..49949994,8	MCF-7	breast:
23	chr12:49931274..49936005-chr12:49943051..49946094,6	K562	blood:
24	chr12:49759499..49761453-chr12:49953026..49955590,2	MCF-7	breast:
25	chr12:49932766..49934381-chr12:49946781..49949043,2	MCF-7	breast:
26	chr12:49938158..49941104-chr12:49951037..49955376,3	K562	blood:
27	chr12:49933783..49936509-chr12:49951821..49953726,3	K562	blood:
28	chr12:49751555..49753857-chr12:49947807..49949474,2	MCF-7	breast:
29	chr12:49759326..49761606-chr12:49928836..49931818,3	MCF-7	breast:
30	chr12:49883221..49884060-chr12:49947029..49947956,2	MCF-7	breast:
31	chr12:49925851..49930721-chr12:49933231..49936704,4	MCF-7	breast:
32	chr12:49936941..49938508-chr12:49948825..49950668,2	MCF-7	breast:
33	chr12:49752238..49752947-chr12:49951319..49952178,4	MCF-7	breast:
34	chr12:49930852..49937653-chr12:49953841..49959391,7	K562	blood:
35	chr12:49933783..49936509-chr12:49951821..49953726,3	K562	blood:
36	chr12:49940484..49942090-chr12:49955835..49957445,2	K562	blood:
37	chr12:49941038..49943028-chr12:49974418..49976418,2	MCF-7	breast:
38	chr12:49758090..49762166-chr12:49940541..49945539,5	K562	blood:
39	chr12:49933678..49936280-chr12:49946236..49948795,2	K562	blood:
40	chr12:49931420..49936579-chr12:49960006..49963071,6	MCF-7	breast:
41	chr12:49947021..49949486-chr12:49957820..49961447,4	K562	blood:
42	chr12:49947313..49947936-chr12:49973957..49974807,2	MCF-7	breast:
43	chr12:49946981..49947732-chr12:56984035..56984765,2	MCF-7	breast:
44	chr12:49936026..49937572-chr12:49942956..49945602,2	K562	blood:
45	chr12:49750635..49751535-chr12:49951399..49952213,2	MCF-7	breast:
46	chr12:49935009..49937186-chr12:49951821..49953735,2	K562	blood:
47	chr12:49752152..49753196-chr12:49947022..49947928,4	K562	blood:
48	chr12:49759022..49764027-chr12:49928293..49932911,8	MCF-7	breast:
49	chr12:49750823..49752635-chr12:49950607..49952469,2	MCF-7	breast:
50	chr12:49943317..49945018-chr12:49958797..49961139,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KCNH3-2	chr12:49931398-49931555	NONHSAT028109
2	lnc-KCNH3-2	chr12:49931669-49931973	NONHSAT028109
3	lnc-KCNH3-2	chr12:49932202-49932791	NONHSAT028109

No data

Variant related genes	Relation type
MCRS1	TF binding region
KCNH3	TF binding region
MCRS1	CpG island
KCNH3	CpG island
ENSG00000258101	chromatin interactions
ENSG00000258284	chromatin interactions
ENSG00000187778	chromatin interactions
ENSG00000199237	chromatin interactions
ENSG00000167548	chromatin interactions
ENSG00000178401	chromatin interactions
ENSG00000123352	chromatin interactions
ENSG00000167553	chromatin interactions
ENSG00000135519	chromatin interactions
ENSG00000110844	chromatin interactions

Extended variants
information (count: 1193 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:1193 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12296440	chr12:49927148-49927149	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs182241626	chr12:49927182-49927183	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs369691506	chr12:49927237-49927238	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs572555982	chr12:49927238-49927239	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs113795250	chr12:49927247-49927248	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs141499922	chr12:49927301-49927302	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs558319921	chr12:49927315-49927316	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs575380892	chr12:49927330-49927331	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs150483038	chr12:49927351-49927352	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs560994467	chr12:49927371-49927372	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs532775453	chr12:49927372-49927373	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs187574303	chr12:49927421-49927422	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs191848854	chr12:49927447-49927448	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs180877212	chr12:49927469-49927470	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs35716195	chr12:49927548-49927549	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs528594917	chr12:49927568-49927569	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs138312463	chr12:49927579-49927580	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs571797270	chr12:49927580-49927581	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs531040822	chr12:49927603-49927604	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs544979961	chr12:49927628-49927629	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs551169876	chr12:49927633-49927634	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs567822540	chr12:49927654-49927655	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs560319495	chr12:49927665-49927666	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs184898322	chr12:49927712-49927713	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs566169626	chr12:49927718-49927719	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs538328765	chr12:49927719-49927720	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs558256667	chr12:49927725-49927726	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs149195614	chr12:49927727-49927728	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs537612026	chr12:49927754-49927755	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs554761046	chr12:49927773-49927774	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs574600582	chr12:49927800-49927801	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs540582549	chr12:49927844-49927845	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs569734587	chr12:49927859-49927860	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs559775077	chr12:49927860-49927861	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs376399083	chr12:49927882-49927883	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs143332754	chr12:49927939-49927940	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs190296011	chr12:49927947-49927948	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs182490667	chr12:49927960-49927961	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs531043786	chr12:49927969-49927970	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs550848516	chr12:49927987-49927988	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs187485981	chr12:49927989-49927990	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs370783065	chr12:49928023-49928024	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs111529732	chr12:49928067-49928068	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs111580387	chr12:49928069-49928070	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs200466556	chr12:49928084-49928085	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs372000547	chr12:49928091-49928092	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs200120808	chr12:49928093-49928094	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs375364699	chr12:49928096-49928097	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs530317966	chr12:49928105-49928106	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs373864807	chr12:49928116-49928117	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Follicular lymphoma	20505157	CNVD
Hepatocellular carcinoma	16750200	CNVD
Melanoma	18172304	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	17661082	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Intracranial ependymoma	16609018	CNVD
Cancer	17160897	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1552 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:49888800-49927800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:49914400-49931400	Weak transcription	Pancreas	Pancrea
3	chr12:49916400-49931200	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr12:49916800-49927200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:49917600-49931200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr12:49920000-49928800	Weak transcription	Primary B cells from cord blood	blood
7	chr12:49920000-49931200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr12:49920200-49927400	Weak transcription	HepG2	liver
9	chr12:49920200-49928600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr12:49920200-49929600	Weak transcription	HMEC	breast
11	chr12:49920200-49931400	Weak transcription	Brain Anterior Caudate	brain
12	chr12:49920400-49929600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr12:49920400-49930000	Weak transcription	Brain Substantia Nigra	brain
14	chr12:49920600-49931200	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr12:49920600-49931400	Weak transcription	Spleen	Spleen
16	chr12:49920800-49929600	Weak transcription	Fetal Brain Female	brain
17	chr12:49921200-49929600	Weak transcription	Placenta	Placenta
18	chr12:49921400-49927200	Weak transcription	Rectal Mucosa Donor 29	rectum
19	chr12:49921800-49927200	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr12:49921800-49928200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr12:49921800-49928400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr12:49921800-49928600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr12:49921800-49928600	Weak transcription	Brain Germinal Matrix	brain
24	chr12:49921800-49928800	Weak transcription	Brain Hippocampus Middle	brain
25	chr12:49921800-49929600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr12:49921800-49930200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr12:49921800-49930800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr12:49921800-49931200	Weak transcription	Right Ventricle	heart
29	chr12:49922000-49927600	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr12:49922000-49928000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr12:49922000-49928600	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr12:49922000-49928600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr12:49922000-49928600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr12:49922000-49928600	Weak transcription	Fetal Intestine Large	intestine
35	chr12:49922000-49929600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr12:49922000-49929600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr12:49922000-49929600	Weak transcription	Lung	lung
38	chr12:49922000-49929600	Weak transcription	HSMM	muscle
39	chr12:49922000-49929600	Weak transcription	NH-A	brain
40	chr12:49922000-49929600	Weak transcription	Osteobl	bone
41	chr12:49922000-49929800	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr12:49922000-49929800	Weak transcription	NHEK	skin
43	chr12:49922000-49929800	Weak transcription	NHLF	lung
44	chr12:49922000-49930000	Weak transcription	Fetal Kidney	kidney
45	chr12:49922000-49931200	Weak transcription	HSMMtube	muscle
46	chr12:49922200-49927600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr12:49922400-49927400	Weak transcription	Fetal Stomach	stomach
48	chr12:49922400-49928200	Weak transcription	Fetal Lung	lung
49	chr12:49922600-49929800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr12:49922600-49930000	Weak transcription	GM12878-XiMat	blood

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