Variant report

Variant	nsv899561
Chromosome Location	chr12:121376416-121525591
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4048)
CpG islands
(count:2933)
Chromatin interactive
region (count:138)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:4048 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:121399918-121400154	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:121416006-121416515	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:121523699-121523880	HepG2	liver:	n/a	n/a
4	ARID3A	chr12:121443216-121443451	K562	blood:	n/a	n/a
5	ARID3A	chr12:121432640-121432909	HepG2	liver:	n/a	n/a
6	ARID3A	chr12:121410742-121410940	HepG2	liver:	n/a	n/a
7	ARID3A	chr12:121379851-121379968	HepG2	liver:	n/a	n/a
8	ARID3A	chr12:121497991-121498204	HepG2	liver:	n/a	n/a
9	ARID3A	chr12:121418090-121418322	HepG2	liver:	n/a	n/a
10	ARID3A	chr12:121455416-121455815	HepG2	liver:	n/a	n/a
11	ARID3A	chr12:121443210-121443412	HepG2	liver:	n/a	n/a
12	ARID3A	chr12:121463440-121464449	HepG2	liver:	n/a	n/a
13	ARID3A	chr12:121415630-121415655	K562	blood:	n/a	n/a
14	ARID3A	chr12:121454126-121454492	HepG2	liver:	n/a	n/a
15	ARID3A	chr12:121397714-121398030	HepG2	liver:	n/a	n/a
16	ATF1	chr12:121409535-121409969	K562	blood:	n/a	n/a
17	ATF1	chr12:121454106-121454550	K562	blood:	n/a	n/a
18	ATF1	chr12:121480947-121481240	K562	blood:	n/a	n/a
19	ATF1	chr12:121456015-121456311	K562	blood:	n/a	n/a
20	ATF2	chr12:121454059-121454576	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr12:121476753-121477249	GM12878	blood:	n/a	n/a
22	ATF2	chr12:121454087-121454511	GM12878	blood:	n/a	n/a
23	ATF2	chr12:121454054-121454531	GM12878	blood:	n/a	n/a
24	ATF2	chr12:121397652-121398080	GM12878	blood:	n/a	n/a
25	ATF2	chr12:121397536-121398098	GM12878	blood:	n/a	n/a
26	ATF3	chr12:121378630-121378970	K562	blood:	n/a	n/a
27	ATF3	chr12:121419340-121419824	A549	lung:	n/a	n/a
28	ATF3	chr12:121382379-121382738	K562	blood:	n/a	n/a
29	ATF3	chr12:121488586-121488835	GM12878	blood:	n/a	n/a
30	ATF3	chr12:121454171-121454453	K562	blood:	n/a	chr12:121454331-121454339 chr12:121454330-121454343 chr12:121454330-121454341 chr12:121454332-121454339 chr12:121454329-121454339 chr12:121454336-121454345 chr12:121454332-121454342 chr12:121454330-121454341 chr12:121454328-121454343 chr12:121454332-121454340
31	ATF3	chr12:121454074-121454461	H1-hESC	embryonic stem cell:	n/a	chr12:121454331-121454339 chr12:121454330-121454343 chr12:121454330-121454341 chr12:121454332-121454339 chr12:121454329-121454339 chr12:121454336-121454345 chr12:121454332-121454342 chr12:121454330-121454341 chr12:121454328-121454343 chr12:121454332-121454340
32	ATF3	chr12:121523628-121523846	HepG2	liver:	n/a	n/a
33	ATF3	chr12:121397614-121398071	K562	blood:	n/a	n/a
34	ATF3	chr12:121484435-121484678	K562	blood:	n/a	n/a
35	BATF	chr12:121397735-121398033	GM12878	blood:	n/a	n/a
36	BATF	chr12:121397586-121398075	GM12878	blood:	n/a	n/a
37	BATF	chr12:121382360-121382707	GM12878	blood:	n/a	n/a
38	BATF	chr12:121382472-121382762	GM12878	blood:	n/a	n/a
39	BCL11A	chr12:121397660-121398121	GM12878	blood:	n/a	n/a
40	BCL3	chr12:121470923-121471217	GM12878	blood:	n/a	n/a
41	BCL3	chr12:121418508-121419849	A549	lung:	n/a	chr12:121418966-121418975 chr12:121418656-121418665
42	BCL3	chr12:121415555-121416577	A549	lung:	n/a	n/a
43	BCL3	chr12:121403477-121403985	A549	lung:	n/a	n/a
44	BCL3	chr12:121436417-121436765	A549	lung:	n/a	n/a
45	BCL3	chr12:121443023-121443599	A549	lung:	n/a	n/a
46	BCL3	chr12:121418529-121419864	A549	lung:	n/a	chr12:121418966-121418975 chr12:121418656-121418665
47	BCL3	chr12:121471028-121471342	GM12878	blood:	n/a	n/a
48	BCL3	chr12:121403383-121404169	A549	lung:	n/a	n/a
49	BCL3	chr12:121417821-121418430	A549	lung:	n/a	chr12:121417844-121417852 chr12:121418147-121418156
50	BCLAF1	chr12:121397609-121398156	GM12878	blood:	n/a	n/a

(count:2933 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:121476792-121476842	HNPCEpiC	eye:	n/a
2	chr12:121455706-121455756	HRPEpiC	eye:	n/a
3	chr12:121416501-121416551	A549	lung:	n/a
4	chr12:121513978-121514028	PANC-1	pancreas:	n/a
5	chr12:121454288-121454338	SK-N-SH_RA	brain:	n/a
6	chr12:121476792-121476842	HNPCEpiC	eye:	n/a
7	chr12:121455706-121455756	HRPEpiC	eye:	n/a
8	chr12:121416501-121416551	A549	lung:	n/a
9	chr12:121513978-121514028	PANC-1	pancreas:	n/a
10	chr12:121454288-121454338	SK-N-SH_RA	brain:	n/a
11	chr12:121455706-121455756	HL-60	blood:	n/a
12	chr12:121454133-121454183	IMR90	lung:	fetal
13	chr12:121450381-121450431	AG09319	gingival:	n/a
14	chr12:121454335-121454385	LNCaP	prostate:	n/a
15	chr12:121477061-121477111	IMR90	lung:	fetal
16	chr12:121411269-121411319	HAEpiC	amniotic membrane:	n/a
17	chr12:121427010-121427060	HRCEpiC	kidney:	n/a
18	chr12:121441714-121441764	AoSMC	blood vessel:	n/a
19	chr12:121443309-121443359	PrEC	prostate:	n/a
20	chr12:121416315-121416365	MCF-7	breast:	n/a
21	chr12:121454133-121454183	AG09319	gingival:	n/a
22	chr12:121427010-121427060	BJ	skin:	n/a
23	chr12:121417986-121418036	HCF	heart:	n/a
24	chr12:121441714-121441764	NHBE	bronchial:	n/a
25	chr12:121454133-121454183	MCF-7	breast:	n/a
26	chr12:121454837-121454887	PANC-1	pancreas:	n/a
27	chr12:121477093-121477143	HEK293	kidney:	embryo
28	chr12:121455706-121455756	BE2_C	brain:	n/a
29	chr12:121443309-121443359	AG09319	gingival:	n/a
30	chr12:121477061-121477111	MCF-7	breast:	n/a
31	chr12:121454356-121454406	GM12892	blood:	n/a
32	chr12:121454837-121454887	SK-N-SH	brain:	n/a
33	chr12:121404798-121404848	Hela-S3	cervix:	n/a
34	chr12:121409673-121409723	NHDF-neo	bronchial:	n/a
35	chr12:121476596-121476646	GM12878	blood:	n/a
36	chr12:121411269-121411319	GM12892	blood:	n/a
37	chr12:121416315-121416365	A549	lung:	n/a
38	chr12:121416612-121416662	NH-A	brain:	n/a
39	chr12:121454288-121454338	HCM	heart:	n/a
40	chr12:121415499-121415549	LNCaP	prostate:	n/a
41	chr12:121404868-121404918	SK-N-SH_RA	brain:	n/a
42	chr12:121454451-121454501	K562	blood:	n/a
43	chr12:121498343-121498393	SK-N-SH_RA	brain:	n/a
44	chr12:121476792-121476842	Hela-S3	cervix:	n/a
45	chr12:121455706-121455756	ovcar-3	ovarian:	n/a
46	chr12:121476596-121476646	Hepatocyte	liver:	n/a
47	chr12:121416501-121416551	HRPEpiC	eye:	n/a
48	chr12:121454451-121454501	HPAEpiC	pulmonary alveolar:	n/a
49	chr12:121404850-121404900	RPTEC	kidney:	n/a
50	chr12:121498343-121498393	SK-N-MC	brain:	n/a

(count:138 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr12:121463705..121464632-chr12:121497652..121498532,2	MCF-7	breast:
2	chr12:121488415..121490899-chr12:121492548..121494191,2	K562	blood:
3	chr12:121017782..121019527-chr12:121520951..121522619,2	MCF-7	breast:
4	chr12:121401463..121403474-chr12:121406949..121408762,2	K562	blood:
5	chr12:121453006..121455814-chr12:121464370..121466232,2	K562	blood:
6	chr12:121455739..121458547-chr12:121462154..121463997,2	MCF-7	breast:
7	chr12:121509410..121511926-chr12:121521670..121523636,2	K562	blood:
8	chr12:121444400..121446365-chr12:121447661..121449624,2	K562	blood:
9	chr12:121498108..121499039-chr12:121533443..121534521,4	MCF-7	breast:
10	chr12:121445828..121450860-chr12:121451549..121454387,9	K562	blood:
11	chr12:121525545..121528351-chr12:121648009..121649745,2	MCF-7	breast:
12	chr12:121409514..121410021-chr12:121548070..121548945,2	K562	blood:
13	chr12:121197854..121198510-chr12:121441406..121442179,2	MCF-7	breast:
14	chr12:121502918..121505798-chr12:121509128..121510948,2	K562	blood:
15	chr12:121471397..121473334-chr12:121474789..121478157,3	MCF-7	breast:
16	chr12:121447305..121448170-chr12:121547918..121548565,2	MCF-7	breast:
17	chr12:121382080..121382983-chr12:121409442..121410205,3	K562	blood:
18	chr12:121124381..121127314-chr12:121441274..121443258,2	K562	blood:
19	chr12:121488415..121490899-chr12:121492548..121494191,2	K562	blood:
20	chr12:121426408..121429065-chr12:121429959..121431966,2	MCF-7	breast:
21	chr12:121454608..121456254-chr12:121460515..121463475,3	K562	blood:
22	chr12:121443137..121445900-chr12:121447661..121451218,5	K562	blood:
23	chr12:121523299..121524824-chr12:121646920..121648679,2	MCF-7	breast:
24	chr12:121490675..121493658-chr12:121495456..121497011,2	K562	blood:
25	chr12:121398625..121400416-chr12:121405425..121406992,2	K562	blood:
26	chr12:121417392..121420035-chr12:121422545..121425552,3	K562	blood:
27	chr12:120966137..120967701-chr12:121394938..121396488,2	MCF-7	breast:
28	chr12:121419295..121421296-chr12:121428164..121430442,2	MCF-7	breast:
29	chr12:121429573..121435133-chr12:121436242..121441204,7	K562	blood:
30	chr12:121403725..121406245-chr12:121406756..121408586,2	MCF-7	breast:
31	chr12:121495209..121497796-chr12:121499977..121502641,3	K562	blood:
32	chr12:121401463..121403474-chr12:121406949..121408762,2	K562	blood:
33	chr12:121429573..121435133-chr12:121436242..121441204,7	K562	blood:
34	chr12:121412159..121414001-chr12:121420552..121422609,2	MCF-7	breast:
35	chr12:121419406..121422092-chr12:121422475..121425429,2	K562	blood:
36	chr12:121488470..121488989-chr3:111085239..111085759,2	MCF-7	breast:
37	chr12:121340572..121343086-chr12:121393518..121396194,2	MCF-7	breast:
38	chr12:121473524..121476101-chr12:121524769..121527497,2	K562	blood:
39	chr12:121490675..121493658-chr12:121495456..121497011,2	K562	blood:
40	chr12:121498058..121498974-chr12:121533466..121534380,2	K562	blood:
41	chr12:121462116..121464172-chr12:121497468..121500006,2	MCF-7	breast:
42	chr12:121445828..121450860-chr12:121451549..121454387,9	K562	blood:
43	chr12:121463340..121465773-chr12:121472717..121474961,3	MCF-7	breast:
44	chr12:121382478..121383151-chr12:121441198..121441773,2	MCF-7	breast:
45	chr12:121498251..121499029-chr12:121533532..121534500,2	MCF-7	breast:
46	chr12:121017466..121019085-chr12:121449555..121451669,2	MCF-7	breast:
47	chr12:121175837..121176393-chr12:121409274..121410074,2	MCF-7	breast:
48	chr12:121388948..121393139-chr12:121395354..121400145,4	K562	blood:
49	chr12:121443137..121445900-chr12:121447661..121451218,5	K562	blood:
50	chr12:121174261..121175937-chr12:121403993..121406712,2	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C12orf43-1	chr12:121418447-121418768	ENSG00000241388.2
2	lnc-C12orf43-1	chr12:121405937-121406811	NONHSAT031257
3	lnc-C12orf43-1	chr12:121410457-121412502	NONHSAT031257
4	lnc-C12orf43-1	chr12:121414602-121414724	ENSG00000241388.2
5	lnc-C12orf43-1	chr12:121417417-121417550	ENSG00000241388.2
6	lnc-C12orf43-1	chr12:121407933-121408173	ENSG00000241388.2
7	lnc-C12orf43-3	chr12:121438289-121439071	ENSG00000271769.1
8	lnc-C12orf43-1	chr12:121407641-121410095	ENSG00000241388.2
9	lnc-C12orf43-1	chr12:121412188-121412401	ENSG00000241388.2
10	lnc-C12orf43-1	chr12:121418447-121418709	ENSG00000241388.2
11	lnc-C12orf43-1	chr12:121412288-121412401	ENSG00000241388.2
12	lnc-C12orf43-1	chr12:121406416-121406811	ENSG00000241388.2
13	lnc-P2RX7-6	chr12:121517645-121517927	NONHSAT031263
14	lnc-C12orf43-1	chr12:121408046-121410443	NONHSAT031257

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	HNF1A	hsa-miR-320a	chr12:121439680-121439702

Variant related genes	Relation type
ENSG00000271769	TF binding region
HNF1A-AS1	TF binding region
C12orf43	TF binding region
OASL	TF binding region
ENSG00000272214	TF binding region
HNF1A	TF binding region
ENSG00000256963	TF binding region
ENSG00000271769	CpG island
HNF1A-AS1	CpG island
C12orf43	CpG island
OASL	CpG island
ENSG00000272214	CpG island
HNF1A	CpG island
ENSG00000256963	CpG island
ENSG00000256569	chromatin interactions
ENSG00000256008	chromatin interactions
ENSG00000256963	chromatin interactions
ENSG00000157837	chromatin interactions
ENSG00000202538	chromatin interactions
ENSG00000110871	chromatin interactions
ENSG00000265455	chromatin interactions
ENSG00000241388	chromatin interactions
ENSG00000271769	chromatin interactions
ENSG00000167272	chromatin interactions
ENSG00000135097	chromatin interactions
ENSG00000135100	chromatin interactions
ENSG00000200795	chromatin interactions
ENSG00000157895	chromatin interactions
ENSG00000135114	chromatin interactions
ENSG00000135124	chromatin interactions
ENSG00000110917	chromatin interactions
ENSG00000272214	chromatin interactions
ENSG00000175970	chromatin interactions
ENSG00000157782	chromatin interactions

Extended variants
information (count: 6170 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:6170 , 50 per page) page: 1 2 3 4 5 6 7 ... 124

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1186380	chr12:121376416-121376417	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs544219171	chr12:121376531-121376532	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs557681817	chr12:121376638-121376639	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs140202929	chr12:121376651-121376652	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs188631234	chr12:121376667-121376668	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs377103563	chr12:121376672-121376673	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs540508356	chr12:121376714-121376715	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs574819080	chr12:121376743-121376744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs560133033	chr12:121376749-121376750	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs529065909	chr12:121376771-121376772	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs540697143	chr12:121376806-121376807	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs149640834	chr12:121376809-121376810	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs375371363	chr12:121376826-121376827	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs560582182	chr12:121376894-121376895	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs577470912	chr12:121376994-121376995	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs192801505	chr12:121377013-121377014	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs183188850	chr12:121377057-121377058	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs146139730	chr12:121377087-121377088	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs187717914	chr12:121377124-121377125	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs11835269	chr12:121377143-121377144	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs555368593	chr12:121377185-121377186	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs11065353	chr12:121377210-121377211	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs555511910	chr12:121377246-121377247	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs569010909	chr12:121377315-121377316	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs10849821	chr12:121377329-121377330	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs140136377	chr12:121377352-121377353	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs566162492	chr12:121377362-121377363	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs561751146	chr12:121377383-121377384	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs111638450	chr12:121377398-121377399	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs540188501	chr12:121377471-121377472	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs10849822	chr12:121377494-121377495	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs547050340	chr12:121377551-121377552	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs78197988	chr12:121377567-121377568	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs542867742	chr12:121377606-121377607	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs539247143	chr12:121377642-121377643	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs7969196	chr12:121377656-121377657	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs531445331	chr12:121377660-121377661	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs191491852	chr12:121377704-121377705	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs370169813	chr12:121377785-121377786	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs199813892	chr12:121377846-121377847	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs367937719	chr12:121377847-121377848	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs564919879	chr12:121377860-121377861	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs527343073	chr12:121377874-121377875	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs527263459	chr12:121377899-121377900	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs374583644	chr12:121377908-121377909	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs534847496	chr12:121377929-121377930	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs553892112	chr12:121377962-121377963	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs547043337	chr12:121377980-121377981	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs560861334	chr12:121378036-121378037	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs535771408	chr12:121378046-121378047	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21390271	CNVD
Cancer	20164919	CNVD
Cancer	16751803	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Wilms tumour	21544195	CNVD
Ovarian cancer	21720365	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Breast cancer	16397240	CNVD
Breast cancer	17133270	CNVD
Breast cancer	17603634	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Schizophrenia	18923514	CNVD
Schizophrenia	22241247	CNVD
Cryptorchidism	21048976	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Neuroblastoma	18923191	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21806811	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Urothelial carcinoma	21177765	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Beckwith-Wiedemann syndrome	20648245	CNVD
Developmental delay	21457577	CNVD
dysmorphic	21457577	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Olfactory neuroblastoma	18408657	CNVD
Chordoma	18071362	CNVD
Breast cancer	21509527	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Intracranial arachnoid cysts	20187927	CNVD

Chromatin state (count:2540 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121367400-121394400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:121371200-121380200	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr12:121374000-121379000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr12:121375200-121377600	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr12:121375400-121377600	Weak transcription	Adipose Nuclei	Adipose
6	chr12:121375600-121376800	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr12:121375600-121382600	Weak transcription	Fetal Intestine Small	intestine
8	chr12:121375800-121376600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr12:121375800-121377400	Weak transcription	HepG2	liver
10	chr12:121376000-121376800	Enhancers	Placenta Amnion	Placenta Amnion
11	chr12:121376200-121378000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr12:121376600-121377800	Enhancers	Primary hematopoietic stem cells	blood
13	chr12:121376600-121379800	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr12:121376800-121378000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr12:121376800-121378400	Enhancers	Primary neutrophils fromperipheralblood	blood
16	chr12:121377200-121378000	Enhancers	Fetal Thymus	thymus
17	chr12:121377400-121380400	Enhancers	HepG2	liver
18	chr12:121377600-121378000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
19	chr12:121377600-121378200	Enhancers	Adipose Nuclei	Adipose
20	chr12:121378000-121380200	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr12:121378000-121383000	Weak transcription	Fetal Thymus	thymus
22	chr12:121378800-121379200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr12:121379000-121379200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
24	chr12:121379000-121379200	Enhancers	K562	blood
25	chr12:121379200-121394800	Weak transcription	K562	blood
26	chr12:121380200-121382600	Weak transcription	Monocytes-CD14+_RO01746	blood
27	chr12:121380400-121382600	Weak transcription	HepG2	liver
28	chr12:121382600-121382800	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr12:121382600-121382800	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr12:121382600-121382800	Enhancers	Liver	Liver
31	chr12:121382600-121382800	Enhancers	Fetal Intestine Small	intestine
32	chr12:121382600-121382800	Enhancers	Hela-S3	cervix
33	chr12:121382600-121382800	Enhancers	HepG2	liver
34	chr12:121382600-121382800	Enhancers	Monocytes-CD14+_RO01746	blood
35	chr12:121382600-121383000	Active TSS	Placenta	Placenta
36	chr12:121382800-121383600	Weak transcription	Fetal Intestine Small	intestine
37	chr12:121382800-121385000	Weak transcription	HepG2	liver
38	chr12:121383000-121383200	Enhancers	Fetal Thymus	thymus
39	chr12:121383200-121383800	Weak transcription	Fetal Thymus	thymus
40	chr12:121383800-121384000	Enhancers	Fetal Thymus	thymus
41	chr12:121385000-121385800	Enhancers	HepG2	liver
42	chr12:121389200-121393600	Weak transcription	Fetal Intestine Large	intestine
43	chr12:121389600-121392800	Weak transcription	Fetal Intestine Small	intestine
44	chr12:121391800-121392000	Enhancers	Colonic Mucosa	Colon
45	chr12:121391800-121392000	Enhancers	Rectal Mucosa Donor 29	rectum
46	chr12:121392000-121393800	Weak transcription	Duodenum Mucosa	Duodenum
47	chr12:121392600-121393000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr12:121392600-121393000	Enhancers	NHEK	skin
49	chr12:121392600-121393200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr12:121392800-121393200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links