Variant report

Variant nsv900252
Chromosome Location chr13:62502166-62687843
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:62502000-62502400 Flanking Active TSS HUVEC blood vessel
2 chr13:62510000-62510400 Enhancers GM12878-XiMat blood
3 chr13:62524200-62524600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
4 chr13:62547200-62548400 Enhancers iPS-15b Cell Line embryonic stem cell
5 chr13:62547400-62548200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr13:62547800-62548200 Enhancers iPS-18 Cell Line embryonic stem cell
7 chr13:62549200-62550000 Enhancers Fetal Lung lung
8 chr13:62562800-62563200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr13:62578400-62578600 Enhancers Pancreas Pancrea
10 chr13:62585400-62585800 Enhancers Fetal Heart heart
11 chr13:62588400-62588600 Enhancers Pancreatic Islets Pancreatic Islet
12 chr13:62588600-62588800 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr13:62588600-62589000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr13:62588600-62589000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr13:62588600-62589000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
16 chr13:62588600-62589000 Active TSS Adipose Nuclei Adipose
17 chr13:62588600-62589000 Active TSS Brain Angular Gyrus brain
18 chr13:62588600-62589000 Active TSS Brain Anterior Caudate brain
19 chr13:62588600-62589000 Active TSS Brain Cingulate Gyrus brain
20 chr13:62588600-62589000 Active TSS Brain Hippocampus Middle brain
21 chr13:62588600-62589000 Active TSS Brain Inferior Temporal Lobe brain
22 chr13:62588600-62589000 Active TSS Brain Substantia Nigra brain
23 chr13:62588600-62589000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
24 chr13:62588600-62589000 Active TSS Fetal Lung lung
25 chr13:62588600-62589000 Active TSS Fetal Muscle Leg muscle
26 chr13:62588600-62589000 Active TSS Fetal Stomach stomach
27 chr13:62588600-62589000 Active TSS Psoas Muscle Psoas
28 chr13:62588600-62589000 Active TSS A549 lung
29 chr13:62588600-62589000 Active TSS Hela-S3 cervix
30 chr13:62594600-62595400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr13:62603400-62603800 Enhancers Brain Anterior Caudate brain
32 chr13:62603600-62604000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr13:62604000-62606400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr13:62605200-62605800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr13:62605200-62605800 Enhancers Cortex derived primary cultured neurospheres brain
36 chr13:62605600-62606000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr13:62605600-62606000 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr13:62605800-62607800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr13:62606000-62607400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr13:62607400-62607800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr13:62607800-62608200 Enhancers Brain Hippocampus Middle brain
42 chr13:62607800-62608400 Enhancers Cortex derived primary cultured neurospheres brain
43 chr13:62608200-62608600 Active TSS Brain Hippocampus Middle brain
44 chr13:62612200-62612800 Enhancers GM12878-XiMat blood
45 chr13:62620400-62621200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
46 chr13:62620600-62621200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
47 chr13:62621200-62626600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr13:62625600-62626200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr13:62639000-62639800 Enhancers Fetal Lung lung
50 chr13:62642400-62643000 Active TSS Fetal Kidney kidney

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