Variant report

Variant	nsv899196
Chromosome Location	chr12:63963445-64139771
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr12:64106394-64106647	GM12878	blood:	n/a	n/a
2	BATF	chr12:64106436-64106667	GM12878	blood:	n/a	n/a
3	BATF	chr12:64000417-64000676	GM12878	blood:	n/a	n/a
4	BATF	chr12:64000419-64000618	GM12878	blood:	n/a	n/a
5	BHLHE40	chr12:64062203-64062590	GM12878	blood:	n/a	chr12:64062378-64062391
6	BHLHE40	chr12:64062231-64062577	A549	lung:	n/a	chr12:64062378-64062391
7	BRCA1	chr12:63978333-63978494	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr12:64056829-64057086	A549	lung:	n/a	chr12:64056989-64057000
9	CEBPB	chr12:64037247-64037445	IMR90	lung:	n/a	n/a
10	CEBPB	chr12:64112080-64112114	Hela-S3	cervix:	n/a	chr12:64112093-64112106
11	CEBPB	chr12:63978276-63978475	Hela-S3	cervix:	n/a	n/a
12	CEBPB	chr12:64020552-64020778	MCF-7	breast:	n/a	n/a
13	CEBPB	chr12:64056875-64057025	Hela-S3	cervix:	n/a	chr12:64056989-64057000
14	CEBPB	chr12:64037188-64037554	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr12:64056902-64057024	K562	blood:	n/a	chr12:64056989-64057000
16	CEBPB	chr12:64056827-64057142	K562	blood:	n/a	chr12:64056989-64057000
17	CEBPB	chr12:64074503-64074713	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr12:64056829-64057077	IMR90	lung:	n/a	chr12:64056989-64057000
19	CEBPB	chr12:64056841-64057129	H1-hESC	embryonic stem cell:	n/a	chr12:64056989-64057000
20	CEBPB	chr12:64056822-64057106	K562	blood:	n/a	chr12:64056989-64057000
21	CEBPB	chr12:64056832-64057070	HepG2	liver:	n/a	chr12:64056989-64057000
22	CEBPD	chr12:64037519-64037921	K562	blood:	n/a	n/a
23	CHD2	chr12:64062070-64062344	H1-hESC	embryonic stem cell:	n/a	n/a
24	CREB1	chr12:64062224-64062592	A549	lung:	n/a	n/a
25	CTCF	chr12:64126720-64126796	ProgFib	skin:	n/a	n/a
26	CTCF	chr12:64066417-64066665	Spleen_OC	spleen:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
27	CTCF	chr12:64098081-64098115	MCF-7	breast:	n/a	n/a
28	CTCF	chr12:64066490-64066597	GM13976	blood:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
29	CTCF	chr12:64069142-64069249	GM10248	blood:	n/a	n/a
30	CTCF	chr12:64132501-64132565	Spleen_OC	spleen:	n/a	n/a
31	CTCF	chr12:64066180-64066330	RPTEC	kidney:	n/a	n/a
32	CTCF	chr12:64116405-64116484	LNCaP	prostate:	n/a	n/a
33	CTCF	chr12:64066420-64066570	HL-60	blood:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
34	CTCF	chr12:64066236-64066690	A549	lung:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
35	CTCF	chr12:64066220-64066370	HEEpiC	esophagus:	n/a	n/a
36	CTCF	chr12:64066246-64066780	A549	lung:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
37	CTCF	chr12:64037457-64037530	GM13977	blood:	n/a	n/a
38	CTCF	chr12:64068528-64068580	GM10248	blood:	n/a	n/a
39	CTCF	chr12:64066440-64066590	NHDF-neo	bronchial:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
40	CTCF	chr12:64066440-64066590	HPAF	blood vessel:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
41	CTCF	chr12:64066459-64066608	Lung_OC	lung:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
42	CTCF	chr12:64118215-64118243	GM20000	blood:	n/a	n/a
43	CTCF	chr12:63998913-63998941	LNCaP	prostate:	n/a	n/a
44	CTCF	chr12:64066182-64066269	GM13977	blood:	n/a	n/a
45	CTCF	chr12:64066414-64066627	Kidney_OC	kidney:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
46	CTCF	chr12:64061800-64061950	HBMEC	blood vessel:	n/a	n/a
47	CTCF	chr12:63966265-63966385	MCF-7	breast:	n/a	n/a
48	CTCF	chr12:64066420-64066570	HRE	kidney:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
49	CTCF	chr12:64066450-64066570	GM20000	blood:	n/a	chr12:64066529-64066550 chr12:64066528-64066544 chr12:64066527-64066545
50	CTCF	chr12:64041876-64041933	Medullo	brain:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:64062384-64062434	SAEC	small airway:	n/a
2	chr12:64062505-64062555	AG10803	skin:	n/a
3	chr12:64062384-64062434	SAEC	small airway:	n/a
4	chr12:64062505-64062555	AG10803	skin:	n/a
5	chr12:64062542-64062592	GM12891	blood:	n/a
6	chr12:64062221-64062271	GM12891	blood:	n/a
7	chr12:64080144-64080194	HRPEpiC	eye:	n/a
8	chr12:64080144-64080194	HCT-116	colon:	n/a
9	chr12:64062542-64062592	HCT-116	colon:	n/a
10	chr12:64062724-64062774	SK-N-MC	brain:	n/a
11	chr12:64062505-64062555	ProgFib	skin:	n/a
12	chr12:64080622-64080672	GM12878	blood:	n/a
13	chr12:64062526-64062576	GM06990	blood:	n/a
14	chr12:64062724-64062774	SKMC	muscle:	n/a
15	chr12:64062542-64062592	MCF10A-Er-Src	breast:	n/a
16	chr12:64062544-64062594	HRCEpiC	kidney:	n/a
17	chr12:64062542-64062592	AG10803	skin:	n/a
18	chr12:64062724-64062774	BE2_C	brain:	n/a
19	chr12:64080622-64080672	HMEC	breast:	n/a
20	chr12:64062564-64062614	MCF-7	breast:	n/a
21	chr12:64062384-64062434	AoSMC	blood vessel:	n/a
22	chr12:64062505-64062555	AG04449	skin:	fetal
23	chr12:64062384-64062434	NT2-D1	testis:	n/a
24	chr12:64062564-64062614	GM06990	blood:	n/a
25	chr12:64080144-64080194	HUVEC	blood vessel:	n/a
26	chr12:64062221-64062271	PFSK-1	brain:	n/a
27	chr12:64080144-64080194	ovcar-3	ovarian:	n/a
28	chr12:64080144-64080194	NHBE	bronchial:	n/a
29	chr12:63998373-63998423	SAEC	small airway:	n/a
30	chr12:64062724-64062774	H1-hESC	embryonic stem cell:	embryo
31	chr12:64062544-64062594	A549	lung:	n/a
32	chr12:64062505-64062555	SK-N-SH_RA	brain:	n/a
33	chr12:64080622-64080672	SK-N-SH_RA	brain:	n/a
34	chr12:64062526-64062576	Hepatocyte	liver:	n/a
35	chr12:64062544-64062594	IMR90	lung:	fetal
36	chr12:64062526-64062576	PrEC	prostate:	n/a
37	chr12:64062564-64062614	SAEC	small airway:	n/a
38	chr12:64080144-64080194	HRE	kidney:	n/a
39	chr12:64062542-64062592	HRE	kidney:	n/a
40	chr12:64062498-64062548	NHBE	bronchial:	n/a
41	chr12:64062498-64062548	GM19239	blood:	n/a
42	chr12:64062542-64062592	AG04450	lung:	fetal
43	chr12:64062544-64062594	LNCaP	prostate:	n/a
44	chr12:63998373-63998423	T-47D	breast:	n/a
45	chr12:64062564-64062614	AoSMC	blood vessel:	n/a
46	chr12:64080144-64080194	AG09309	skin:	n/a
47	chr12:64062221-64062271	HCT-116	colon:	n/a
48	chr12:64062221-64062271	AoSMC	blood vessel:	n/a
49	chr12:64080144-64080194	Jurkat	blood:	n/a
50	chr12:64080622-64080672	T-47D	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:64130174..64132619-chr12:64170875..64173477,2	MCF-7	breast:
2	chr12:64116942..64118463-chr7:35277697..35279270,2	MCF-7	breast:
3	chr12:63978668..63979594-chr20:52240028..52240873,2	MCF-7	breast:
4	chr12:64088585..64090481-chr12:64171623..64173907,2	MCF-7	breast:
5	chr12:64105781..64108214-chr12:64111007..64113844,2	K562	blood:
6	chr12:64105781..64108214-chr12:64111007..64113844,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DPY19L2-1	chr12:64017568-64017604	ENSG00000249753.2

Variant related genes	Relation type
ENSG00000255583	TF binding region
DPY19L2	TF binding region
ENSG00000257005	TF binding region
ENSG00000255583	CpG island
DPY19L2	CpG island
ENSG00000257005	CpG island
ENSG00000118600	chromatin interactions

Extended variants
information (count: 4972 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:4972 , 50 per page) page: 1 2 3 4 5 6 7 ... 100

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2909169	chr12:63963445-63963446	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs575448057	chr12:63963490-63963491	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs543828496	chr12:63963554-63963555	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs563518774	chr12:63963573-63963574	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs189908207	chr12:63963593-63963594	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs2971473	chr12:63963608-63963609	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs148398888	chr12:63963616-63963617	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs183205556	chr12:63963629-63963630	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs528707985	chr12:63963635-63963636	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs61935045	chr12:63963649-63963650	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs150957059	chr12:63963664-63963665	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs531087702	chr12:63963769-63963770	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs550582886	chr12:63963780-63963781	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs2659978	chr12:63963810-63963811	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs187892685	chr12:63963820-63963821	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs576168527	chr12:63963847-63963848	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs2659979	chr12:63963850-63963851	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs2659980	chr12:63963919-63963920	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs193068308	chr12:63963924-63963925	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs3864440	chr12:63963975-63963976	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs144736766	chr12:63964002-63964003	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs555250174	chr12:63964019-63964020	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs575530034	chr12:63964038-63964039	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12321071	chr12:63964041-63964042	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs558006076	chr12:63964067-63964068	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs577316375	chr12:63964161-63964162	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs2942678	chr12:63964167-63964168	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs546180443	chr12:63964172-63964173	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs559928344	chr12:63964175-63964176	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs373738644	chr12:63964202-63964203	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs11175048	chr12:63964258-63964259	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs370852053	chr12:63964284-63964285	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs375585593	chr12:63964322-63964323	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs11175049	chr12:63964329-63964330	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs11175050	chr12:63964380-63964381	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs145006198	chr12:63964382-63964383	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs562124427	chr12:63964384-63964385	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs370041398	chr12:63964390-63964391	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs183321091	chr12:63964403-63964404	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200702103	chr12:63964428-63964429	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs397850204	chr12:63964431-63964432	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs551012366	chr12:63964437-63964438	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs564390464	chr12:63964451-63964452	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs532772375	chr12:63964459-63964460	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs71086685	chr12:63964463-63964464	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs116847347	chr12:63964476-63964477	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs566259892	chr12:63964482-63964483	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377198758	chr12:63964508-63964509	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs138738493	chr12:63964514-63964515	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs549028608	chr12:63964572-63964573	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21390271	CNVD
Cancer	20164919	CNVD
Leukemia	18628472	CNVD
Phyllodes tumor	17334353	CNVD
Glaucoma	21310917	CNVD
Breast cancer	16272173	CNVD
Mental retardation	19951919	CNVD
Glaucoma	21447600	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Developmental delay	21267005	CNVD
12q14 microdeletion syndrome	21267005	CNVD
Developmental delay	19277063	CNVD
Dwarfism	19277063	CNVD
Fibroblasts	20926602	CNVD
Metanephric adenoma	20802469	CNVD
Follicular lymphoma	18703704	CNVD
Acute myeloid leukemia	21251322	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	16773561	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Mental retardation	17220210	CNVD
Osteopoikilosis	17220210	CNVD
short stature	17220210	CNVD
Burkitt''s lymphoma	20823134	CNVD
Breast cancer	21364760	CNVD
abnormal development	18461090	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Heart disease	21282601	CNVD
Ovarian neoplasms	16753589	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	16620391	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:468 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63943800-63969400	Weak transcription	Fetal Heart	heart
2	chr12:63960000-63969200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr12:63960200-63964200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr12:63960200-63971200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr12:63960800-63967200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr12:63962000-64027800	Weak transcription	Ovary	ovary
7	chr12:63962600-63964200	Weak transcription	Left Ventricle	heart
8	chr12:63964200-63964600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr12:63964200-63965400	Strong transcription	Left Ventricle	heart
10	chr12:63964600-63965200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr12:63964800-63967200	Weak transcription	Pancreas	Pancrea
12	chr12:63965200-63971200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr12:63965400-63998800	Weak transcription	Left Ventricle	heart
14	chr12:63967200-63967800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr12:63967800-63971200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr12:63968600-63969000	Enhancers	Dnd41	blood
17	chr12:63971200-63971600	Enhancers	Primary hematopoietic stem cells short term culture	blood
18	chr12:63971200-63971800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr12:63971200-63972000	Enhancers	Primary hematopoietic stem cells	blood
20	chr12:63971200-63972000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr12:63971800-63989200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr12:63972000-63988400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr12:63986200-63999200	Weak transcription	Fetal Heart	heart
24	chr12:63988200-63988600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr12:63988400-63989600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr12:63989600-63990400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr12:63990400-63990800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr12:63990800-63997200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr12:63997200-63997800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr12:63997800-64012400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr12:63998800-63999200	Enhancers	Left Ventricle	heart
32	chr12:63999000-63999200	Enhancers	Colon Smooth Muscle	Colon
33	chr12:63999200-63999400	Enhancers	Fetal Heart	heart
34	chr12:63999200-64008600	Weak transcription	Left Ventricle	heart
35	chr12:63999400-63999600	Weak transcription	Fetal Heart	heart
36	chr12:64008200-64009000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr12:64008600-64008800	Enhancers	Left Ventricle	heart
38	chr12:64008600-64009000	Enhancers	NHDF-Ad	bronchial
39	chr12:64008800-64009400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr12:64009000-64009800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr12:64009800-64010000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr12:64012400-64012800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr12:64012800-64027400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr12:64019400-64059000	Weak transcription	Left Ventricle	heart
45	chr12:64020200-64022600	Weak transcription	Right Ventricle	heart
46	chr12:64021800-64022400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
47	chr12:64022400-64027800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr12:64027400-64031000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr12:64027600-64037400	Weak transcription	Fetal Heart	heart
50	chr12:64027800-64028600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links