Variant report

Variant nsv900372
Chromosome Location chr13:65449535-65577032
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:65446600-65451400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr13:65451400-65451600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:65470000-65470400 Active TSS Gastric stomach
4 chr13:65474200-65474400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr13:65482800-65483800 Enhancers HUVEC blood vessel
6 chr13:65483000-65483400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr13:65483000-65483400 Enhancers HMEC breast
8 chr13:65483000-65483600 Enhancers Muscle Satellite Cultured Cells --
9 chr13:65483400-65484400 Weak transcription HMEC breast
10 chr13:65483400-65485600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr13:65483600-65485600 Weak transcription Muscle Satellite Cultured Cells --
12 chr13:65483800-65485600 Weak transcription HUVEC blood vessel
13 chr13:65484400-65485000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr13:65484400-65487000 Enhancers HMEC breast
15 chr13:65485000-65485400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr13:65485400-65486200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr13:65485600-65485800 Enhancers A549 lung
18 chr13:65485600-65486200 Enhancers NHEK skin
19 chr13:65485600-65487000 Enhancers Muscle Satellite Cultured Cells --
20 chr13:65485600-65487000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr13:65485600-65487000 Enhancers HUVEC blood vessel
22 chr13:65485600-65487200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr13:65485600-65487200 Enhancers NH-A brain
24 chr13:65485800-65486000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr13:65485800-65486000 Flanking Active TSS A549 lung
26 chr13:65486000-65486400 Active TSS A549 lung
27 chr13:65486200-65489000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr13:65486400-65486800 Enhancers A549 lung
29 chr13:65486600-65486800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr13:65486800-65487000 Active TSS A549 lung
31 chr13:65487000-65487600 Weak transcription HUVEC blood vessel
32 chr13:65487600-65487800 ZNF genes & repeats HUVEC blood vessel
33 chr13:65487800-65488000 Weak transcription HUVEC blood vessel
34 chr13:65498600-65499000 Active TSS Gastric stomach
35 chr13:65499400-65499600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr13:65499400-65499800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr13:65499600-65502800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr13:65499800-65500000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
39 chr13:65500000-65500200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr13:65502400-65503400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr13:65502400-65503800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr13:65502400-65504400 Enhancers Placenta Amnion Placenta Amnion
43 chr13:65502600-65503800 Enhancers Muscle Satellite Cultured Cells --
44 chr13:65502800-65503000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr13:65502800-65503000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr13:65502800-65503000 Enhancers Hela-S3 cervix
47 chr13:65502800-65503200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr13:65502800-65503200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr13:65502800-65503200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr13:65502800-65503200 Enhancers HMEC breast

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