Variant report

Variant	nsv900369
Chromosome Location	chr13:65423068-65577032
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr13:65503121-65503331	GM12878	blood:	n/a	n/a
2	BCL11A	chr13:65512859-65513178	GM12878	blood:	n/a	n/a
3	BCL11A	chr13:65512818-65513084	GM12878	blood:	n/a	n/a
4	BHLHE40	chr13:65512810-65513130	GM12878	blood:	n/a	n/a
5	CEBPB	chr13:65549486-65549834	IMR90	lung:	n/a	chr13:65549674-65549685 chr13:65549616-65549627
6	CEBPB	chr13:65503090-65503733	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr13:65423316-65423630	H1-hESC	embryonic stem cell:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
8	CEBPB	chr13:65499086-65499360	HepG2	liver:	n/a	chr13:65499202-65499213
9	CEBPB	chr13:65423323-65423606	K562	blood:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
10	CEBPB	chr13:65449866-65450161	HepG2	liver:	n/a	chr13:65450034-65450043 chr13:65450033-65450044 chr13:65450032-65450045 chr13:65450032-65450045 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450032-65450043 chr13:65450032-65450045 chr13:65450032-65450043
11	CEBPB	chr13:65449858-65450171	IMR90	lung:	n/a	chr13:65450034-65450043 chr13:65450033-65450044 chr13:65450032-65450045 chr13:65450032-65450045 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450032-65450043 chr13:65450032-65450045 chr13:65450032-65450043
12	CEBPB	chr13:65423344-65423632	A549	lung:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
13	CEBPB	chr13:65549489-65549824	HepG2	liver:	n/a	chr13:65549674-65549685 chr13:65549616-65549627
14	CEBPB	chr13:65424220-65424578	A549	lung:	n/a	chr13:65424398-65424409
15	CEBPB	chr13:65463368-65463605	IMR90	lung:	n/a	n/a
16	CEBPB	chr13:65423288-65423653	Hela-S3	cervix:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
17	CEBPB	chr13:65424222-65424546	IMR90	lung:	n/a	chr13:65424398-65424409
18	CEBPB	chr13:65486134-65486601	A549	lung:	n/a	n/a
19	CEBPB	chr13:65423231-65423769	A549	lung:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
20	CEBPB	chr13:65424238-65424548	HepG2	liver:	n/a	chr13:65424398-65424409
21	CEBPB	chr13:65423279-65423659	IMR90	lung:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
22	CEBPB	chr13:65423282-65423649	HepG2	liver:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
23	CEBPB	chr13:65503142-65503716	IMR90	lung:	n/a	n/a
24	CEBPB	chr13:65423280-65423696	A549	lung:	n/a	chr13:65423466-65423479 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423477 chr13:65423468-65423479 chr13:65423466-65423479 chr13:65423466-65423477 chr13:65423468-65423477 chr13:65423466-65423479
25	CEBPB	chr13:65530999-65531037	HepG2	liver:	n/a	chr13:65531013-65531026 chr13:65531015-65531026 chr13:65531010-65531027 chr13:65531013-65531024 chr13:65531013-65531026
26	CEBPB	chr13:65449988-65450076	H1-hESC	embryonic stem cell:	n/a	chr13:65450034-65450043 chr13:65450033-65450044 chr13:65450032-65450045 chr13:65450032-65450045 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450034-65450043 chr13:65450032-65450043 chr13:65450032-65450045 chr13:65450032-65450043
27	CEBPB	chr13:65499086-65499312	A549	lung:	n/a	chr13:65499202-65499213
28	CHD1	chr13:65568223-65568415	GM12878	blood:	n/a	n/a
29	CHD2	chr13:65499635-65499713	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr13:65567966-65568470	GM12878	blood:	n/a	n/a
31	CTCF	chr13:65559841-65559911	Lung_OC	lung:	n/a	n/a
32	CTCF	chr13:65571720-65571870	NHDF-neo	bronchial:	n/a	n/a
33	CTCF	chr13:65571680-65571830	AG04450	lung:	n/a	n/a
34	CTCF	chr13:65460240-65460390	HCPEpiC	choroid plexus:	n/a	n/a
35	CTCF	chr13:65475340-65475433	NHEK	skin:	n/a	n/a
36	CTCF	chr13:65571760-65571910	HCPEpiC	choroid plexus:	n/a	n/a
37	CTCF	chr13:65571760-65571910	HPAF	blood vessel:	n/a	n/a
38	CTCF	chr13:65519280-65519430	HPAF	blood vessel:	n/a	chr13:65519402-65519423
39	CTCF	chr13:65519300-65519450	AG10803	skin:	n/a	chr13:65519402-65519423
40	CTCF	chr13:65519380-65519530	HMEC	breast:	n/a	chr13:65519402-65519423
41	CTCF	chr13:65434969-65435038	Lung_OC	lung:	n/a	n/a
42	CTCF	chr13:65519389-65519419	Hela-S3	cervix:	n/a	n/a
43	CTCF	chr13:65425332-65425390	GM20000	blood:	n/a	n/a
44	CTCF	chr13:65446280-65446290	ProgFib	skin:	n/a	n/a
45	CTCF	chr13:65571800-65571950	HMEC	breast:	n/a	n/a
46	CTCF	chr13:65499005-65499076	GM19238	blood:	n/a	n/a
47	CTCF	chr13:65571760-65571910	HMEC	breast:	n/a	n/a
48	CTCF	chr13:65571680-65571830	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr13:65571700-65571850	AoAF	blood vessel:	n/a	n/a
50	CTCF	chr13:65571800-65571950	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:65533139-65533189	Caco-2	colon:	n/a
2	chr13:65532408-65532458	HCM	heart:	n/a
3	chr13:65500072-65500122	HRE	kidney:	n/a
4	chr13:65500141-65500191	HL-60	blood:	n/a
5	chr13:65532820-65532870	T-47D	breast:	n/a
6	chr13:65500124-65500174	IMR90	lung:	fetal
7	chr13:65532408-65532458	HCF	heart:	n/a
8	chr13:65532581-65532631	SAEC	small airway:	n/a
9	chr13:65532820-65532870	AG10803	skin:	n/a
10	chr13:65532408-65532458	BE2_C	brain:	n/a
11	chr13:65532408-65532458	HMEC	breast:	n/a
12	chr13:65532581-65532631	CMK	blood:	n/a
13	chr13:65500072-65500122	BJ	skin:	n/a
14	chr13:65500072-65500122	HNPCEpiC	eye:	n/a
15	chr13:65500124-65500174	MCF10A-Er-Src	breast:	n/a
16	chr13:65532878-65532928	ProgFib	skin:	n/a
17	chr13:65532878-65532928	GM06990	blood:	n/a
18	chr13:65500072-65500122	MCF10A-Er-Src	breast:	n/a
19	chr13:65532581-65532631	AG09309	skin:	n/a
20	chr13:65532581-65532631	HCM	heart:	n/a
21	chr13:65532878-65532928	SK-N-SH	brain:	n/a
22	chr13:65500072-65500122	HEK293	kidney:	embryo
23	chr13:65532581-65532631	IMR90	lung:	fetal
24	chr13:65533139-65533189	AG04449	skin:	fetal
25	chr13:65500124-65500174	NH-A	brain:	n/a
26	chr13:65532273-65532323	H1-hESC	embryonic stem cell:	embryo
27	chr13:65500124-65500174	BJ	skin:	n/a
28	chr13:65532408-65532458	AG09319	gingival:	n/a
29	chr13:65533500-65533550	PANC-1	pancreas:	n/a
30	chr13:65532581-65532631	HEEpiC	esophagus:	n/a
31	chr13:65500124-65500174	GM12891	blood:	n/a
32	chr13:65500124-65500174	AG10803	skin:	n/a
33	chr13:65533139-65533189	HEEpiC	esophagus:	n/a
34	chr13:65533500-65533550	SK-N-MC	brain:	n/a
35	chr13:65532820-65532870	SAEC	small airway:	n/a
36	chr13:65532878-65532928	HCF	heart:	n/a
37	chr13:65500072-65500122	NHBE	bronchial:	n/a
38	chr13:65532408-65532458	GM06990	blood:	n/a
39	chr13:65532820-65532870	GM12892	blood:	n/a
40	chr13:65532796-65532846	ECC-1	luminal epithelium:	n/a
41	chr13:65533500-65533550	LNCaP	prostate:	n/a
42	chr13:65500072-65500122	HL-60	blood:	n/a
43	chr13:65533139-65533189	NT2-D1	testis:	n/a
44	chr13:65533139-65533189	HPAEpiC	pulmonary alveolar:	n/a
45	chr13:65532408-65532458	HepG2	liver:	n/a
46	chr13:65532820-65532870	NB4	blood:	n/a
47	chr13:65533139-65533189	PANC-1	pancreas:	n/a
48	chr13:65532796-65532846	HAEpiC	amniotic membrane:	n/a
49	chr13:65532408-65532458	LNCaP	prostate:	n/a
50	chr13:65532820-65532870	Jurkat	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr13:65452228..65453752-chr13:65456863..65459026,2	MCF-7	breast:
2	chr13:65501223..65502743-chr17:41399641..41401888,2	K562	blood:
3	chr13:65502724..65504224-chr17:41400395..41402648,2	MCF-7	breast:
4	chr13:65452228..65453752-chr13:65456863..65459026,2	MCF-7	breast:
5	chr13:65512386..65514959-chr13:65519104..65520898,2	K562	blood:
6	chr13:65490694..65491214-chr8:101576105..101576870,2	K562	blood:
7	chr13:65501243..65504224-chr17:41399641..41402005,2	K562	blood:
8	chr13:65512386..65514959-chr13:65519104..65520898,2	K562	blood:

Variant related genes	Relation type
LGMNP1	TF binding region
LGMNP1	CpG island

Extended variants
information (count: 1674 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:1674 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12584872	chr13:65423068-65423069	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs538332042	chr13:65423095-65423096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs538797436	chr13:65423143-65423144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs4884587	chr13:65423164-65423165	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs574935707	chr13:65423204-65423205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs534132790	chr13:65423216-65423217	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs554016527	chr13:65423257-65423258	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs187403422	chr13:65423277-65423278	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs569438130	chr13:65423279-65423280	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs149979489	chr13:65423386-65423387	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs146281667	chr13:65423487-65423488	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs564518383	chr13:65423497-65423498	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs372989148	chr13:65423599-65423600	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs575199298	chr13:65423612-65423613	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs544287934	chr13:65423621-65423622	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs74090106	chr13:65423634-65423635	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs190361877	chr13:65423655-65423656	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs546491225	chr13:65423660-65423661	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs183349938	chr13:65423755-65423756	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs532424105	chr13:65423789-65423790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs537290355	chr13:65423798-65423799	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs552550885	chr13:65423909-65423910	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs74090107	chr13:65423917-65423918	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs188677063	chr13:65423973-65423974	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs192780478	chr13:65424007-65424008	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs144132710	chr13:65424023-65424024	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs1022239	chr13:65424046-65424047	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs1567741	chr13:65424066-65424067	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs573648124	chr13:65424076-65424077	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs542832598	chr13:65424080-65424081	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs567297945	chr13:65424137-65424138	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs146489259	chr13:65424177-65424178	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs570740429	chr13:65424189-65424190	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs539742820	chr13:65424335-65424336	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs556481160	chr13:65424350-65424351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs534612988	chr13:65424434-65424435	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs575138787	chr13:65424471-65424472	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs149074092	chr13:65424482-65424483	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs374543859	chr13:65424499-65424500	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs373123794	chr13:65424557-65424558	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs201535819	chr13:65424586-65424587	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs142139800	chr13:65424622-65424623	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs79581259	chr13:65424641-65424642	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs555193110	chr13:65424658-65424659	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs182528028	chr13:65424665-65424666	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs61125878	chr13:65424695-65424696	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs546078454	chr13:65424700-65424701	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs151164648	chr13:65424711-65424712	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs78192727	chr13:65424730-65424731	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs75338101	chr13:65424731-65424732	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	17245344	CNVD
Prostate cancer	18632612	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Merkel cell carcinoma	19020549	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21858162	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Gastric cancer	17908304	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Breast cancer	17393978	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Colorectal cancer	16774939	CNVD
Adenoid cystic carcinoma	17372589	CNVD
abnormal development	18461090	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:65421600-65423600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr13:65422000-65423400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr13:65422000-65423400	Enhancers	Fetal Intestine Small	intestine
4	chr13:65422200-65423400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr13:65423400-65423800	Enhancers	Adipose Nuclei	Adipose
6	chr13:65423600-65424800	Enhancers	Fetal Lung	lung
7	chr13:65426400-65426800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr13:65428400-65430000	Enhancers	Placenta Amnion	Placenta Amnion
9	chr13:65432400-65432800	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr13:65435000-65436400	Enhancers	Liver	Liver
11	chr13:65440600-65441000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr13:65440600-65441000	Enhancers	Fetal Stomach	stomach
13	chr13:65443400-65443800	Enhancers	HUVEC	blood vessel
14	chr13:65443800-65445800	Weak transcription	HUVEC	blood vessel
15	chr13:65445800-65446200	Enhancers	HUVEC	blood vessel
16	chr13:65446200-65446400	ZNF genes & repeats	Pancreas	Pancrea
17	chr13:65446200-65446600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr13:65446600-65451400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr13:65451400-65451600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr13:65470000-65470400	Active TSS	Gastric	stomach
21	chr13:65474200-65474400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr13:65482800-65483800	Enhancers	HUVEC	blood vessel
23	chr13:65483000-65483400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr13:65483000-65483400	Enhancers	HMEC	breast
25	chr13:65483000-65483600	Enhancers	Muscle Satellite Cultured Cells	--
26	chr13:65483400-65484400	Weak transcription	HMEC	breast
27	chr13:65483400-65485600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr13:65483600-65485600	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr13:65483800-65485600	Weak transcription	HUVEC	blood vessel
30	chr13:65484400-65485000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr13:65484400-65487000	Enhancers	HMEC	breast
32	chr13:65485000-65485400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr13:65485400-65486200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr13:65485600-65485800	Enhancers	A549	lung
35	chr13:65485600-65486200	Enhancers	NHEK	skin
36	chr13:65485600-65487000	Enhancers	Muscle Satellite Cultured Cells	--
37	chr13:65485600-65487000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr13:65485600-65487000	Enhancers	HUVEC	blood vessel
39	chr13:65485600-65487200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr13:65485600-65487200	Enhancers	NH-A	brain
41	chr13:65485800-65486000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr13:65485800-65486000	Flanking Active TSS	A549	lung
43	chr13:65486000-65486400	Active TSS	A549	lung
44	chr13:65486200-65489000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr13:65486400-65486800	Enhancers	A549	lung
46	chr13:65486600-65486800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr13:65486800-65487000	Active TSS	A549	lung
48	chr13:65487000-65487600	Weak transcription	HUVEC	blood vessel
49	chr13:65487600-65487800	ZNF genes & repeats	HUVEC	blood vessel
50	chr13:65487800-65488000	Weak transcription	HUVEC	blood vessel

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links